RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 OR6C6A6NF89 314 aa20.05■□□□□ 0.8
HOXD9-201ENST00000249499 E9PLN8 166 aa20.05■□□□□ 0.8
HOXD9-201ENST00000249499 SSNA1O43805 119 aa20.05■□□□□ 0.8
HOXD9-201ENST00000249499 SYNGR4O95473 234 aa20.05■□□□□ 0.8
HOXD9-201ENST00000249499 CD74P04233 296 aa20.05■□□□□ 0.8
HOXD9-201ENST00000249499 HCKP08631 526 aa20.05■□□□□ 0.8
HOXD9-201ENST00000249499 ANOS1P23352 680 aa20.05■□□□□ 0.8
HOXD9-201ENST00000249499 PLGLB1Q02325 96 aa20.05■□□□□ 0.8
HOXD9-201ENST00000249499 MOGAT2Q3SYC2 334 aa20.05■□□□□ 0.8
HOXD9-201ENST00000249499 FAAP20Q6NZ36 180 aa20.05■□□□□ 0.8
HOXD9-201ENST00000249499 SEZ6L2Q6UXD5 910 aa20.05■□□□□ 0.8
HOXD9-201ENST00000249499 ASCC1Q8N9N2 400 aaKnown RBP20.05■□□□□ 0.8
HOXD9-201ENST00000249499 PNLDC1Q8NA58 520 aaKnown RBP20.05■□□□□ 0.8
HOXD9-201ENST00000249499 ITFG2Q969R8 447 aa20.05■□□□□ 0.8
HOXD9-201ENST00000249499 ALKBH3Q96Q83 286 aaPredicted RBP20.05■□□□□ 0.8
HOXD9-201ENST00000249499 CHST5Q9GZS9 411 aa20.05■□□□□ 0.8
HOXD9-201ENST00000249499 NPDC1Q9NQX5 325 aaPredicted RBP20.05■□□□□ 0.8
HOXD9-201ENST00000249499 MCTS1Q9ULC4 181 aaKnown RBP20.05■□□□□ 0.8
HOXD9-201ENST00000249499 CYB5AP00167 134 aa20.04■□□□□ 0.8
HOXD9-201ENST00000249499 CD3DP04234 171 aa20.04■□□□□ 0.8
HOXD9-201ENST00000249499 CD46P15529 392 aa20.04■□□□□ 0.8
HOXD9-201ENST00000249499 MAGEA5P43359 124 aa20.04■□□□□ 0.8
HOXD9-201ENST00000249499 CEACAM16Q2WEN9 425 aa20.04■□□□□ 0.8
HOXD9-201ENST00000249499 GFOD2Q3B7J2 385 aa20.04■□□□□ 0.8
HOXD9-201ENST00000249499 GLIPR1L1Q6UWM5 242 aa20.04■□□□□ 0.8
HOXD9-201ENST00000249499 NAA40Q86UY6 237 aa20.04■□□□□ 0.8
HOXD9-201ENST00000249499 ACBD4Q8NC06 268 aa20.04■□□□□ 0.8
HOXD9-201ENST00000249499 GON7Q9BXV9 100 aa20.04■□□□□ 0.8
HOXD9-201ENST00000249499 ACKR4Q9NPB9 350 aa20.04■□□□□ 0.8
HOXD9-201ENST00000249499 UPB1Q9UBR1 384 aa20.04■□□□□ 0.8
HOXD9-201ENST00000249499 ZNF222Q9UK12 451 aa20.04■□□□□ 0.8
HOXD9-201ENST00000249499 NOSIPQ9Y314 301 aaKnown RBP20.04■□□□□ 0.8
HOXD9-201ENST00000249499 HPXP02790 462 aa20.03■□□□□ 0.8
HOXD9-201ENST00000249499 FTH1P19P0C7X4 201 aa20.03■□□□□ 0.8
HOXD9-201ENST00000249499 Q6ZTK2 550 aa20.03■□□□□ 0.8
HOXD9-201ENST00000249499 SPICQ8N5J4 248 aa20.03■□□□□ 0.8
HOXD9-201ENST00000249499 ZFP62Q8NB50 900 aaPredicted RBP20.03■□□□□ 0.8
HOXD9-201ENST00000249499 C1orf147Q96MC9 270 aaPredicted RBP20.03■□□□□ 0.8
HOXD9-201ENST00000249499 TMEM246Q9BRR3 403 aa20.03■□□□□ 0.8
HOXD9-201ENST00000249499 GINS4Q9BRT9 223 aa20.03■□□□□ 0.8
HOXD9-201ENST00000249499 ATPIF1Q9UII2 106 aa20.03■□□□□ 0.8
HOXD9-201ENST00000249499 CNOT1A5YKK6 2376 aaKnown RBP20.03■□□□□ 0.8
HOXD9-201ENST00000249499 IGKV1-9A0A0C4DH69 117 aa20.03■□□□□ 0.8
HOXD9-201ENST00000249499 ZNF724A8MTY0 619 aa20.03■□□□□ 0.8
HOXD9-201ENST00000249499 FABP7O15540 132 aa20.03■□□□□ 0.8
HOXD9-201ENST00000249499 CREBL2O60519 120 aaPredicted RBP20.03■□□□□ 0.8
HOXD9-201ENST00000249499 MRPL33O75394 65 aaKnown RBP20.03■□□□□ 0.8
HOXD9-201ENST00000249499 FARS2O95363 451 aaKnown RBP20.03■□□□□ 0.8
HOXD9-201ENST00000249499 ACTL6AO96019 429 aa20.03■□□□□ 0.8
HOXD9-201ENST00000249499 MEOX1P50221 254 aa20.03■□□□□ 0.8
HOXD9-201ENST00000249499 ZNF626Q68DY1 528 aa20.03■□□□□ 0.8
HOXD9-201ENST00000249499 ZNF101Q8IZC7 436 aa20.03■□□□□ 0.8
HOXD9-201ENST00000249499 BEST4Q8NFU0 473 aa20.03■□□□□ 0.8
HOXD9-201ENST00000249499 OR10R2Q8NGX6 335 aa20.03■□□□□ 0.8
HOXD9-201ENST00000249499 SLC25A21Q9BQT8 299 aaPredicted RBP20.03■□□□□ 0.8
HOXD9-201ENST00000249499 ZNF224Q9NZL3 707 aa20.03■□□□□ 0.8
HOXD9-201ENST00000249499 MYEF2Q9P2K5 600 aaKnown RBP20.03■□□□□ 0.8
HOXD9-201ENST00000249499 NCOA6Q14686 2063 aaPredicted RBP20.02■□□□□ 0.8
HOXD9-201ENST00000249499 RPL36A-HNRNPH2H7BZ11 118 aa20.02■□□□□ 0.8
HOXD9-201ENST00000249499 RAB3DO95716 219 aa20.02■□□□□ 0.8
HOXD9-201ENST00000249499 CELA3AP09093 270 aa20.02■□□□□ 0.8
HOXD9-201ENST00000249499 B4GALT1P15291 398 aa20.02■□□□□ 0.8
HOXD9-201ENST00000249499 ZNF32P17041 273 aa20.02■□□□□ 0.8
HOXD9-201ENST00000249499 MEF2DQ14814 521 aa20.02■□□□□ 0.8
HOXD9-201ENST00000249499 ZMYND11Q15326 602 aa20.02■□□□□ 0.8
HOXD9-201ENST00000249499 GALNTL5Q7Z4T8 443 aa20.02■□□□□ 0.8
HOXD9-201ENST00000249499 ZNF584Q8IVC4 421 aa20.02■□□□□ 0.8
HOXD9-201ENST00000249499 DEFB124Q8NES8 71 aa20.02■□□□□ 0.8
HOXD9-201ENST00000249499 ALX4Q9H161 411 aaPredicted RBP20.02■□□□□ 0.8
HOXD9-201ENST00000249499 RGCCQ9H4X1 137 aa20.02■□□□□ 0.8
HOXD9-201ENST00000249499 EXO5Q9H790 373 aa20.02■□□□□ 0.8
HOXD9-201ENST00000249499 BCO1Q9HAY6 547 aa20.02■□□□□ 0.8
HOXD9-201ENST00000249499 TMEM235A6NFC5 223 aa20.01■□□□□ 0.79
HOXD9-201ENST00000249499 FAM166BA8MTA8 275 aa20.01■□□□□ 0.79
HOXD9-201ENST00000249499 ZNF736B4DX44 427 aaPredicted RBP20.01■□□□□ 0.79
HOXD9-201ENST00000249499 DBHP09172 617 aa20.01■□□□□ 0.79
HOXD9-201ENST00000249499 GSTP1P09211 210 aaKnown RBP20.01■□□□□ 0.79
HOXD9-201ENST00000249499 CXCL3P19876 107 aa20.01■□□□□ 0.79
HOXD9-201ENST00000249499 RAD52P43351 418 aa20.01■□□□□ 0.79
HOXD9-201ENST00000249499 CDNFQ49AH0 187 aa20.01■□□□□ 0.79
HOXD9-201ENST00000249499 SLC16A14Q7RTX9 510 aa20.01■□□□□ 0.79
HOXD9-201ENST00000249499 OR4D10Q8NGI6 311 aa20.01■□□□□ 0.79
HOXD9-201ENST00000249499 OR51S1Q8NGJ8 323 aa20.01■□□□□ 0.79
HOXD9-201ENST00000249499 HAS2Q92819 552 aa20.01■□□□□ 0.79
HOXD9-201ENST00000249499 GPER1Q99527 375 aa20.01■□□□□ 0.79
HOXD9-201ENST00000249499 GAL3ST1Q99999 423 aa20.01■□□□□ 0.79
HOXD9-201ENST00000249499 OR2H1Q9GZK4 316 aa20.01■□□□□ 0.79
HOXD9-201ENST00000249499 LPAR5Q9H1C0 372 aa20.01■□□□□ 0.79
HOXD9-201ENST00000249499 SLC6A15Q9H2J7 730 aa20.01■□□□□ 0.79
HOXD9-201ENST00000249499 SCP2D1Q9UJQ7 156 aa20.01■□□□□ 0.79
HOXD9-201ENST00000249499 C5orf63A6NC05 138 aa20.01■□□□□ 0.79
HOXD9-201ENST00000249499 MEIS3P1A6NDR6 274 aa20.01■□□□□ 0.79
HOXD9-201ENST00000249499 PYCARD-AS1I3L0S3 204 aa20.01■□□□□ 0.79
HOXD9-201ENST00000249499 TBPP20226 339 aa20.01■□□□□ 0.79
HOXD9-201ENST00000249499 MPZP25189 248 aa20.01■□□□□ 0.79
HOXD9-201ENST00000249499 RFC3P40938 356 aa20.01■□□□□ 0.79
HOXD9-201ENST00000249499 ZNF774Q6NX45 483 aa20.01■□□□□ 0.79
HOXD9-201ENST00000249499 IGF2-ASQ6U949 168 aa20.01■□□□□ 0.79
HOXD9-201ENST00000249499 SGK3Q96BR1 496 aa20.01■□□□□ 0.79
HOXD9-201ENST00000249499 URM1Q9BTM9 101 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms