RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 MMP24Q9Y5R2 645 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 G3V3Q6 166 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 TRAF3IP2O43734 574 aaPredicted RBP13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 SUMO1P63165 101 aaKnown RBP13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 PRAMEF5Q5TYX0 476 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 PRAMEF6Q5VXH4 476 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 ANKRD16Q6P6B7 361 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 BTNL8Q6UX41 500 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 SSX7Q7RTT5 188 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 MARVELD1Q9BSK0 173 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 MMP26Q9NRE1 261 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 SLC17A2O00624 439 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 ZFPL1O95159 310 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 AGFG1P52594 562 aaKnown RBP13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 FAM219AQ8IW50 185 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 ZNF683Q8IZ20 524 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 GPX8Q8TED1 209 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 LINC00615Q96LM1 132 aaPredicted RBP13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 MOB1AQ9H8S9 216 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 SPINT2O43291 252 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 SLC25A6P12236 298 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 RFC3P40938 356 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 H3F3AP84243 136 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 IFITM3Q01628 133 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 MBTPS2O43462 519 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 IGF2P01344 180 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 UQCC3Q6UW78 93 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 ZNF687Q8N1G0 1237 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 GVQW1Q8N7I0 195 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 OTOSQ8NHW6 89 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 SLC39A7Q92504 469 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 LHX4Q969G2 390 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 POM121Q96HA1 1249 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 PLEKHA2Q9HB19 425 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 A0A0B4J2E0 115 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 UBE2L5PA0A1B0GUS4 154 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 A0A1B0GX12 115 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 ZNF320A2RRD8 509 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 GSTP1P09211 210 aaKnown RBP13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 ZNF816Q0VGE8 651 aaPredicted RBP13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 SRSF5Q13243 272 aaKnown RBP13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 MOGAT2Q3SYC2 334 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 RTN4IP1Q8WWV3 396 aaPredicted RBP13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 TMEM18Q96B42 140 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 ZNF331Q9NQX6 463 aaPredicted RBP13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 CTAG2O75638 210 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 TCN2P20062 427 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 CD96P40200 585 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 NCMAPQ5T1S8 102 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 OR2A2Q6IF42 318 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 GNPNAT1Q96EK6 184 aaPredicted RBP13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 PARD6AQ9NPB6 346 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 PLRG1O43660 514 aaKnown RBP13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 DUSP2Q05923 314 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 DHRS2Q13268 280 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 NCR3LG1Q68D85 454 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 ST3GAL6Q9Y274 331 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 TTC3P53804 2025 aa13.8□□□□□ -0.2
SHROOM4-201ENST00000289292 FAM157BP0CG42 384 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 CALCRP30988 508 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 HAAOP46952 286 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 OR8G1Q15617 311 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 NKAIN1Q4KMZ8 207 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 ZNF429Q86V71 674 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 KIAA1958Q8N8K9 716 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 UBALD1Q8TB05 177 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 TWSG1Q9GZX9 223 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 SCN1AP35498 2009 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 ARFGEF1Q9Y6D6 1849 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 FFAR1O14842 300 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 B4GALT1P15291 398 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 GNB1P62873 340 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 GUK1Q16774 197 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 ZNF485Q8NCK3 441 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 NAT6Q93015 286 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 SCMH1Q96GD3 660 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 ZC3HAV1LQ96H79 300 aaKnown RBP13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 A0A087WUJ7 227 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 A0A1W2PPH5 198 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 C9orf170A2RU37 121 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 LY86O95711 162 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 CER1O95813 267 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 EN2P19622 333 aaPredicted RBP13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 CBLN2Q8IUK8 224 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 C9orf62Q8N4C0 152 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 OR4D9Q8NGE8 314 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 C11orf40Q8WZ69 217 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 ARHGAP5-AS1Q96IT6 56 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 THOC3Q96J01 351 aaKnown RBP13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 TEX101Q9BY14 249 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 ZNF355PQ9NSJ1 428 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 DOCK5Q9H7D0 1870 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 KIR2DS1A0A191URI9 304 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 H3BMH7 237 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 GPR31O00270 319 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 KIR2DS4P43632 304 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 KIR2DS1Q14954 304 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 TMEM128Q5BJH2 165 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 NT5CQ8TCD5 201 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms