RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 RD3LP0DJH9 198 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 GABRA1P14867 456 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 GNB3P16520 340 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 AKR1C4P17516 323 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 CDAP32320 146 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 DLX5P56178 289 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 RAP2BP61225 183 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 DEFA5Q01523 94 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 LY6G6FQ5SQ64 297 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 ATPAF1Q5TC12 328 aaPredicted RBP11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 HLA-DQA1Q5Y7H0 255 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 RBMS3Q6XE24 437 aaKnown RBP11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 CLEC1AQ8NC01 280 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 STEAP2Q8NFT2 490 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 RPS4Y2Q8TD47 263 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 ZNF721Q8TF20 911 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 NPRL2Q8WTW4 380 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 PNPLA2Q96AD5 504 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 FGGYQ96C11 551 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 RHOVQ96L33 236 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 PRAF2O60831 178 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 OR2A4O95047 310 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 AHSA1O95433 338 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 AKAIN1P0CW23 69 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 DRD1P21728 446 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 HTR2CP28335 458 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 PRKXP51817 358 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 MPPED2Q15777 294 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 PTCRAQ6ISU1 281 aaPredicted RBP11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 SPNS3Q6ZMD2 512 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 ZNF546Q86UE3 836 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 BHLHE23Q8NDY6 225 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 OR1S1Q8NH92 325 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 OIT3Q8WWZ8 545 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 ADIPOR1Q96A54 375 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 OR2A7Q96R45 310 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 GPX7Q96SL4 187 aaPredicted RBP11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 C13orf42A0A1B0GVH6 325 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 LOC107986453A0A1B0GWG9 222 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 GDF9O60383 454 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 HLA-AP01891 365 aaKnown RBP11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 DTYMKP23919 212 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 DNASE1L1P49184 302 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 SLC25A1P53007 311 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 POU3F1Q03052 451 aaPredicted RBP11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 KIAA0895LQ68EN5 471 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 SLC22A25Q6T423 547 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 COMMD2Q86X83 199 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 ZNF679Q8IYX0 411 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 BPIFB2Q8N4F0 458 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 ADAD2Q8NCV1 583 aaKnown RBP11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 OR52N4Q8NGI2 321 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 OR5D18Q8NGL1 313 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 NICN1Q9BSH3 213 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 GHRLQ9UBU3 117 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 PRODH2Q9UF12 536 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 MRTO4Q9UKD2 239 aaKnown RBP11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 KCNIP3Q9Y2W7 256 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 LOC100289279A0A1B0GTE1 492 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 TMEM269A0A1B0GVZ9 245 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 NAP1L6A6NFF2 107 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 DLEU1O43261 78 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 ZNF749O43361 778 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 F12P00748 615 aaPredicted RBP11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 PPICP45877 212 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 ARL4DP49703 201 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 ATP1B3P54709 279 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 EBPQ15125 230 aaKnown RBP11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 SPICQ8N5J4 248 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 OR1L3Q8NH93 324 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 NEK7Q8TDX7 302 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 TCTN2Q96GX1 697 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 LAMA5O15230 3695 aa11.81□□□□□ -0.52
KCNIP3-201ENST00000295225 RPL27P61353 136 aaKnown RBP11.8□□□□□ -0.52
KCNIP3-201ENST00000295225 CXADRP78310 365 aa11.8□□□□□ -0.52
KCNIP3-201ENST00000295225 PMP22Q01453 160 aa11.8□□□□□ -0.52
KCNIP3-201ENST00000295225 CFHR1Q03591 330 aa11.8□□□□□ -0.52
KCNIP3-201ENST00000295225 IL10RAQ13651 578 aa11.8□□□□□ -0.52
KCNIP3-201ENST00000295225 BEST3Q8N1M1 668 aa11.8□□□□□ -0.52
KCNIP3-201ENST00000295225 FBXO17Q96EF6 278 aa11.8□□□□□ -0.52
KCNIP3-201ENST00000295225 SLC41A2Q96JW4 573 aa11.8□□□□□ -0.52
KCNIP3-201ENST00000295225 PACRGQ96M98 296 aaPredicted RBP11.8□□□□□ -0.52
KCNIP3-201ENST00000295225 SEC61A2Q9H9S3 476 aa11.8□□□□□ -0.52
KCNIP3-201ENST00000295225 MMP17Q9ULZ9 603 aa11.8□□□□□ -0.52
KCNIP3-201ENST00000295225 SRPX2O60687 465 aaPredicted RBP11.8□□□□□ -0.52
KCNIP3-201ENST00000295225 ZNF205O95201 554 aa11.8□□□□□ -0.52
KCNIP3-201ENST00000295225 PMP2P02689 132 aa11.8□□□□□ -0.52
KCNIP3-201ENST00000295225 DCNP07585 359 aaKnown RBP11.8□□□□□ -0.52
KCNIP3-201ENST00000295225 GP1BBP13224 206 aa11.8□□□□□ -0.52
KCNIP3-201ENST00000295225 CPN1P15169 458 aa11.8□□□□□ -0.52
KCNIP3-201ENST00000295225 GABRA4P48169 554 aa11.8□□□□□ -0.52
KCNIP3-201ENST00000295225 IGLV3-21P80748 117 aaPredicted RBP11.8□□□□□ -0.52
KCNIP3-201ENST00000295225 PMPCAQ10713 525 aa11.8□□□□□ -0.52
KCNIP3-201ENST00000295225 DHRS2Q13268 280 aa11.8□□□□□ -0.52
KCNIP3-201ENST00000295225 MFAP5Q13361 173 aa11.8□□□□□ -0.52
KCNIP3-201ENST00000295225 PRAMEF20Q5VT98 475 aa11.8□□□□□ -0.52
KCNIP3-201ENST00000295225 C1orf140Q5VVS0 124 aa11.8□□□□□ -0.52
KCNIP3-201ENST00000295225 SLC18B1Q6NT16 456 aa11.8□□□□□ -0.52
KCNIP3-201ENST00000295225 COX15Q7KZN9 410 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms