RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 LIMK1P53667 647 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 RAE1P78406 368 aaKnown RBP10.89□□□□□ -0.67
SMG6-201ENST00000263073 B4GALNT1Q00973 533 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 EGR3Q06889 387 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 ENDOGQ14249 297 aaKnown RBP10.89□□□□□ -0.67
SMG6-201ENST00000263073 DRAM2Q6UX65 266 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 SLC25A26Q70HW3 274 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 CXorf67Q86X51 503 aaPredicted RBP10.89□□□□□ -0.67
SMG6-201ENST00000263073 CBLN2Q8IUK8 224 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 KDF1Q8NAX2 398 aaPredicted RBP10.89□□□□□ -0.67
SMG6-201ENST00000263073 THAP10Q9P2Z0 257 aaPredicted RBP10.89□□□□□ -0.67
SMG6-201ENST00000263073 TRAPPC1Q9Y5R8 145 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 LEUTXA8MZ59 168 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 ARPC3O15145 178 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 GPR12P47775 334 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 MNX1P50219 401 aaPredicted RBP10.89□□□□□ -0.67
SMG6-201ENST00000263073 RAB13P51153 203 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 YPEL5P62699 121 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 PLPP6Q8IY26 295 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 TP53I13Q8NBR0 393 aaPredicted RBP10.89□□□□□ -0.67
SMG6-201ENST00000263073 A0A1B0GX78 115 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 TLCD2A6NGC4 264 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 ZNF17P17021 662 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 HNRNPA3P51991 378 aaKnown RBP10.88□□□□□ -0.67
SMG6-201ENST00000263073 PPP1R1AQ13522 171 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 GSG1Q2KHT4 349 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 TRMT61AQ96FX7 289 aaKnown RBP10.88□□□□□ -0.67
SMG6-201ENST00000263073 TMPRSS5Q9H3S3 457 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 ZNF835Q9Y2P0 537 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 APOBEC1P41238 236 aaKnown RBP10.88□□□□□ -0.67
SMG6-201ENST00000263073 LYPD8Q6UX82 237 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 OR52N5Q8NH56 324 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 APH1AQ96BI3 265 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 THOC3Q96J01 351 aaKnown RBP10.88□□□□□ -0.67
SMG6-201ENST00000263073 N4BP2Q86UW6 1770 aaPredicted RBP10.88□□□□□ -0.67
SMG6-201ENST00000263073 NUDT19A8MXV4 375 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 ABCD4O14678 606 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 TERTO14746 1132 aaKnown RBP10.88□□□□□ -0.67
SMG6-201ENST00000263073 GPR37O15354 613 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 PCMT1P22061 227 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 F2RP25116 425 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 RPS4XP62701 263 aaKnown RBP10.88□□□□□ -0.67
SMG6-201ENST00000263073 MSRB3Q8IXL7 192 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 SLC38A6Q8IZM9 456 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 OR10G3Q8NGC4 313 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 BCL7CQ8WUZ0 217 aaPredicted RBP10.88□□□□□ -0.67
SMG6-201ENST00000263073 ROBO4Q8WZ75 1007 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 NRTNQ99748 197 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 ZBP1Q9H171 429 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 CYSLTR2Q9NS75 346 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 LRP12Q9Y561 859 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 CRYM-AS1A6NIL9 109 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 GPM6AP51674 278 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 ERVFC1-1P60608 527 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 RAB1AP62820 205 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 FAM26DQ5JW98 314 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 GVQW1Q8N7I0 195 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 AGBL5Q8NDL9 886 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 C17orf47Q8NEP4 570 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 ZG16BQ96DA0 208 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 BARX1Q9HBU1 254 aaPredicted RBP10.88□□□□□ -0.67
SMG6-201ENST00000263073 OR5V1Q9UGF6 321 aa10.88□□□□□ -0.67
SMG6-201ENST00000263073 KIR2DS1A0A191URI9 304 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 KCNAB3O43448 404 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 IGF2P01344 180 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 CXCL3P19876 107 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 DTYMKP23919 212 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 KIR2DS4P43632 304 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 RPL29P47914 159 aaKnown RBP10.87□□□□□ -0.67
SMG6-201ENST00000263073 PPP2CBP62714 309 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 PPP2CAP67775 309 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 FMODQ06828 376 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 KIR2DS1Q14954 304 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 ACSM6Q6P461 480 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 SYS1Q8N2H4 156 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 IL22RA2Q969J5 263 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 FBXO17Q96EF6 278 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 CCDC74BQ96LY2 380 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 NUDT9Q9BW91 350 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 SIRT3Q9NTG7 399 aaPredicted RBP10.87□□□□□ -0.67
SMG6-201ENST00000263073 TIAL1Q01085 375 aaKnown RBP eCLIP10.87□□□□□ -0.67
SMG6-201ENST00000263073 GGNBP1Q5YKI7 109 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 C12orf73Q69YU5 71 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 WDR88Q6ZMY6 472 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 OR10V1Q8NGI7 309 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 GPX8Q8TED1 209 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 VAMP8Q9BV40 100 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 A0A1B0GUL6 1792 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 MBTPS2O43462 519 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 ABLIM3O94929 683 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 EIF1P41567 113 aaKnown RBP10.87□□□□□ -0.67
SMG6-201ENST00000263073 ERVS71-1P61550 626 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 RAB35Q15286 201 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 RGP1Q92546 391 aaPredicted RBP10.87□□□□□ -0.67
SMG6-201ENST00000263073 SCMH1Q96GD3 660 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 SLC35E1Q96K37 410 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 STRCP1A6NGW2 1772 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 CD22P20273 847 aa10.87□□□□□ -0.67
SMG6-201ENST00000263073 ACOT6Q3I5F7 207 aaPredicted RBP10.87□□□□□ -0.67
SMG6-201ENST00000263073 MOGAT2Q3SYC2 334 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms