RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 PPIAL4EA0A075B759 164 aa19.23■□□□□ 0.67
LSM4-201ENST00000252816 ANKRD30BLA7E2S9 258 aa19.23■□□□□ 0.67
LSM4-201ENST00000252816 PPIAL4DF5H284 164 aa19.23■□□□□ 0.67
LSM4-201ENST00000252816 FOXH1O75593 365 aa19.23■□□□□ 0.67
LSM4-201ENST00000252816 WNT2P09544 360 aa19.23■□□□□ 0.67
LSM4-201ENST00000252816 PPIAL4FP0DN26 164 aa19.23■□□□□ 0.67
LSM4-201ENST00000252816 CFL1P23528 166 aaKnown RBP19.23■□□□□ 0.67
LSM4-201ENST00000252816 SRSF2Q01130 221 aaKnown RBP19.23■□□□□ 0.67
LSM4-201ENST00000252816 DCAF12L2Q5VW00 463 aa19.23■□□□□ 0.67
LSM4-201ENST00000252816 KLBQ86Z14 1044 aa19.23■□□□□ 0.67
LSM4-201ENST00000252816 SPERTQ8NA61 448 aa19.23■□□□□ 0.67
LSM4-201ENST00000252816 C19orf18Q8NEA5 215 aa19.23■□□□□ 0.67
LSM4-201ENST00000252816 OR8B12Q8NGG6 310 aa19.23■□□□□ 0.67
LSM4-201ENST00000252816 OR11L1Q8NGX0 322 aa19.23■□□□□ 0.67
LSM4-201ENST00000252816 LYZL4Q96KX0 146 aa19.23■□□□□ 0.67
LSM4-201ENST00000252816 RBM4BQ9BQ04 359 aaKnown RBP19.23■□□□□ 0.67
LSM4-201ENST00000252816 TTTY10Q9BZA0 68 aa19.23■□□□□ 0.67
LSM4-201ENST00000252816 RGCCQ9H4X1 137 aa19.23■□□□□ 0.67
LSM4-201ENST00000252816 NIPAL2Q9H841 368 aa19.23■□□□□ 0.67
LSM4-201ENST00000252816 FN3KRPQ9HA64 309 aa19.23■□□□□ 0.67
LSM4-201ENST00000252816 ADGRL4Q9HBW9 690 aa19.23■□□□□ 0.67
LSM4-201ENST00000252816 MMP26Q9NRE1 261 aa19.23■□□□□ 0.67
LSM4-201ENST00000252816 PPIAL4AQ9Y536 164 aa19.23■□□□□ 0.67
LSM4-201ENST00000252816 LOC105371242A0A075B767 164 aa19.22■□□□□ 0.67
LSM4-201ENST00000252816 SLC22A31A6NKX4 558 aa19.22■□□□□ 0.67
LSM4-201ENST00000252816 FSTL3O95633 263 aa19.22■□□□□ 0.67
LSM4-201ENST00000252816 IRF2P14316 349 aa19.22■□□□□ 0.67
LSM4-201ENST00000252816 ACKR3P25106 362 aa19.22■□□□□ 0.67
LSM4-201ENST00000252816 ROM1Q03395 351 aa19.22■□□□□ 0.67
LSM4-201ENST00000252816 OR8B8Q15620 311 aa19.22■□□□□ 0.67
LSM4-201ENST00000252816 ZNF404Q494X3 552 aa19.22■□□□□ 0.67
LSM4-201ENST00000252816 ZFP1Q6P2D0 407 aa19.22■□□□□ 0.67
LSM4-201ENST00000252816 KCTD18Q6PI47 426 aaPredicted RBP19.22■□□□□ 0.67
LSM4-201ENST00000252816 DEGS2Q6QHC5 323 aa19.22■□□□□ 0.67
LSM4-201ENST00000252816 PLPP7Q8NBV4 271 aa19.22■□□□□ 0.67
LSM4-201ENST00000252816 OR8B4Q96RC9 309 aa19.22■□□□□ 0.67
LSM4-201ENST00000252816 METTL17Q9H7H0 456 aaPredicted RBP19.22■□□□□ 0.67
LSM4-201ENST00000252816 H2AFY2Q9P0M6 372 aaPredicted RBP19.22■□□□□ 0.67
LSM4-201ENST00000252816 RHBDD3Q9Y3P4 386 aa19.22■□□□□ 0.67
LSM4-201ENST00000252816 A8MXK9 166 aa19.21■□□□□ 0.67
LSM4-201ENST00000252816 TRAPPC2LH3BP13 241 aa19.21■□□□□ 0.67
LSM4-201ENST00000252816 J3QLI3 93 aa19.21■□□□□ 0.67
LSM4-201ENST00000252816 GRPP07492 148 aa19.21■□□□□ 0.67
LSM4-201ENST00000252816 ZNF826PQ6ZT77 177 aa19.21■□□□□ 0.67
LSM4-201ENST00000252816 WDR86Q86TI4 376 aa19.21■□□□□ 0.67
LSM4-201ENST00000252816 FAM206AQ9NX38 181 aa19.21■□□□□ 0.67
LSM4-201ENST00000252816 RNF7Q9UBF6 113 aa19.21■□□□□ 0.67
LSM4-201ENST00000252816 OPN4Q9UHM6 478 aa19.21■□□□□ 0.67
LSM4-201ENST00000252816 POLR3KQ9Y2Y1 108 aaPredicted RBP19.21■□□□□ 0.67
LSM4-201ENST00000252816 TMEM14AQ9Y6G1 99 aa19.21■□□□□ 0.67
LSM4-201ENST00000252816 PPIAL4CA0A0B4J2A2 164 aa19.2■□□□□ 0.66
LSM4-201ENST00000252816 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.2■□□□□ 0.66
LSM4-201ENST00000252816 RNF212BA8MTL3 300 aa19.2■□□□□ 0.66
LSM4-201ENST00000252816 ALPLP05186 524 aa19.2■□□□□ 0.66
LSM4-201ENST00000252816 RPS2P15880 293 aaKnown RBP19.2■□□□□ 0.66
LSM4-201ENST00000252816 ADRA2CP18825 462 aa19.2■□□□□ 0.66
LSM4-201ENST00000252816 GID4Q8IVV7 300 aa19.2■□□□□ 0.66
LSM4-201ENST00000252816 SLC35F2Q8IXU6 374 aa19.2■□□□□ 0.66
LSM4-201ENST00000252816 ZNF679Q8IYX0 411 aa19.2■□□□□ 0.66
LSM4-201ENST00000252816 DEFB108BQ8NET1 73 aa19.2■□□□□ 0.66
LSM4-201ENST00000252816 CSNK2A3Q8NEV1 391 aa19.2■□□□□ 0.66
LSM4-201ENST00000252816 OR8S1Q8NH09 359 aa19.2■□□□□ 0.66
LSM4-201ENST00000252816 ASB17Q8WXJ9 295 aa19.2■□□□□ 0.66
LSM4-201ENST00000252816 PAPOLGQ9BWT3 736 aaKnown RBP19.2■□□□□ 0.66
LSM4-201ENST00000252816 MROQ9BYG7 248 aa19.2■□□□□ 0.66
LSM4-201ENST00000252816 C7orf69Q9H7B7 122 aa19.2■□□□□ 0.66
LSM4-201ENST00000252816 C1orf123Q9NWV4 160 aa19.2■□□□□ 0.66
LSM4-201ENST00000252816 HAO2Q9NYQ3 351 aa19.2■□□□□ 0.66
LSM4-201ENST00000252816 TMEM269A0A1B0GVZ9 245 aa19.19■□□□□ 0.66
LSM4-201ENST00000252816 EI24O14681 340 aa19.19■□□□□ 0.66
LSM4-201ENST00000252816 MAGEB4O15481 346 aaPredicted RBP19.19■□□□□ 0.66
LSM4-201ENST00000252816 GATA3P23771 443 aa19.19■□□□□ 0.66
LSM4-201ENST00000252816 ESCO2Q56NI9 601 aa19.19■□□□□ 0.66
LSM4-201ENST00000252816 C11orf53Q8IXP5 236 aa19.19■□□□□ 0.66
LSM4-201ENST00000252816 BOLLQ8N9W6 283 aaKnown RBP19.19■□□□□ 0.66
LSM4-201ENST00000252816 C14orf119Q9NWQ9 140 aa19.19■□□□□ 0.66
LSM4-201ENST00000252816 MIOXQ9UGB7 285 aa19.19■□□□□ 0.66
LSM4-201ENST00000252816 METRNQ9UJH8 293 aa19.19■□□□□ 0.66
LSM4-201ENST00000252816 IKZF2Q9UKS7 526 aa19.19■□□□□ 0.66
LSM4-201ENST00000252816 LRCH1Q9Y2L9 728 aa19.19■□□□□ 0.66
LSM4-201ENST00000252816 A6NLC8 198 aa19.18■□□□□ 0.66
LSM4-201ENST00000252816 ZNF254O75437 659 aa19.18■□□□□ 0.66
LSM4-201ENST00000252816 DCTDP32321 178 aa19.18■□□□□ 0.66
LSM4-201ENST00000252816 CXCR4P61073 352 aa19.18■□□□□ 0.66
LSM4-201ENST00000252816 MFGE8Q08431 387 aaPredicted RBP19.18■□□□□ 0.66
LSM4-201ENST00000252816 MZT1Q08AG7 82 aa19.18■□□□□ 0.66
LSM4-201ENST00000252816 SFRP4Q6FHJ7 346 aaPredicted RBP19.18■□□□□ 0.66
LSM4-201ENST00000252816 ZNF322Q6U7Q0 402 aaPredicted RBP19.18■□□□□ 0.66
LSM4-201ENST00000252816 LYPD2Q6UXB3 125 aa19.18■□□□□ 0.66
LSM4-201ENST00000252816 OR51G2Q8NGK0 314 aa19.18■□□□□ 0.66
LSM4-201ENST00000252816 PPP1R14AQ96A00 147 aa19.18■□□□□ 0.66
LSM4-201ENST00000252816 APOL4Q9BPW4 351 aa19.18■□□□□ 0.66
LSM4-201ENST00000252816 SSBP3Q9BWW4 388 aaPredicted RBP19.18■□□□□ 0.66
LSM4-201ENST00000252816 CLN6Q9NWW5 311 aa19.18■□□□□ 0.66
LSM4-201ENST00000252816 USE1Q9NZ43 259 aa19.18■□□□□ 0.66
LSM4-201ENST00000252816 ACOD1A6NK06 481 aa19.17■□□□□ 0.66
LSM4-201ENST00000252816 C3orf80F5H4A9 247 aa19.17■□□□□ 0.66
LSM4-201ENST00000252816 CPT2P23786 658 aa19.17■□□□□ 0.66
LSM4-201ENST00000252816 HTR1FP30939 366 aa19.17■□□□□ 0.66
LSM4-201ENST00000252816 CD80P33681 288 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms