RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 GDNFP39905 211 aa9.57□□□□□ -0.88
SYNPO2-201ENST00000307142 TOMM34Q15785 309 aaPredicted RBP9.57□□□□□ -0.88
SYNPO2-201ENST00000307142 SOWAHCQ53LP3 525 aaPredicted RBP9.57□□□□□ -0.88
SYNPO2-201ENST00000307142 BEX5Q5H9J7 111 aa9.57□□□□□ -0.88
SYNPO2-201ENST00000307142 IL34Q6ZMJ4 242 aa9.57□□□□□ -0.88
SYNPO2-201ENST00000307142 LACC1Q8IV20 430 aa9.57□□□□□ -0.88
SYNPO2-201ENST00000307142 CMTM2Q8TAZ6 248 aa9.57□□□□□ -0.88
SYNPO2-201ENST00000307142 NTMQ9P121 344 aa9.57□□□□□ -0.88
SYNPO2-201ENST00000307142 PRSS44E7EML9 344 aa9.57□□□□□ -0.88
SYNPO2-201ENST00000307142 TMPRSS2O15393 492 aa9.57□□□□□ -0.88
SYNPO2-201ENST00000307142 GDF9O60383 454 aa9.57□□□□□ -0.88
SYNPO2-201ENST00000307142 SULT1C4O75897 302 aa9.57□□□□□ -0.88
SYNPO2-201ENST00000307142 ATF1P18846 271 aa9.57□□□□□ -0.88
SYNPO2-201ENST00000307142 OR10AD1Q8NGE0 317 aa9.57□□□□□ -0.88
SYNPO2-201ENST00000307142 PTPMT1Q8WUK0 201 aaPredicted RBP9.57□□□□□ -0.88
SYNPO2-201ENST00000307142 ARL11Q969Q4 196 aa9.57□□□□□ -0.88
SYNPO2-201ENST00000307142 SLC35E1Q96K37 410 aa9.57□□□□□ -0.88
SYNPO2-201ENST00000307142 POFUT1Q9H488 388 aa9.57□□□□□ -0.88
SYNPO2-201ENST00000307142 SAP30LQ9HAJ7 183 aa9.57□□□□□ -0.88
SYNPO2-201ENST00000307142 A1L4Q6 167 aa9.57□□□□□ -0.88
SYNPO2-201ENST00000307142 LAX1Q8IWV1 398 aa9.57□□□□□ -0.88
SYNPO2-201ENST00000307142 SLC38A9Q8NBW4 561 aa9.57□□□□□ -0.88
SYNPO2-201ENST00000307142 FBXW5Q969U6 566 aa9.57□□□□□ -0.88
SYNPO2-201ENST00000307142 DOK1Q99704 481 aa9.57□□□□□ -0.88
SYNPO2-201ENST00000307142 A0A1W2PPV9 198 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 K7EPK0 472 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 ACOT8O14734 319 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 DDOSTP39656 456 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 HNRNPFP52597 415 aaKnown RBP9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 CLEC2AQ6UVW9 174 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 FAM71E2Q8N5Q1 922 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 OR10V1Q8NGI7 309 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 GUCD1Q96NT3 240 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 GPATCH2Q9NW75 528 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 CHST2Q9Y4C5 530 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 FITM1A5D6W6 292 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 SLC37A1P57057 533 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 NANOGP1Q8N7R0 232 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 RHOXF1Q8NHV9 184 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 MAFIPQ8WZ33 124 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 SAT2Q96F10 170 aaPredicted RBP9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 TSNAXQ99598 290 aaKnown RBP9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 FGF5P12034 268 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 THBS3P49746 956 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 GK2Q14410 553 aaPredicted RBP9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 OR13C5Q8NGS8 318 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 CXXC4Q9H2H0 198 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 SIAEQ9HAT2 523 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 SEC16AO15027 2179 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 CBLN3Q6UW01 205 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 OR2T35Q8NGX2 323 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 LRRC29Q8WV35 223 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 MEX3AA1L020 520 aaKnown RBP9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 ACSM1Q08AH1 577 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 PELI1Q96FA3 418 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 LIN37Q96GY3 246 aaPredicted RBP9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 SCNM1Q9BWG6 230 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 COMMD5Q9GZQ3 224 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 RAF1P04049 648 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 SPCS2Q15005 226 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 PRSS45Q7RTY3 260 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 NUFIP2Q7Z417 695 aaKnown RBP9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 OR1S2Q8NGQ3 325 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 GMPPAQ96IJ6 420 aaPredicted RBP9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 CMTM3Q96MX0 182 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 PPIL3Q9H2H8 161 aaKnown RBP9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 FOXJ2Q9P0K8 574 aa9.56□□□□□ -0.88
SYNPO2-201ENST00000307142 TRDV1A0A1B0GX56 115 aa9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 TMEM30CPA0ZSE6 113 aa9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 ADAM20O43506 726 aa9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 PRRX1P54821 245 aa9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 HTD2P86397 168 aa9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 ZNF141Q15928 474 aa9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 PDZD9Q8IXQ8 264 aa9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 MALSU1Q96EH3 234 aa9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 ISG20L2Q9H9L3 353 aaKnown RBP9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 CYSLTR2Q9NS75 346 aa9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 RAXQ9Y2V3 346 aa9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 AGPAT2O15120 278 aa9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 TPT1P13693 172 aaKnown RBP9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 ATF4P18848 351 aaPredicted RBP9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 THBS4P35443 961 aa9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 HIKESHIQ53FT3 197 aa9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 PARP16Q8N5Y8 322 aa9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 OR2B2Q9GZK3 357 aa9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 CPNE5Q9HCH3 593 aa9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 AMMECR1Q9Y4X0 333 aaPredicted RBP9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 ZAR1LA6NP61 321 aa9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 ALDH3B2P48448 385 aa9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 ZNF2Q9BSG1 426 aaPredicted RBP9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 TCRBV16S1A1N1A0A5B0 115 aa9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 ZNF205O95201 554 aa9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 SSX2Q16385 188 aa9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 ZNF528Q3MIS6 628 aa9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 Q8IYB0 196 aa9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 SSX3Q99909 188 aa9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 EXOSC3Q9NQT5 275 aaKnown RBP9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 PTTG1O95997 202 aa9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 MPGP29372 298 aa9.55□□□□□ -0.88
SYNPO2-201ENST00000307142 FAM26EQ8N5C1 309 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms