RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 PITPNBP48739 271 aa13.42□□□□□ -0.26
USE1-201ENST00000263897 GSK3AP49840 483 aa13.42□□□□□ -0.26
USE1-201ENST00000263897 RASSF2P50749 326 aa13.42□□□□□ -0.26
USE1-201ENST00000263897 DAPP51397 102 aa13.42□□□□□ -0.26
USE1-201ENST00000263897 FAHD1Q6P587 224 aa13.42□□□□□ -0.26
USE1-201ENST00000263897 LRRN1Q6UXK5 716 aa13.42□□□□□ -0.26
USE1-201ENST00000263897 ZNF841Q6ZN19 808 aa13.42□□□□□ -0.26
USE1-201ENST00000263897 BPIFB2Q8N4F0 458 aa13.42□□□□□ -0.26
USE1-201ENST00000263897 C19orf18Q8NEA5 215 aa13.42□□□□□ -0.26
USE1-201ENST00000263897 BBS1Q8NFJ9 593 aa13.42□□□□□ -0.26
USE1-201ENST00000263897 OR5K1Q8NHB7 308 aa13.42□□□□□ -0.26
USE1-201ENST00000263897 C22orf15Q8WYQ4 148 aa13.42□□□□□ -0.26
USE1-201ENST00000263897 DACT3Q96B18 629 aaPredicted RBP13.42□□□□□ -0.26
USE1-201ENST00000263897 SLC6A7Q99884 636 aa13.42□□□□□ -0.26
USE1-201ENST00000263897 OR10A2Q9H208 303 aa13.42□□□□□ -0.26
USE1-201ENST00000263897 BRD7Q9NPI1 651 aa13.42□□□□□ -0.26
USE1-201ENST00000263897 PAPOLBQ9NRJ5 636 aaKnown RBP13.42□□□□□ -0.26
USE1-201ENST00000263897 C14orf119Q9NWQ9 140 aa13.42□□□□□ -0.26
USE1-201ENST00000263897 C1orf123Q9NWV4 160 aa13.42□□□□□ -0.26
USE1-201ENST00000263897 TVP23BQ9NYZ1 205 aa13.42□□□□□ -0.26
USE1-201ENST00000263897 NUP50Q9UKX7 468 aa13.42□□□□□ -0.26
USE1-201ENST00000263897 KIR2DS1A0A191URI9 304 aa13.41□□□□□ -0.26
USE1-201ENST00000263897 hCG_38984A0A1B0GV85 526 aa13.41□□□□□ -0.26
USE1-201ENST00000263897 TRIM77I1YAP6 450 aa13.41□□□□□ -0.26
USE1-201ENST00000263897 LGALS8O00214 317 aa13.41□□□□□ -0.26
USE1-201ENST00000263897 TNFRSF13BO14836 293 aaPredicted RBP13.41□□□□□ -0.26
USE1-201ENST00000263897 ATP5HO75947 161 aa13.41□□□□□ -0.26
USE1-201ENST00000263897 ALOX5APP20292 161 aa13.41□□□□□ -0.26
USE1-201ENST00000263897 RPS7P62081 194 aaKnown RBP13.41□□□□□ -0.26
USE1-201ENST00000263897 HOXA4Q00056 320 aaPredicted RBP13.41□□□□□ -0.26
USE1-201ENST00000263897 SNAPC1Q16533 368 aa13.41□□□□□ -0.26
USE1-201ENST00000263897 TUSC1Q2TAM9 212 aa13.41□□□□□ -0.26
USE1-201ENST00000263897 ARMCX4Q5H9R4 360 aa13.41□□□□□ -0.26
USE1-201ENST00000263897 KLF17Q5JT82 389 aaPredicted RBP13.41□□□□□ -0.26
USE1-201ENST00000263897 WDR25Q64LD2 544 aaPredicted RBP13.41□□□□□ -0.26
USE1-201ENST00000263897 SFRP4Q6FHJ7 346 aaPredicted RBP13.41□□□□□ -0.26
USE1-201ENST00000263897 ZNF826PQ6ZT77 177 aa13.41□□□□□ -0.26
USE1-201ENST00000263897 PARP8Q8N3A8 854 aa13.41□□□□□ -0.26
USE1-201ENST00000263897 BOLLQ8N9W6 283 aaKnown RBP13.41□□□□□ -0.26
USE1-201ENST00000263897 FAM216AQ8WUB2 273 aa13.41□□□□□ -0.26
USE1-201ENST00000263897 PGAM5Q96HS1 289 aa13.41□□□□□ -0.26
USE1-201ENST00000263897 TEAD3Q99594 435 aa13.41□□□□□ -0.26
USE1-201ENST00000263897 MMADHCQ9H3L0 296 aaPredicted RBP13.41□□□□□ -0.26
USE1-201ENST00000263897 RGCCQ9H4X1 137 aa13.41□□□□□ -0.26
USE1-201ENST00000263897 CLN8Q9UBY8 286 aa13.41□□□□□ -0.26
USE1-201ENST00000263897 IGHV2-70DA0A0C4DH43 119 aa13.4□□□□□ -0.26
USE1-201ENST00000263897 LHBP01229 141 aa13.4□□□□□ -0.26
USE1-201ENST00000263897 PPIAL4GP0DN37 164 aa13.4□□□□□ -0.26
USE1-201ENST00000263897 NAA10P41227 235 aaPredicted RBP13.4□□□□□ -0.26
USE1-201ENST00000263897 HCCSP53701 268 aa13.4□□□□□ -0.26
USE1-201ENST00000263897 APOFQ13790 326 aa13.4□□□□□ -0.26
USE1-201ENST00000263897 PTGES3Q15185 160 aaKnown RBP13.4□□□□□ -0.26
USE1-201ENST00000263897 KCNJ8Q15842 424 aa13.4□□□□□ -0.26
USE1-201ENST00000263897 BTNL3Q6UXE8 466 aa13.4□□□□□ -0.26
USE1-201ENST00000263897 C11orf53Q8IXP5 236 aa13.4□□□□□ -0.26
USE1-201ENST00000263897 CSNK2A3Q8NEV1 391 aa13.4□□□□□ -0.26
USE1-201ENST00000263897 OR8S1Q8NH09 359 aa13.4□□□□□ -0.26
USE1-201ENST00000263897 YIPF3Q9GZM5 350 aa13.4□□□□□ -0.26
USE1-201ENST00000263897 NIPAL2Q9H841 368 aa13.4□□□□□ -0.26
USE1-201ENST00000263897 KIF17Q9P2E2 1029 aa13.4□□□□□ -0.26
USE1-201ENST00000263897 ZNF69Q9UC07 566 aa13.4□□□□□ -0.26
USE1-201ENST00000263897 KLHDC2Q9Y2U9 406 aa13.4□□□□□ -0.26
USE1-201ENST00000263897 TENM1Q9UKZ4 2725 aa13.4□□□□□ -0.27
USE1-201ENST00000263897 TRAV38-1A0A0B4J264 116 aa13.39□□□□□ -0.27
USE1-201ENST00000263897 A6NLC8 198 aa13.39□□□□□ -0.27
USE1-201ENST00000263897 C3orf80F5H4A9 247 aa13.39□□□□□ -0.27
USE1-201ENST00000263897 PHYHO14832 338 aa13.39□□□□□ -0.27
USE1-201ENST00000263897 NDUFA2O43678 99 aa13.39□□□□□ -0.27
USE1-201ENST00000263897 ESRRGP62508 458 aa13.39□□□□□ -0.27
USE1-201ENST00000263897 OR8B8Q15620 311 aa13.39□□□□□ -0.27
USE1-201ENST00000263897 ATP6AP1Q15904 470 aa13.39□□□□□ -0.27
USE1-201ENST00000263897 GFOD2Q3B7J2 385 aa13.39□□□□□ -0.27
USE1-201ENST00000263897 GCSAMQ8N6F7 178 aa13.39□□□□□ -0.27
USE1-201ENST00000263897 ZDHHC22Q8N966 263 aa13.39□□□□□ -0.27
USE1-201ENST00000263897 NUDT16L1Q9BRJ7 211 aaKnown RBP13.39□□□□□ -0.27
USE1-201ENST00000263897 PPP1R3EQ9H7J1 279 aa13.39□□□□□ -0.27
USE1-201ENST00000263897 RNPEPL1Q9HAU8 725 aa13.39□□□□□ -0.27
USE1-201ENST00000263897 ESM1Q9NQ30 184 aa13.39□□□□□ -0.27
USE1-201ENST00000263897 TRIM36Q9NQ86 728 aa13.39□□□□□ -0.27
USE1-201ENST00000263897 LAMP5Q9UJQ1 280 aa13.39□□□□□ -0.27
USE1-201ENST00000263897 RHBDD3Q9Y3P4 386 aa13.39□□□□□ -0.27
USE1-201ENST00000263897 AP4S1Q9Y587 144 aa13.39□□□□□ -0.27
USE1-201ENST00000263897 OOEPA6NGQ2 149 aa13.38□□□□□ -0.27
USE1-201ENST00000263897 G3V2T6 193 aa13.38□□□□□ -0.27
USE1-201ENST00000263897 GNALP38405 381 aa13.38□□□□□ -0.27
USE1-201ENST00000263897 NPY4RP50391 375 aa13.38□□□□□ -0.27
USE1-201ENST00000263897 EFNB1P98172 346 aa13.38□□□□□ -0.27
USE1-201ENST00000263897 SNCBQ16143 134 aa13.38□□□□□ -0.27
USE1-201ENST00000263897 DEGS2Q6QHC5 323 aa13.38□□□□□ -0.27
USE1-201ENST00000263897 RBMS3Q6XE24 437 aaKnown RBP13.38□□□□□ -0.27
USE1-201ENST00000263897 KRT77Q7Z794 578 aa13.38□□□□□ -0.27
USE1-201ENST00000263897 WDR86Q86TI4 376 aa13.38□□□□□ -0.27
USE1-201ENST00000263897 BCL6BQ8N143 479 aaPredicted RBP13.38□□□□□ -0.27
USE1-201ENST00000263897 SIGLECL1Q8N7X8 197 aa13.38□□□□□ -0.27
USE1-201ENST00000263897 OR1M1Q8NGA1 313 aa13.38□□□□□ -0.27
USE1-201ENST00000263897 UPRTQ96BW1 309 aa13.38□□□□□ -0.27
USE1-201ENST00000263897 DUS3LQ96G46 650 aaKnown RBP13.38□□□□□ -0.27
USE1-201ENST00000263897 ERVK-18Q9QC07 812 aa13.38□□□□□ -0.27
USE1-201ENST00000263897 CTSZQ9UBR2 303 aa13.38□□□□□ -0.27
USE1-201ENST00000263897 hCG_1807616A0A1W2PRN6 198 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms