RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 ACTG1P63261 375 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 HGFACQ04756 655 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 RIPPLY1Q0D2K3 151 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 PMPCAQ10713 525 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 RNASE12Q5GAN4 147 aaKnown RBP9.23□□□□□ -0.93
CLP1-201ENST00000302731 SFRP5Q5T4F7 317 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 ZBTB37Q5TC79 503 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 AWAT2Q6E213 333 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 RPUSD3Q6P087 351 aaKnown RBP9.23□□□□□ -0.93
CLP1-201ENST00000302731 PLXDC2Q6UX71 529 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 Q6ZS92 163 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 P4HA3Q7Z4N8 544 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 PAQR4Q8N4S7 273 aaPredicted RBP9.23□□□□□ -0.93
CLP1-201ENST00000302731 KCNG3Q8TAE7 436 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 GPX8Q8TED1 209 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 AKAP1Q92667 903 aaKnown RBP eCLIP9.23□□□□□ -0.93
CLP1-201ENST00000302731 FAM46BQ96A09 425 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 SPSB4Q96A44 273 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 SPSB1Q96BD6 273 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 CPNE2Q96FN4 548 aaPredicted RBP9.23□□□□□ -0.93
CLP1-201ENST00000302731 CACNG6Q9BXT2 260 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 HRASLSQ9HDD0 168 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 KLK11Q9UBX7 282 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 PIGLQ9Y2B2 252 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 A0A0B4J293 547 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 RAB27BO00194 218 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 DHFRP00374 187 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 LPLP06858 475 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 CHRM2P08172 466 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 MELTFP08582 738 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 NAT2P11245 290 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 FAHP16930 419 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 UNC119Q13432 240 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 GUSBP1Q15486 140 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 OR8B8Q15620 311 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 TMEM42Q69YG0 159 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 TMEM53Q6P2H8 277 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 BTN2A1Q7KYR7 527 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 CPEB3Q8NE35 698 aaKnown RBP9.23□□□□□ -0.93
CLP1-201ENST00000302731 OR1K1Q8NGR3 316 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 NANOS1Q8WY41 292 aaKnown RBP9.23□□□□□ -0.93
CLP1-201ENST00000302731 WNT2BQ93097 391 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 C1orf147Q96MC9 270 aaPredicted RBP9.23□□□□□ -0.93
CLP1-201ENST00000302731 TECTBQ96PL2 329 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 KCNK15Q9H427 330 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 KLK13Q9UKR3 277 aa9.23□□□□□ -0.93
CLP1-201ENST00000302731 MRPS28Q9Y2Q9 187 aaKnown RBP9.23□□□□□ -0.93
CLP1-201ENST00000302731 ZNF292O60281 2723 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 FAM186AA6NE01 2351 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 hCG_38984A0A1B0GV85 526 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 AHRRA9YTQ3 701 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 CCNKO75909 580 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 IL18BPO95998 194 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 SERPINA5P05154 406 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 PRKACBP22694 351 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 GIFP27352 417 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 FOXG1P55316 489 aaPredicted RBP9.22□□□□□ -0.93
CLP1-201ENST00000302731 NHLH1Q02575 133 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 PLP2Q04941 152 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 CD300CQ08708 224 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 CNN3Q15417 329 aaKnown RBP9.22□□□□□ -0.93
CLP1-201ENST00000302731 SF3B4Q15427 424 aaKnown RBP eCLIP9.22□□□□□ -0.93
CLP1-201ENST00000302731 KISS1Q15726 138 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 UBE2V2Q15819 145 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 OR2A2Q6IF42 318 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 MTFR2Q6P444 385 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 GLIPR1L1Q6UWM5 242 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 FAM214BQ7L5A3 538 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 GLCCI1Q86VQ1 547 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 CCDC36Q8IYA8 594 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 OR6F1Q8NGZ6 308 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 OR56B4Q8NH76 319 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 AQP3Q92482 292 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 BCL2L2Q92843 193 aaPredicted RBP9.22□□□□□ -0.93
CLP1-201ENST00000302731 GCDHQ92947 438 aaPredicted RBP9.22□□□□□ -0.93
CLP1-201ENST00000302731 BOD1Q96IK1 185 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 GPER1Q99527 375 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 NKX3-1Q99801 234 aaPredicted RBP9.22□□□□□ -0.93
CLP1-201ENST00000302731 NUDT15Q9NV35 164 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 B3GNT2Q9NY97 397 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 PRSS50Q9UI38 385 aa9.22□□□□□ -0.93
CLP1-201ENST00000302731 GVINP1Q7Z2Y8 2422 aa9.21□□□□□ -0.93
CLP1-201ENST00000302731 A0A096LPE4 126 aa9.21□□□□□ -0.93
CLP1-201ENST00000302731 A0A1W2PPZ6 126 aa9.21□□□□□ -0.93
CLP1-201ENST00000302731 C7orf66A4D0T2 115 aa9.21□□□□□ -0.93
CLP1-201ENST00000302731 HLA-HP01893 362 aa9.21□□□□□ -0.93
CLP1-201ENST00000302731 PTHLHP12272 177 aa9.21□□□□□ -0.93
CLP1-201ENST00000302731 HOXB1P14653 301 aaPredicted RBP9.21□□□□□ -0.93
CLP1-201ENST00000302731 PSMB1P20618 241 aaKnown RBP9.21□□□□□ -0.93
CLP1-201ENST00000302731 ACKR3P25106 362 aa9.21□□□□□ -0.93
CLP1-201ENST00000302731 PTGFRP43088 359 aa9.21□□□□□ -0.93
CLP1-201ENST00000302731 RAB1AP62820 205 aa9.21□□□□□ -0.93
CLP1-201ENST00000302731 FAM3AP98173 230 aa9.21□□□□□ -0.93
CLP1-201ENST00000302731 TGFBR3Q03167 851 aa9.21□□□□□ -0.93
CLP1-201ENST00000302731 CARTPTQ16568 116 aa9.21□□□□□ -0.93
CLP1-201ENST00000302731 RSPO4Q2I0M5 234 aaPredicted RBP9.21□□□□□ -0.93
CLP1-201ENST00000302731 ZNF260Q3ZCT1 412 aa9.21□□□□□ -0.93
CLP1-201ENST00000302731 CLVS2Q5SYC1 327 aa9.21□□□□□ -0.93
CLP1-201ENST00000302731 OR10K2Q6IF99 312 aa9.21□□□□□ -0.93
CLP1-201ENST00000302731 CRIP3Q6Q6R5 217 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms