RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 PPP1R3CQ9UQK1 317 aa7.24□□□□□ -1.25
LIMD1-201ENST00000273317 BOLA1Q9Y3E2 137 aa7.24□□□□□ -1.25
LIMD1-201ENST00000273317 TIMM9Q9Y5J7 89 aa7.24□□□□□ -1.25
LIMD1-201ENST00000273317 RPA2P15927 270 aa7.24□□□□□ -1.25
LIMD1-201ENST00000273317 PPICP45877 212 aa7.24□□□□□ -1.25
LIMD1-201ENST00000273317 Q1RN00 199 aa7.24□□□□□ -1.25
LIMD1-201ENST00000273317 GPR119Q8TDV5 335 aa7.24□□□□□ -1.25
LIMD1-201ENST00000273317 SLCO4A1Q96BD0 722 aa7.24□□□□□ -1.25
LIMD1-201ENST00000273317 NOL4LQ96MY1 436 aaPredicted RBP7.24□□□□□ -1.25
LIMD1-201ENST00000273317 CTSFQ9UBX1 484 aa7.24□□□□□ -1.25
LIMD1-201ENST00000273317 GRPP07492 148 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 STAG3L2P0CL84 134 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 FPR2P25090 351 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 TRMT12Q53H54 448 aaKnown RBP7.23□□□□□ -1.25
LIMD1-201ENST00000273317 GLDNQ6ZMI3 551 aaPredicted RBP7.23□□□□□ -1.25
LIMD1-201ENST00000273317 RPUSD4Q96CM3 377 aaKnown RBP7.23□□□□□ -1.25
LIMD1-201ENST00000273317 ZMAT3Q9HA38 289 aaKnown RBP7.23□□□□□ -1.25
LIMD1-201ENST00000273317 SLC23A1Q9UHI7 598 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 CCSO14618 274 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 FUT6P51993 359 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 RHOUQ7L0Q8 258 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 BCDIN3DQ7Z5W3 292 aaKnown RBP7.23□□□□□ -1.25
LIMD1-201ENST00000273317 AMIGO3Q86WK7 504 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 KMT5CQ86Y97 462 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 CDCP1Q9H5V8 836 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 PRKRAO75569 313 aaKnown RBP7.23□□□□□ -1.25
LIMD1-201ENST00000273317 EPXP11678 715 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 RAG2P55895 527 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 SMAD2Q15796 467 aaKnown RBP7.23□□□□□ -1.25
LIMD1-201ENST00000273317 NKAIN1Q4KMZ8 207 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 LIPNQ5VXI9 398 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 CPEB2Q7Z5Q1 589 aaKnown RBP7.23□□□□□ -1.25
LIMD1-201ENST00000273317 TMEM104Q8NE00 496 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 POM121Q96HA1 1249 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 SDF2Q99470 211 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 UCK1Q9HA47 277 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 KLF13Q9Y2Y9 288 aaPredicted RBP7.23□□□□□ -1.25
LIMD1-201ENST00000273317 ZNF195O14628 629 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 ADAM11O75078 769 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 FABP5Q01469 135 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 TMEM128Q5BJH2 165 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 CLLU1Q5K131 121 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 TEX261Q6UWH6 196 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 PP6455Q8WZ26 134 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 MVB12AQ96EY5 273 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 CTDSP1Q9GZU7 261 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 AAMDCQ9H7C9 122 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 HDGFL3Q9Y3E1 203 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 U3KQ87 197 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 YIF1AO95070 293 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 THBS4P35443 961 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 SPANXN5Q5MJ07 72 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 SPICQ8N5J4 248 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 ELSPBP1Q96BH3 223 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 CCL26Q9Y258 94 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 LRP5O75197 1615 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 IKZF5Q9H5V7 419 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 UBE2L5PA0A1B0GUS4 154 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 PCSK6P29122 969 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 ADPRHP54922 357 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 IGFBP7Q16270 282 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 FA2HQ7L5A8 372 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 POM121L2Q96KW2 1035 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 PROCRQ9UNN8 238 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 FREM3P0C091 2139 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 SERTM2A0A1B0GWG4 89 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 CLEC18AA5D8T8 446 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 NAT1P18440 290 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 SNRPNP63162 240 aaKnown RBP7.23□□□□□ -1.25
LIMD1-201ENST00000273317 CLEC18CQ8NCF0 446 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 OR4C16Q8NGL9 310 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 ADIPOR1Q96A54 375 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 OCIAD1Q9NX40 245 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 PGA3P0DJD8 388 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 CCR5P51681 352 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 C11orf42Q8N5U0 333 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 OR2A1Q8NGT9 310 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 PRO1933Q9H354 126 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 RCL1Q9Y2P8 373 aaKnown RBP7.23□□□□□ -1.25
LIMD1-201ENST00000273317 NUMBLQ9Y6R0 609 aa7.23□□□□□ -1.25
LIMD1-201ENST00000273317 QDPRP09417 244 aa7.22□□□□□ -1.25
LIMD1-201ENST00000273317 USF1P22415 310 aaPredicted RBP7.22□□□□□ -1.25
LIMD1-201ENST00000273317 FXNQ16595 210 aa7.22□□□□□ -1.25
LIMD1-201ENST00000273317 PRSS45Q7RTY3 260 aa7.22□□□□□ -1.25
LIMD1-201ENST00000273317 TMEFF1Q8IYR6 380 aa7.22□□□□□ -1.25
LIMD1-201ENST00000273317 BAHD1Q8TBE0 780 aaPredicted RBP7.22□□□□□ -1.25
LIMD1-201ENST00000273317 APOBEC3DQ96AK3 386 aaPredicted RBP7.22□□□□□ -1.25
LIMD1-201ENST00000273317 DBX1A6NMT0 343 aa7.22□□□□□ -1.25
LIMD1-201ENST00000273317 SOX15O60248 233 aa7.22□□□□□ -1.25
LIMD1-201ENST00000273317 ARNTP27540 789 aa7.22□□□□□ -1.25
LIMD1-201ENST00000273317 RPL34P49207 117 aaKnown RBP7.22□□□□□ -1.25
LIMD1-201ENST00000273317 PTTG1IPP53801 180 aa7.22□□□□□ -1.25
LIMD1-201ENST00000273317 OR2B8PP59922 312 aa7.22□□□□□ -1.25
LIMD1-201ENST00000273317 RPEL1Q2QD12 228 aa7.22□□□□□ -1.25
LIMD1-201ENST00000273317 CLEC9AQ6UXN8 241 aa7.22□□□□□ -1.25
LIMD1-201ENST00000273317 C17orf107Q6ZR85 190 aa7.22□□□□□ -1.25
LIMD1-201ENST00000273317 PAQR9Q6ZVX9 377 aa7.22□□□□□ -1.25
LIMD1-201ENST00000273317 TMEM130Q8N3G9 435 aa7.22□□□□□ -1.25
LIMD1-201ENST00000273317 ERGIC1Q969X5 290 aa7.22□□□□□ -1.25
LIMD1-201ENST00000273317 AKR1E2Q96JD6 320 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms