RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 DCDC5Q6ZRR9 648 aa16.52■□□□□ 0.24
PDZRN3-202ENST00000308537 ZDHHC22Q8N966 263 aa16.52■□□□□ 0.24
PDZRN3-202ENST00000308537 ZNF454Q8N9F8 522 aa16.52■□□□□ 0.24
PDZRN3-202ENST00000308537 OR5K1Q8NHB7 308 aa16.52■□□□□ 0.24
PDZRN3-202ENST00000308537 DNAJC9Q8WXX5 260 aa16.52■□□□□ 0.24
PDZRN3-202ENST00000308537 NEIL1Q96FI4 390 aaPredicted RBP16.52■□□□□ 0.24
PDZRN3-202ENST00000308537 LYZL4Q96KX0 146 aa16.52■□□□□ 0.24
PDZRN3-202ENST00000308537 FGF23Q9GZV9 251 aaPredicted RBP16.52■□□□□ 0.24
PDZRN3-202ENST00000308537 PAPOLBQ9NRJ5 636 aaKnown RBP16.52■□□□□ 0.24
PDZRN3-202ENST00000308537 RNF7Q9UBF6 113 aa16.52■□□□□ 0.24
PDZRN3-202ENST00000308537 IGHV2-70DA0A0C4DH43 119 aa16.51■□□□□ 0.23
PDZRN3-202ENST00000308537 TBX1O43435 398 aa16.51■□□□□ 0.23
PDZRN3-202ENST00000308537 PRKYO43930 277 aa16.51■□□□□ 0.23
PDZRN3-202ENST00000308537 MITFO75030 526 aaPredicted RBP16.51■□□□□ 0.23
PDZRN3-202ENST00000308537 EGR1P18146 543 aa16.51■□□□□ 0.23
PDZRN3-202ENST00000308537 HSD11B1P28845 292 aa16.51■□□□□ 0.23
PDZRN3-202ENST00000308537 GSK3AP49840 483 aa16.51■□□□□ 0.23
PDZRN3-202ENST00000308537 PTGES3Q15185 160 aaKnown RBP16.51■□□□□ 0.23
PDZRN3-202ENST00000308537 WDR25Q64LD2 544 aaPredicted RBP16.51■□□□□ 0.23
PDZRN3-202ENST00000308537 CCDC121Q6ZUS5 278 aa16.51■□□□□ 0.23
PDZRN3-202ENST00000308537 OR52H1Q8NGJ2 320 aa16.51■□□□□ 0.23
PDZRN3-202ENST00000308537 ZNF418Q8TF45 676 aaPredicted RBP16.51■□□□□ 0.23
PDZRN3-202ENST00000308537 C22orf15Q8WYQ4 148 aa16.51■□□□□ 0.23
PDZRN3-202ENST00000308537 FN3KRPQ9HA64 309 aa16.51■□□□□ 0.23
PDZRN3-202ENST00000308537 NOP16Q9Y3C1 178 aaKnown RBP16.51■□□□□ 0.23
PDZRN3-202ENST00000308537 AUP1Q9Y679 476 aa16.51■□□□□ 0.23
PDZRN3-202ENST00000308537 NBEAL1Q6ZS30 2694 aa16.51■□□□□ 0.23
PDZRN3-202ENST00000308537 C22orf46C9J442 243 aa16.5■□□□□ 0.23
PDZRN3-202ENST00000308537 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.5■□□□□ 0.23
PDZRN3-202ENST00000308537 LGALS8O00214 317 aa16.5■□□□□ 0.23
PDZRN3-202ENST00000308537 CIB2O75838 187 aa16.5■□□□□ 0.23
PDZRN3-202ENST00000308537 APOC1P02654 83 aa16.5■□□□□ 0.23
PDZRN3-202ENST00000308537 PITPNBP48739 271 aa16.5■□□□□ 0.23
PDZRN3-202ENST00000308537 PSMA6P60900 246 aaKnown RBP16.5■□□□□ 0.23
PDZRN3-202ENST00000308537 SCGB2A2Q13296 93 aa16.5■□□□□ 0.23
PDZRN3-202ENST00000308537 APOFQ13790 326 aa16.5■□□□□ 0.23
PDZRN3-202ENST00000308537 TIGD6Q17RP2 521 aa16.5■□□□□ 0.23
PDZRN3-202ENST00000308537 KDM4DQ6B0I6 523 aa16.5■□□□□ 0.23
PDZRN3-202ENST00000308537 LRRN1Q6UXK5 716 aa16.5■□□□□ 0.23
PDZRN3-202ENST00000308537 KRT74Q7RTS7 529 aa16.5■□□□□ 0.23
PDZRN3-202ENST00000308537 BCL6BQ8N143 479 aaPredicted RBP16.5■□□□□ 0.23
PDZRN3-202ENST00000308537 SPERTQ8NA61 448 aa16.5■□□□□ 0.23
PDZRN3-202ENST00000308537 OR11L1Q8NGX0 322 aa16.5■□□□□ 0.23
PDZRN3-202ENST00000308537 RAB40AQ8WXH6 277 aa16.5■□□□□ 0.23
PDZRN3-202ENST00000308537 ITPKCQ96DU7 683 aa16.5■□□□□ 0.23
PDZRN3-202ENST00000308537 ZNF48Q96MX3 618 aaPredicted RBP16.5■□□□□ 0.23
PDZRN3-202ENST00000308537 TEAD3Q99594 435 aa16.5■□□□□ 0.23
PDZRN3-202ENST00000308537 GABARAPL1Q9H0R8 117 aa16.5■□□□□ 0.23
PDZRN3-202ENST00000308537 TVP23BQ9NYZ1 205 aa16.5■□□□□ 0.23
PDZRN3-202ENST00000308537 ZNF69Q9UC07 566 aa16.5■□□□□ 0.23
PDZRN3-202ENST00000308537 OR5V1Q9UGF6 321 aa16.5■□□□□ 0.23
PDZRN3-202ENST00000308537 COPS3Q9UNS2 423 aa16.5■□□□□ 0.23
PDZRN3-202ENST00000308537 RHBDD3Q9Y3P4 386 aa16.5■□□□□ 0.23
PDZRN3-202ENST00000308537 KIR2DS1A0A191URI9 304 aa16.49■□□□□ 0.23
PDZRN3-202ENST00000308537 M0R129 80 aa16.49■□□□□ 0.23
PDZRN3-202ENST00000308537 H2BFMP0C1H6 154 aa16.49■□□□□ 0.23
PDZRN3-202ENST00000308537 PPIAL4GP0DN37 164 aa16.49■□□□□ 0.23
PDZRN3-202ENST00000308537 GNB2P62879 340 aa16.49■□□□□ 0.23
PDZRN3-202ENST00000308537 SNAPC1Q16533 368 aa16.49■□□□□ 0.23
PDZRN3-202ENST00000308537 SFRP4Q6FHJ7 346 aaPredicted RBP16.49■□□□□ 0.23
PDZRN3-202ENST00000308537 BCDIN3DQ7Z5W3 292 aaKnown RBP16.49■□□□□ 0.23
PDZRN3-202ENST00000308537 OR8B12Q8NGG6 310 aa16.49■□□□□ 0.23
PDZRN3-202ENST00000308537 OR8B3Q8NGG8 313 aa16.49■□□□□ 0.23
PDZRN3-202ENST00000308537 THEM6Q8WUY1 208 aa16.49■□□□□ 0.23
PDZRN3-202ENST00000308537 UPRTQ96BW1 309 aa16.49■□□□□ 0.23
PDZRN3-202ENST00000308537 C1orf147Q96MC9 270 aaPredicted RBP16.49■□□□□ 0.23
PDZRN3-202ENST00000308537 OR8B2Q96RD0 313 aa16.49■□□□□ 0.23
PDZRN3-202ENST00000308537 TLNRD1Q9H1K6 362 aa16.49■□□□□ 0.23
PDZRN3-202ENST00000308537 SMURF1Q9HCE7 757 aa16.49■□□□□ 0.23
PDZRN3-202ENST00000308537 BRD7Q9NPI1 651 aa16.49■□□□□ 0.23
PDZRN3-202ENST00000308537 C1orf123Q9NWV4 160 aa16.49■□□□□ 0.23
PDZRN3-202ENST00000308537 LRP12Q9Y561 859 aa16.49■□□□□ 0.23
PDZRN3-202ENST00000308537 ZAR1LA6NP61 321 aa16.48■□□□□ 0.23
PDZRN3-202ENST00000308537 EBAG9O00559 213 aa16.48■□□□□ 0.23
PDZRN3-202ENST00000308537 PHYHO14832 338 aa16.48■□□□□ 0.23
PDZRN3-202ENST00000308537 IGLV3-1P01715 115 aa16.48■□□□□ 0.23
PDZRN3-202ENST00000308537 IGHV4-38-2P0DP08 117 aa16.48■□□□□ 0.23
PDZRN3-202ENST00000308537 IRF2P14316 349 aa16.48■□□□□ 0.23
PDZRN3-202ENST00000308537 ESRRGP62508 458 aa16.48■□□□□ 0.23
PDZRN3-202ENST00000308537 CSNK2BP67870 215 aa16.48■□□□□ 0.23
PDZRN3-202ENST00000308537 AADACL4Q5VUY2 407 aa16.48■□□□□ 0.23
PDZRN3-202ENST00000308537 C1orf146Q5VVC0 180 aa16.48■□□□□ 0.23
PDZRN3-202ENST00000308537 SLX4IPQ5VYV7 408 aa16.48■□□□□ 0.23
PDZRN3-202ENST00000308537 TEX36Q5VZQ5 186 aa16.48■□□□□ 0.23
PDZRN3-202ENST00000308537 C12orf73Q69YU5 71 aa16.48■□□□□ 0.23
PDZRN3-202ENST00000308537 FAM90A1Q86YD7 464 aa16.48■□□□□ 0.23
PDZRN3-202ENST00000308537 YIPF3Q9GZM5 350 aa16.48■□□□□ 0.23
PDZRN3-202ENST00000308537 OR10A2Q9H208 303 aa16.48■□□□□ 0.23
PDZRN3-202ENST00000308537 RGCCQ9H4X1 137 aa16.48■□□□□ 0.23
PDZRN3-202ENST00000308537 SP140LQ9H930 580 aa16.48■□□□□ 0.23
PDZRN3-202ENST00000308537 FAM206AQ9NX38 181 aa16.48■□□□□ 0.23
PDZRN3-202ENST00000308537 NUP50Q9UKX7 468 aa16.48■□□□□ 0.23
PDZRN3-202ENST00000308537 SOX21Q9Y651 276 aaPredicted RBP16.48■□□□□ 0.23
PDZRN3-202ENST00000308537 OOEPA6NGQ2 149 aa16.47■□□□□ 0.23
PDZRN3-202ENST00000308537 ANKRD30BLA7E2S9 258 aa16.47■□□□□ 0.23
PDZRN3-202ENST00000308537 C3orf80F5H4A9 247 aa16.47■□□□□ 0.23
PDZRN3-202ENST00000308537 PLATP00750 562 aa16.47■□□□□ 0.23
PDZRN3-202ENST00000308537 GRPP07492 148 aa16.47■□□□□ 0.23
PDZRN3-202ENST00000308537 ELF3P78545 371 aaPredicted RBP16.47■□□□□ 0.23
PDZRN3-202ENST00000308537 ROM1Q03395 351 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms