RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 FAHP16930 419 aa14.51□□□□□ -0.09
CCDC40-201ENST00000269318 OR3A4PP47883 348 aa14.51□□□□□ -0.09
CCDC40-201ENST00000269318 HTR5AP47898 357 aa14.51□□□□□ -0.09
CCDC40-201ENST00000269318 ARF1P84077 181 aaKnown RBP14.51□□□□□ -0.09
CCDC40-201ENST00000269318 CLN3Q13286 438 aa14.51□□□□□ -0.09
CCDC40-201ENST00000269318 ZFP69Q49AA0 526 aa14.51□□□□□ -0.09
CCDC40-201ENST00000269318 RAB12Q6IQ22 244 aa14.51□□□□□ -0.09
CCDC40-201ENST00000269318 TCTE3Q8IZS6 198 aa14.51□□□□□ -0.09
CCDC40-201ENST00000269318 ACBD4Q8NC06 268 aa14.51□□□□□ -0.09
CCDC40-201ENST00000269318 LDAHQ9H6V9 325 aa14.51□□□□□ -0.09
CCDC40-201ENST00000269318 MRPS28Q9Y2Q9 187 aaKnown RBP14.51□□□□□ -0.09
CCDC40-201ENST00000269318 DHRS7CA6NNS2 312 aa14.51□□□□□ -0.09
CCDC40-201ENST00000269318 FARS2O95363 451 aaKnown RBP14.51□□□□□ -0.09
CCDC40-201ENST00000269318 PMP22Q01453 160 aa14.51□□□□□ -0.09
CCDC40-201ENST00000269318 RTP5Q14D33 572 aa14.51□□□□□ -0.09
CCDC40-201ENST00000269318 UBE2V2Q15819 145 aa14.51□□□□□ -0.09
CCDC40-201ENST00000269318 GLIPR1L1Q6UWM5 242 aa14.51□□□□□ -0.09
CCDC40-201ENST00000269318 OR2W3Q7Z3T1 314 aa14.51□□□□□ -0.09
CCDC40-201ENST00000269318 CDH24Q86UP0 819 aa14.51□□□□□ -0.09
CCDC40-201ENST00000269318 AQP3Q92482 292 aa14.51□□□□□ -0.09
CCDC40-201ENST00000269318 FAM46BQ96A09 425 aa14.51□□□□□ -0.09
CCDC40-201ENST00000269318 RNF170Q96K19 258 aa14.51□□□□□ -0.09
CCDC40-201ENST00000269318 FLVCR2Q9UPI3 526 aa14.51□□□□□ -0.09
CCDC40-201ENST00000269318 PIGLQ9Y2B2 252 aa14.51□□□□□ -0.09
CCDC40-201ENST00000269318 MEIS3P1A6NDR6 274 aa14.5□□□□□ -0.09
CCDC40-201ENST00000269318 ZNF587BE7ETH6 402 aa14.5□□□□□ -0.09
CCDC40-201ENST00000269318 FOXG1P55316 489 aaPredicted RBP14.5□□□□□ -0.09
CCDC40-201ENST00000269318 LINC00303Q3SY05 128 aa14.5□□□□□ -0.09
CCDC40-201ENST00000269318 ZNF260Q3ZCT1 412 aa14.5□□□□□ -0.09
CCDC40-201ENST00000269318 OR4C16Q8NGL9 310 aa14.5□□□□□ -0.09
CCDC40-201ENST00000269318 GIMAP1Q8WWP7 306 aa14.5□□□□□ -0.09
CCDC40-201ENST00000269318 APH1AQ96BI3 265 aa14.5□□□□□ -0.09
CCDC40-201ENST00000269318 NUDT16L1Q9BRJ7 211 aaKnown RBP14.5□□□□□ -0.09
CCDC40-201ENST00000269318 ZMAT3Q9HA38 289 aaKnown RBP14.5□□□□□ -0.09
CCDC40-201ENST00000269318 ELF5Q9UKW6 265 aaPredicted RBP14.5□□□□□ -0.09
CCDC40-201ENST00000269318 ASPMQ8IZT6 3477 aa14.5□□□□□ -0.09
CCDC40-201ENST00000269318 PEX14O75381 377 aa14.49□□□□□ -0.09
CCDC40-201ENST00000269318 TGM6O95932 706 aa14.49□□□□□ -0.09
CCDC40-201ENST00000269318 ACKR3P25106 362 aa14.49□□□□□ -0.09
CCDC40-201ENST00000269318 FAUP35544 74 aaKnown RBP14.49□□□□□ -0.09
CCDC40-201ENST00000269318 ACTBP60709 375 aa14.49□□□□□ -0.09
CCDC40-201ENST00000269318 ACTG1P63261 375 aa14.49□□□□□ -0.09
CCDC40-201ENST00000269318 CHMP1BQ7LBR1 199 aa14.49□□□□□ -0.09
CCDC40-201ENST00000269318 NUFIP2Q7Z417 695 aaKnown RBP14.49□□□□□ -0.09
CCDC40-201ENST00000269318 TMEM104Q8NE00 496 aa14.49□□□□□ -0.09
CCDC40-201ENST00000269318 CPEB3Q8NE35 698 aaKnown RBP14.49□□□□□ -0.09
CCDC40-201ENST00000269318 OR4D10Q8NGI6 311 aa14.49□□□□□ -0.09
CCDC40-201ENST00000269318 OR2AE1Q8NHA4 323 aa14.49□□□□□ -0.09
CCDC40-201ENST00000269318 REEP6Q96HR9 211 aa14.49□□□□□ -0.09
CCDC40-201ENST00000269318 OR51J1Q9H342 316 aa14.49□□□□□ -0.09
CCDC40-201ENST00000269318 TP63Q9H3D4 680 aaPredicted RBP14.49□□□□□ -0.09
CCDC40-201ENST00000269318 MOV10Q9HCE1 1003 aaKnown RBP14.49□□□□□ -0.09
CCDC40-201ENST00000269318 NKIRAS2Q9NYR9 191 aa14.49□□□□□ -0.09
CCDC40-201ENST00000269318 CNOT1A5YKK6 2376 aaKnown RBP14.49□□□□□ -0.09
CCDC40-201ENST00000269318 DNAJC13O75165 2243 aa14.49□□□□□ -0.09
CCDC40-201ENST00000269318 NDUFB6O95139 128 aa14.49□□□□□ -0.09
CCDC40-201ENST00000269318 LCATP04180 440 aa14.49□□□□□ -0.09
CCDC40-201ENST00000269318 GTF2F2P13984 249 aa14.49□□□□□ -0.09
CCDC40-201ENST00000269318 GSK3AP49840 483 aa14.49□□□□□ -0.09
CCDC40-201ENST00000269318 KISS1Q15726 138 aa14.49□□□□□ -0.09
CCDC40-201ENST00000269318 DMRTC1Q5HYR2 192 aa14.49□□□□□ -0.09
CCDC40-201ENST00000269318 PABPC1L2AQ5JQF8 200 aa14.49□□□□□ -0.09
CCDC40-201ENST00000269318 ZNF101Q8IZC7 436 aa14.49□□□□□ -0.09
CCDC40-201ENST00000269318 CMBLQ96DG6 245 aa14.49□□□□□ -0.09
CCDC40-201ENST00000269318 ZNF486Q96H40 463 aaPredicted RBP14.49□□□□□ -0.09
CCDC40-201ENST00000269318 LPAR5Q9H1C0 372 aa14.49□□□□□ -0.09
CCDC40-201ENST00000269318 ATPIF1Q9UII2 106 aa14.49□□□□□ -0.09
CCDC40-201ENST00000269318 ZFHX4Q86UP3 3567 aa14.48□□□□□ -0.09
CCDC40-201ENST00000269318 RTTNQ86VV8 2226 aa14.48□□□□□ -0.09
CCDC40-201ENST00000269318 TMEM235A6NFC5 223 aa14.48□□□□□ -0.09
CCDC40-201ENST00000269318 ZNF891A8MT65 544 aaPredicted RBP14.48□□□□□ -0.09
CCDC40-201ENST00000269318 ICMTO60725 284 aa14.48□□□□□ -0.09
CCDC40-201ENST00000269318 CEACAM4O75871 244 aa14.48□□□□□ -0.09
CCDC40-201ENST00000269318 SCGNO76038 276 aa14.48□□□□□ -0.09
CCDC40-201ENST00000269318 IGHG3P01860 377 aa14.48□□□□□ -0.09
CCDC40-201ENST00000269318 MELTFP08582 738 aa14.48□□□□□ -0.09
CCDC40-201ENST00000269318 AKAIN1P0CW23 69 aa14.48□□□□□ -0.09
CCDC40-201ENST00000269318 ALDH3B1P43353 468 aa14.48□□□□□ -0.09
CCDC40-201ENST00000269318 TNK1Q13470 666 aa14.48□□□□□ -0.09
CCDC40-201ENST00000269318 FCN2Q15485 313 aa14.48□□□□□ -0.09
CCDC40-201ENST00000269318 ST3GAL2Q16842 350 aa14.48□□□□□ -0.09
CCDC40-201ENST00000269318 C9orf135Q5VTT2 229 aa14.48□□□□□ -0.09
CCDC40-201ENST00000269318 MCEMP1Q8IX19 187 aa14.48□□□□□ -0.09
CCDC40-201ENST00000269318 SEMA6DQ8NFY4 1073 aa14.48□□□□□ -0.09
CCDC40-201ENST00000269318 IRF2BPLQ9H1B7 796 aa14.48□□□□□ -0.09
CCDC40-201ENST00000269318 MED28Q9H204 178 aa14.48□□□□□ -0.09
CCDC40-201ENST00000269318 OR10A4Q9H209 315 aa14.48□□□□□ -0.09
CCDC40-201ENST00000269318 NOX3Q9HBY0 568 aa14.48□□□□□ -0.09
CCDC40-201ENST00000269318 B3GNT2Q9NY97 397 aa14.48□□□□□ -0.09
CCDC40-201ENST00000269318 A0A0A6YYD4 124 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 CDC14BO60729 498 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 CD3DP04234 171 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 UBBP0CG47 229 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 NAT2P11245 290 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 VEGFCP49767 419 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 MECP2P51608 486 aaKnown RBP14.47□□□□□ -0.09
CCDC40-201ENST00000269318 DEFB109BQ30KR1 87 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 CD276Q5ZPR3 534 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 Q6ZTK2 550 aa14.47□□□□□ -0.09
CCDC40-201ENST00000269318 GABRG1Q8N1C3 465 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms