RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 MT-ND4P03905 459 aa19.39■□□□□ 0.69
SMAD1-201ENST00000302085 MPGP29372 298 aa19.39■□□□□ 0.69
SMAD1-201ENST00000302085 PMPCAQ10713 525 aa19.39■□□□□ 0.69
SMAD1-201ENST00000302085 SNTB2Q13425 540 aaKnown RBP19.39■□□□□ 0.69
SMAD1-201ENST00000302085 TNK1Q13470 666 aa19.39■□□□□ 0.69
SMAD1-201ENST00000302085 CRIP3Q6Q6R5 217 aa19.39■□□□□ 0.69
SMAD1-201ENST00000302085 SEMA6DQ8NFY4 1073 aa19.39■□□□□ 0.69
SMAD1-201ENST00000302085 C7orf50Q9BRJ6 194 aaKnown RBP19.39■□□□□ 0.69
SMAD1-201ENST00000302085 CHST5Q9GZS9 411 aa19.39■□□□□ 0.69
SMAD1-201ENST00000302085 CD79AP11912 226 aa19.38■□□□□ 0.69
SMAD1-201ENST00000302085 RANBP1P43487 201 aa19.38■□□□□ 0.69
SMAD1-201ENST00000302085 OR3A4PP47883 348 aa19.38■□□□□ 0.69
SMAD1-201ENST00000302085 MOGAT2Q3SYC2 334 aa19.38■□□□□ 0.69
SMAD1-201ENST00000302085 AWAT2Q6E213 333 aa19.38■□□□□ 0.69
SMAD1-201ENST00000302085 RBMXL3Q8N7X1 1067 aaKnown RBP19.38■□□□□ 0.69
SMAD1-201ENST00000302085 OR1K1Q8NGR3 316 aa19.38■□□□□ 0.69
SMAD1-201ENST00000302085 BCL2L2Q92843 193 aaPredicted RBP19.38■□□□□ 0.69
SMAD1-201ENST00000302085 C1QTNF5Q9BXJ0 243 aa19.38■□□□□ 0.69
SMAD1-201ENST00000302085 NPAP1Q9NZP6 1156 aa19.38■□□□□ 0.69
SMAD1-201ENST00000302085 FBLN5Q9UBX5 448 aa19.38■□□□□ 0.69
SMAD1-201ENST00000302085 MRPS28Q9Y2Q9 187 aaKnown RBP19.38■□□□□ 0.69
SMAD1-201ENST00000302085 ZFHX4Q86UP3 3567 aa19.38■□□□□ 0.69
SMAD1-201ENST00000302085 ECDO95905 644 aaPredicted RBP19.37■□□□□ 0.69
SMAD1-201ENST00000302085 PRSS12P56730 875 aa19.37■□□□□ 0.69
SMAD1-201ENST00000302085 GUCA2AQ02747 115 aa19.37■□□□□ 0.69
SMAD1-201ENST00000302085 GLIPR1L1Q6UWM5 242 aa19.37■□□□□ 0.69
SMAD1-201ENST00000302085 COLCA1Q6ZS62 124 aa19.37■□□□□ 0.69
SMAD1-201ENST00000302085 FGD2Q7Z6J4 655 aa19.37■□□□□ 0.69
SMAD1-201ENST00000302085 C1orf147Q96MC9 270 aaPredicted RBP19.37■□□□□ 0.69
SMAD1-201ENST00000302085 HRASLSQ9HDD0 168 aa19.37■□□□□ 0.69
SMAD1-201ENST00000302085 SPTBN2O15020 2390 aa19.37■□□□□ 0.69
SMAD1-201ENST00000302085 ANKRD20A5PA0PJZ0 165 aa19.37■□□□□ 0.69
SMAD1-201ENST00000302085 DHRS7CA6NNS2 312 aa19.37■□□□□ 0.69
SMAD1-201ENST00000302085 EDN3P14138 238 aa19.37■□□□□ 0.69
SMAD1-201ENST00000302085 GIFP27352 417 aa19.37■□□□□ 0.69
SMAD1-201ENST00000302085 ARR3P36575 388 aa19.37■□□□□ 0.69
SMAD1-201ENST00000302085 RAB1AP62820 205 aa19.37■□□□□ 0.69
SMAD1-201ENST00000302085 ZNF92Q03936 586 aa19.37■□□□□ 0.69
SMAD1-201ENST00000302085 GUSBP1Q15486 140 aa19.37■□□□□ 0.69
SMAD1-201ENST00000302085 GCNT2Q8N0V5 402 aa19.37■□□□□ 0.69
SMAD1-201ENST00000302085 NPRL2Q8WTW4 380 aa19.37■□□□□ 0.69
SMAD1-201ENST00000302085 ITFG2Q969R8 447 aa19.37■□□□□ 0.69
SMAD1-201ENST00000302085 TMEM14DPA8MWL7 114 aa19.36■□□□□ 0.69
SMAD1-201ENST00000302085 H7C417 338 aa19.36■□□□□ 0.69
SMAD1-201ENST00000302085 GSTT2BP0CG30 244 aa19.36■□□□□ 0.69
SMAD1-201ENST00000302085 COX5BP10606 129 aa19.36■□□□□ 0.69
SMAD1-201ENST00000302085 PRSS3P35030 304 aa19.36■□□□□ 0.69
SMAD1-201ENST00000302085 RIPPLY1Q0D2K3 151 aa19.36■□□□□ 0.69
SMAD1-201ENST00000302085 HIKESHIQ53FT3 197 aa19.36■□□□□ 0.69
SMAD1-201ENST00000302085 AKAP14Q86UN6 197 aa19.36■□□□□ 0.69
SMAD1-201ENST00000302085 FAM46BQ96A09 425 aa19.36■□□□□ 0.69
SMAD1-201ENST00000302085 CREB3L1Q96BA8 519 aa19.36■□□□□ 0.69
SMAD1-201ENST00000302085 CACNG6Q9BXT2 260 aa19.36■□□□□ 0.69
SMAD1-201ENST00000302085 DPAGT1Q9H3H5 408 aa19.36■□□□□ 0.69
SMAD1-201ENST00000302085 RGCCQ9H4X1 137 aa19.36■□□□□ 0.69
SMAD1-201ENST00000302085 MTFP1Q9UDX5 166 aa19.36■□□□□ 0.69
SMAD1-201ENST00000302085 ASPMQ8IZT6 3477 aa19.36■□□□□ 0.69
SMAD1-201ENST00000302085 LOC400499M0QZD8 3231 aa19.36■□□□□ 0.69
SMAD1-201ENST00000302085 A0A0A6YYH2 397 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 WIPF3A6NGB9 483 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 A6NJ64 397 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 INMT-MINDY4F8WBC2 141 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 GSK3AP49840 483 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 CCR6P51684 374 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 KISS1Q15726 138 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 TMEM255AQ5JRV8 349 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 C9orf106Q8NAJ2 232 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 ACBD4Q8NC06 268 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 GPER1Q99527 375 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 ZNF391Q9UJN7 358 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 hCG_38984A0A1B0GV85 526 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 METTL21EPA6NDL7 271 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 RAB27BO00194 218 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 GMDSO60547 372 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 RBBP9O75884 186 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 TCRBP04435 133 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 CCL2P13500 99 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 STOMP27105 288 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 AP3S2P59780 193 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 FAM3AP98173 230 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 TATDN3Q17R31 274 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 PLEKHN1Q494U1 663 aaPredicted RBP19.35■□□□□ 0.69
SMAD1-201ENST00000302085 TMEM53Q6P2H8 277 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 TFAP2EQ6VUC0 442 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 FAM214BQ7L5A3 538 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 SPACA3Q8IXA5 215 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 ZNF101Q8IZC7 436 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 WNT2BQ93097 391 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 RNF170Q96K19 258 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 GPR173Q9NS66 373 aa19.35■□□□□ 0.69
SMAD1-201ENST00000302085 SPSB4Q96A44 273 aa19.34■□□□□ 0.69
SMAD1-201ENST00000302085 LHX6Q9UPM6 363 aa19.34■□□□□ 0.69
SMAD1-201ENST00000302085 ALG5Q9Y673 324 aa19.34■□□□□ 0.69
SMAD1-201ENST00000302085 C5orf49A4QMS7 147 aa19.33■□□□□ 0.69
SMAD1-201ENST00000302085 AHRRA9YTQ3 701 aa19.33■□□□□ 0.69
SMAD1-201ENST00000302085 CCNOP22674 350 aa19.33■□□□□ 0.69
SMAD1-201ENST00000302085 RAB25P57735 213 aa19.33■□□□□ 0.69
SMAD1-201ENST00000302085 BTG1P62324 171 aa19.33■□□□□ 0.69
SMAD1-201ENST00000302085 ACSF3Q4G176 576 aaPredicted RBP19.33■□□□□ 0.69
SMAD1-201ENST00000302085 OR2W3Q7Z3T1 314 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms