RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 LILRB1Q8NHL6 650 aaPredicted RBP10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 RNF128Q8TEB7 428 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 RRNAD1Q96FB5 475 aaKnown RBP10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 OR8B4Q96RC9 309 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 OCSTAMPQ9BR26 566 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 RBM24Q9BX46 236 aaKnown RBP10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 LHX9Q9NQ69 397 aa10.35□□□□□ -0.75
CLSTN3-201ENST00000266546 A8MVM7 634 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 ZNF705FA8MVS1 300 aaPredicted RBP10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 MT-ND4LP03901 98 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 OPN1LWP04000 364 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 ZNF705DP0CH99 300 aaPredicted RBP10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 ZNF705BP0CI00 300 aaPredicted RBP10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 TMIGD3P0DMS9 266 aaPredicted RBP10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 VSIG10L2P0DP72 767 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 BEND4Q6ZU67 534 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 OR1S1Q8NH92 325 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 ZNF681Q96N22 645 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 NXF5Q9H1B4 397 aaKnown RBP10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 FKRPQ9H9S5 495 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 TMEM272A0A1B0GTI8 110 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 C9orf170A2RU37 121 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 ZFAND5O76080 213 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 HBE1P02100 147 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 ZGLP1P0C6A0 271 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 SMIM6P0DI80 62 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 ZNF728P0DKX0 622 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 SLC2A1P11166 492 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 CD96P40200 585 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 PPICP45877 212 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 SLC25A1P53007 311 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 RAB1AP62820 205 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 C1orf140Q5VVS0 124 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 CMTM1Q8IZ96 169 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 OTOSQ8NHW6 89 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 HSD17B8Q92506 261 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 OR5B2Q96R09 309 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 NUDT9Q9BW91 350 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 CHST6Q9GZX3 395 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 GAR1Q9NY12 217 aaKnown RBP10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 PLEK2Q9NYT0 353 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 PIGBOS1A0A0B4J2F0 54 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 NKX2-2O95096 273 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 IGHG1P01857 330 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 FGF2P09038 288 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 FCGR2AP12318 317 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 EPHA1P21709 976 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 CDKN2AP42771 156 aaKnown RBP10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 PPP1CAP62136 330 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 ARF1P84077 181 aaKnown RBP10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 ATPAF1Q5TC12 328 aaPredicted RBP10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 RPUSD3Q6P087 351 aaKnown RBP10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 GLRX5Q86SX6 157 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 MISPQ8IVT2 679 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 OR13C8Q8NGS7 320 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 ADAT1Q9BUB4 502 aaKnown RBP10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 ABHD6Q9BV23 337 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 MED9Q9NWA0 146 aa10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 PTRH2Q9Y3E5 179 aaKnown RBP10.34□□□□□ -0.75
CLSTN3-201ENST00000266546 PRSS37A4D1T9 235 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 MSTNO14793 375 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 GLI4P10075 376 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 ENPP1P22413 925 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 CORO6Q6QEF8 472 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 CLEC1AQ8NC01 280 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 OR52N5Q8NH56 324 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 SPTSSAQ969W0 71 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 PGLYRP3Q96LB9 341 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 SHARPINQ9H0F6 387 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 KCNK15Q9H427 330 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 TMEM9BQ9NQ34 198 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 ST8SIA3O43173 380 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 BPNT1O95861 308 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 LCATP04180 440 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 SERPINE2P07093 398 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 NAT2P11245 290 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 DPP4P27487 766 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 CCL7P80098 99 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 DCAF12Q5T6F0 453 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 PUSL1Q8N0Z8 303 aaKnown RBP10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 CCDC54Q8NEL0 328 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 C16orf52Q8NHV5 167 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 FRZBQ92765 325 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 EMG1Q92979 244 aaKnown RBP10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 MALSU1Q96EH3 234 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 LOXL4Q96JB6 756 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 GPR27Q9NS67 375 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 KLHL13Q9P2N7 655 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 MRM2Q9UI43 246 aaKnown RBP10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 B9D1Q9UPM9 204 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 PIEZO1Q92508 2521 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 CYR61O00622 381 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 DUS4LO95620 317 aaKnown RBP10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 TXNDC12O95881 172 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 FOLR3P41439 243 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 ECI1P42126 302 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 BIDP55957 195 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 RPL23AP62750 156 aaKnown RBP10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 TLE4Q04727 773 aa10.33□□□□□ -0.76
CLSTN3-201ENST00000266546 C5orf46Q6UWT4 87 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms