RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 SNTB2Q13425 540 aaKnown RBP8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 CNPY1Q3B7I2 92 aa8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 HSD17B12Q53GQ0 312 aa8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 OR2T2Q6IF00 324 aa8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 VHLLQ6RSH7 139 aa8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 GDPGP1Q6ZNW5 385 aa8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 MRPL21Q7Z2W9 205 aaKnown RBP8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 RNF144BQ7Z419 303 aa8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 BHLHE23Q8NDY6 225 aa8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 NEUROG1Q92886 237 aa8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 SPSB4Q96A44 273 aa8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 PLPPR2Q96GM1 343 aa8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 KCTD7Q96MP8 289 aa8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 USB1Q9BQ65 265 aaKnown RBP8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 SLC30A2Q9BRI3 323 aa8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 REPIN1Q9BWE0 567 aaKnown RBP8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 DCSTAMPQ9H295 470 aa8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 GSTK1Q9Y2Q3 226 aa8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 V9GYS6 101 aa8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 LRRK2Q5S007 2527 aa8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 WIPF3A6NGB9 483 aa8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 GATBO75879 557 aaKnown RBP8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 DHRS3O75911 302 aa8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 PLAUP00749 431 aa8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 PLA2G2AP14555 144 aa8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 ZNF20P17024 532 aa8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 ZNF182P17025 639 aaPredicted RBP8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 ADRA2CP18825 462 aa8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 SRMP19623 302 aa8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 PTAFRP25105 342 aa8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 RAD52P43351 418 aa8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 OR10A3P58181 314 aa8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 C3orf36Q3SXR2 165 aa8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 NCMAPQ5T1S8 102 aa8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 ADAM5Q6NVV9 412 aa8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 TMEM108Q6UXF1 575 aa8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 PGAP1Q75T13 922 aa8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 LRP11Q86VZ4 500 aa8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 NR2C2APQ86WQ0 139 aa8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 OR5AS1Q8N127 324 aa8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 DNAAF1Q8NEP3 725 aa8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 OR56B2PQ8NGI1 322 aa8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 OR51A2Q8NGJ7 313 aa8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 OR5L1Q8NGL2 311 aa8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 AKAP1Q92667 903 aaKnown RBP eCLIP8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 MARS2Q96GW9 593 aaKnown RBP8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 GFI1Q99684 422 aa8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 SNTG1Q9NSN8 517 aa8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 AK6Q9Y3D8 172 aaKnown RBP8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 PKDREJQ9NTG1 2253 aa8.36□□□□□ -1.07
SNRNP40-201ENST00000263694 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 GGT3PA6NGU5 568 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 ZNF701M0R085 212 aaPredicted RBP8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 SLC22A1O15245 554 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 ICMTO60725 284 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 CD2P06729 351 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 GALP22466 123 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 THBS4P35443 961 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 MAP2K3P46734 347 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 NKX6-1P78426 367 aaPredicted RBP8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 PSG7Q13046 419 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 OR8B8Q15620 311 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 SLC22A25Q6T423 547 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 PAMR1Q6UXH9 720 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 Q6ZSR3 168 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 USP43Q70EL4 1123 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 LRRTM1Q86UE6 522 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 SEMA6DQ8NFY4 1073 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 KBTBD8Q8NFY9 601 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 OR13C9Q8NGT0 318 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 KLF14Q8TD94 323 aaPredicted RBP8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 NPRL2Q8WTW4 380 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 PIGCQ92535 297 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 DVL3Q92997 716 aaPredicted RBP8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 SPACA5Q96QH8 159 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 BARHL1Q9BZE3 327 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 RGCCQ9H4X1 137 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 PLEKHA1Q9HB21 404 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 MOV10Q9HCE1 1003 aaKnown RBP8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 GPR173Q9NS66 373 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 RHBDD3Q9Y3P4 386 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 IGKV1-9A0A0C4DH69 117 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 LOC390937A0A1W2PQ73 354 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 TRIM64BA6NI03 449 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 CD300LBA8K4G0 201 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 DEFB108AA8MXU0 73 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 CASKO14936 926 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 MTRF1O75570 445 aaKnown RBP8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 ARL6IP5O75915 188 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 IGFBP3P17936 291 aaPredicted RBP8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 PAX7P23759 505 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 MYL9P24844 172 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 MAPK3P27361 379 aaPredicted RBP8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 KIR2DL3P43628 341 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 PRR20EP86478 221 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 PRR20CP86479 221 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 PRR20DP86480 221 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 PRR20BP86481 221 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 PRR20AP86496 221 aa8.35□□□□□ -1.07
SNRNP40-201ENST00000263694 RIPPLY1Q0D2K3 151 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms