RNA–Protein interactions for RNA: ENST00000296875.3

GDF9-201, Transcript of growth differentiation factor 9, humanhuman

TSL 5 BASIC

Gene GDF9, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9-201ENST00000296875 GSX2Q9BZM3 304 aa12.85□□□□□ -0.35
GDF9-201ENST00000296875 KLK13Q9UKR3 277 aa12.85□□□□□ -0.35
GDF9-201ENST00000296875 MCRIP1C9JLW8 97 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 LMX1BO60663 402 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 LRP3O75074 770 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 WDPCPO95876 746 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 RPA2P15927 270 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 CD34P28906 385 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 SLC6A9P48067 706 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 HIST1H3AP68431 136 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 SCRN3Q0VDG4 424 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 UNC119Q13432 240 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 HIST2H3PS2Q5TEC6 136 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 HIST2H3AQ71DI3 136 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 NAA40Q86UY6 237 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 C20orf196Q8IYI0 205 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 TMEM123Q8N131 208 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 ARRDC1Q8N5I2 433 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 OR52B4Q8NGK2 314 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 OR14L1PQ8NHC6 308 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 TAAR9Q96RI9 348 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 PHB2Q99623 299 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 TMEM9BQ9NQ34 198 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 ABI3Q9P2A4 366 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 KCNN3Q9UGI6 736 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 TCFL5Q9UL49 500 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 AUP1Q9Y679 476 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 KNTC1P50748 2209 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 ZNF814B7Z6K7 855 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 G3V3Q6 166 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 M0QYG6 137 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 SERPINA7P05543 415 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 FCER2P06734 321 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 ZNF35P13682 527 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 PRF1P14222 555 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 SSTR2P30874 369 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 CASRP41180 1078 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 AP2S1P53680 142 aaPredicted RBP12.84□□□□□ -0.35
GDF9-201ENST00000296875 PCBD1P61457 104 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 FAM27BQ5VT28 67 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 JMJD6Q6NYC1 403 aaPredicted RBP12.84□□□□□ -0.35
GDF9-201ENST00000296875 DRAM2Q6UX65 266 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 Q6ZSR3 168 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 SLC25A42Q86VD7 318 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 BEST3Q8N1M1 668 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 GPR137CQ8N3F9 429 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 GALNT16Q8N428 558 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 PAQR4Q8N4S7 273 aaPredicted RBP12.84□□□□□ -0.35
GDF9-201ENST00000296875 OR14K1Q8NGZ2 314 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 GAL3ST1Q99999 423 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 RBM24Q9BX46 236 aaKnown RBP12.84□□□□□ -0.35
GDF9-201ENST00000296875 TINAGL1Q9GZM7 467 aaPredicted RBP12.84□□□□□ -0.35
GDF9-201ENST00000296875 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.84□□□□□ -0.35
GDF9-201ENST00000296875 LOXL2Q9Y4K0 774 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 SESN1Q9Y6P5 492 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 V9GYS6 101 aa12.84□□□□□ -0.35
GDF9-201ENST00000296875 FAM186AA6NE01 2351 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 GVINP1Q7Z2Y8 2422 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 A0A0D9SG52 128 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 LOC101059948A0A1B0GTJ6 334 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 RFPL4AA6NLU0 287 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 RFPL4AL1F8VTS6 287 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 CDC14BO60729 498 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 CA11O75493 328 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 IGLV3-1P01715 115 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 HLA-AP01891 365 aaKnown RBP12.83□□□□□ -0.36
GDF9-201ENST00000296875 CELA2AP08217 269 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 CST2P09228 141 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 ZNF735P0CB33 412 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 HIST1H1DP16402 221 aaKnown RBP12.83□□□□□ -0.36
GDF9-201ENST00000296875 ECI1P42126 302 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 CARD18P57730 90 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 TAS2R46P59540 309 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 SRSF4Q08170 494 aaKnown RBP12.83□□□□□ -0.36
GDF9-201ENST00000296875 MFAP5Q13361 173 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 RAB35Q15286 201 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 MOGAT2Q3SYC2 334 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 ATPAF1Q5TC12 328 aaPredicted RBP12.83□□□□□ -0.36
GDF9-201ENST00000296875 TMEM164Q5U3C3 297 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 OR10K2Q6IF99 312 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 H3F3CQ6NXT2 135 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 RFPL4BQ6ZWI9 263 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 LYG2Q86SG7 212 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 CCDC28AQ8IWP9 274 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 SFXN2Q96NB2 322 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 SELENOIQ9C0D9 397 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 PLEK2Q9NYT0 353 aa12.83□□□□□ -0.36
GDF9-201ENST00000296875 FOXD3Q9UJU5 478 aaPredicted RBP12.83□□□□□ -0.36
GDF9-201ENST00000296875 BOKQ9UMX3 212 aaPredicted RBP12.83□□□□□ -0.36
GDF9-201ENST00000296875 NOP16Q9Y3C1 178 aaKnown RBP12.83□□□□□ -0.36
GDF9-201ENST00000296875 FXYD6-FXYD2A0A087WZ82 144 aa12.82□□□□□ -0.36
GDF9-201ENST00000296875 M0R135 149 aa12.82□□□□□ -0.36
GDF9-201ENST00000296875 TNFSF11O14788 317 aa12.82□□□□□ -0.36
GDF9-201ENST00000296875 GDF9O60383 454 aa12.82□□□□□ -0.36
GDF9-201ENST00000296875 MPIG6BO95866 241 aa12.82□□□□□ -0.36
GDF9-201ENST00000296875 HLA-GP17693 338 aa12.82□□□□□ -0.36
GDF9-201ENST00000296875 NAT1P18440 290 aa12.82□□□□□ -0.36
GDF9-201ENST00000296875 TCN2P20062 427 aa12.82□□□□□ -0.36
GDF9-201ENST00000296875 OTX1P32242 354 aaPredicted RBP12.82□□□□□ -0.36
GDF9-201ENST00000296875 OTX2P32243 289 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms