RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 OPRM1P35372 400 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 PLA2G5P39877 138 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 RFC3P40938 356 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 RRADP55042 308 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 BIDP55957 195 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 HNF4GQ14541 408 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 CCDC157Q569K6 752 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 FAM180AQ6UWF9 173 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 DHRS11Q6UWP2 260 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 EIF4E3Q8N5X7 224 aaKnown RBP11.53□□□□□ -0.56
SNX1-201ENST00000261889 GPX7Q96SL4 187 aaPredicted RBP11.53□□□□□ -0.56
SNX1-201ENST00000261889 NRIP2Q9BQI9 281 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 SULT4A1Q9BR01 284 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 DUX4Q9UBX2 424 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 FBXO7Q9Y3I1 522 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 NPIPA5E9PKD4 350 aa11.52□□□□□ -0.56
SNX1-201ENST00000261889 C3orf80F5H4A9 247 aa11.52□□□□□ -0.56
SNX1-201ENST00000261889 PRAMEF26H0Y7S4 382 aa11.52□□□□□ -0.56
SNX1-201ENST00000261889 ZNF93P35789 620 aaPredicted RBP11.52□□□□□ -0.56
SNX1-201ENST00000261889 FXYD4P59646 89 aa11.52□□□□□ -0.56
SNX1-201ENST00000261889 MPPED2Q15777 294 aa11.52□□□□□ -0.56
SNX1-201ENST00000261889 C9orf152Q5JTZ5 239 aa11.52□□□□□ -0.56
SNX1-201ENST00000261889 Q6ZRG5 221 aa11.52□□□□□ -0.56
SNX1-201ENST00000261889 MAMDC2Q7Z304 686 aaPredicted RBP11.52□□□□□ -0.56
SNX1-201ENST00000261889 MYPOPQ86VE0 399 aaPredicted RBP11.52□□□□□ -0.56
SNX1-201ENST00000261889 FAM24BQ8N5W8 94 aa11.52□□□□□ -0.56
SNX1-201ENST00000261889 NPIPA1Q9UND3 350 aa11.52□□□□□ -0.56
SNX1-201ENST00000261889 A0A1W2PPE2 198 aa11.52□□□□□ -0.57
SNX1-201ENST00000261889 TTRP02766 147 aa11.52□□□□□ -0.57
SNX1-201ENST00000261889 AMY2BP19961 511 aa11.52□□□□□ -0.57
SNX1-201ENST00000261889 GABRR1P24046 479 aa11.52□□□□□ -0.57
SNX1-201ENST00000261889 HABP2Q14520 560 aaPredicted RBP11.52□□□□□ -0.57
SNX1-201ENST00000261889 C17orf78Q8N4C9 275 aa11.52□□□□□ -0.57
SNX1-201ENST00000261889 HSD17B11Q8NBQ5 300 aa11.52□□□□□ -0.57
SNX1-201ENST00000261889 LMX1AQ8TE12 382 aa11.52□□□□□ -0.57
SNX1-201ENST00000261889 PIGTQ969N2 578 aa11.52□□□□□ -0.57
SNX1-201ENST00000261889 PRRT1Q99946 306 aa11.52□□□□□ -0.57
SNX1-201ENST00000261889 RAB33BQ9H082 229 aa11.52□□□□□ -0.57
SNX1-201ENST00000261889 EHFQ9NZC4 300 aa11.52□□□□□ -0.57
SNX1-201ENST00000261889 ASH2LQ9UBL3 628 aa11.52□□□□□ -0.57
SNX1-201ENST00000261889 GHRLQ9UBU3 117 aa11.52□□□□□ -0.57
SNX1-201ENST00000261889 NDRG3Q9UGV2 375 aa11.52□□□□□ -0.57
SNX1-201ENST00000261889 NUP210LQ5VU65 1888 aa11.52□□□□□ -0.57
SNX1-201ENST00000261889 TMEM150CB9EJG8 249 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 ZNF878C9JN71 531 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 TNFP01375 233 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 SNU13P55769 128 aaKnown RBP11.51□□□□□ -0.57
SNX1-201ENST00000261889 FABP9Q0Z7S8 132 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 FUT7Q11130 342 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 SMCO1Q147U7 214 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 MISPQ8IVT2 679 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 CCDC36Q8IYA8 594 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 AKR7LQ8NHP1 331 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 C11orf40Q8WZ69 217 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 SGK3Q96BR1 496 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 BIN3Q9NQY0 253 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 ZFP57Q9NU63 452 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 WNT16Q9UBV4 365 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 PRSS44E7EML9 344 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 G3V3Y1 287 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 FAM157CP0CG43 387 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 ABCD3P28288 659 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 SLC6A9P48067 706 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 CSNK2A1P68400 391 aaPredicted RBP11.51□□□□□ -0.57
SNX1-201ENST00000261889 CTAG1AP78358 180 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 FNDC7Q5VTL7 733 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 FAM57BQ71RH2 274 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 CSNK2A3Q8NEV1 391 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 C15orf40Q8WUR7 153 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 RNF141Q8WVD5 230 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 SLC39A7Q92504 469 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 SH3BGRL3Q9H299 93 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 B3GALT1Q9Y5Z6 326 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 RNASEK-C17orf49H0YIS7 233 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 ANGPTL7O43827 346 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 AHSA1O95433 338 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 CD74P04233 296 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 SUPT4H1P63272 117 aaKnown RBP11.51□□□□□ -0.57
SNX1-201ENST00000261889 SUMF1Q8NBK3 374 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 ERGIC1Q969X5 290 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 SLAMF6Q96DU3 332 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 EIF5A2Q9GZV4 153 aaKnown RBP11.51□□□□□ -0.57
SNX1-201ENST00000261889 POLE3Q9NRF9 147 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 R4GMQ9 66 aa11.51□□□□□ -0.57
SNX1-201ENST00000261889 RP1L1Q8IWN7 2480 aaPredicted RBP11.51□□□□□ -0.57
SNX1-201ENST00000261889 TRAV36DV7A0A075B6V5 113 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 F5H5K5 113 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 MASP2O00187 686 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 SEMA4FO95754 770 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 CD1AP06126 327 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 OMGP23515 440 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 CTHP32929 405 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 OR3A2P47893 321 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 TMEM50BP56557 158 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 TLE3Q04726 772 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 FAM76BQ5HYJ3 339 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 CPEB2Q7Z5Q1 589 aaKnown RBP11.5□□□□□ -0.57
SNX1-201ENST00000261889 LRRC18Q8N456 261 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 AQP3Q92482 292 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 RAB3CQ96E17 227 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms