RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 GFOD2Q3B7J2 385 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 SLC25A47Q6Q0C1 308 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 ATRAIDQ6UW56 229 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 CYYR1Q96J86 154 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 FAM71F1Q96KD3 344 aaPredicted RBP12.72□□□□□ -0.37
HIF3A-202ENST00000244303 ZNF75AQ96N20 296 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 B3GALT1Q9Y5Z6 326 aa12.72□□□□□ -0.37
HIF3A-202ENST00000244303 EFSO43281 561 aa12.71□□□□□ -0.37
HIF3A-202ENST00000244303 BCL2L11O43521 198 aa12.71□□□□□ -0.37
HIF3A-202ENST00000244303 MPIG6BO95866 241 aa12.71□□□□□ -0.37
HIF3A-202ENST00000244303 STARP49675 285 aa12.71□□□□□ -0.37
HIF3A-202ENST00000244303 ZNF169Q14929 603 aaPredicted RBP12.71□□□□□ -0.37
HIF3A-202ENST00000244303 ZNF385CQ66K41 422 aaPredicted RBP12.71□□□□□ -0.37
HIF3A-202ENST00000244303 KCTD9Q7L273 389 aa12.71□□□□□ -0.37
HIF3A-202ENST00000244303 WDR5BQ86VZ2 330 aa12.71□□□□□ -0.37
HIF3A-202ENST00000244303 EIF4E3Q8N5X7 224 aaKnown RBP12.71□□□□□ -0.37
HIF3A-202ENST00000244303 OR10K1Q8NGX5 313 aa12.71□□□□□ -0.37
HIF3A-202ENST00000244303 OR4K15Q8NH41 348 aa12.71□□□□□ -0.37
HIF3A-202ENST00000244303 C1orf147Q96MC9 270 aaPredicted RBP12.71□□□□□ -0.37
HIF3A-202ENST00000244303 GUCD1Q96NT3 240 aa12.71□□□□□ -0.37
HIF3A-202ENST00000244303 NUDT16L1Q9BRJ7 211 aaKnown RBP12.71□□□□□ -0.37
HIF3A-202ENST00000244303 PNRC2Q9NPJ4 139 aaKnown RBP12.71□□□□□ -0.37
HIF3A-202ENST00000244303 RASL12Q9NYN1 266 aa12.71□□□□□ -0.37
HIF3A-202ENST00000244303 TAS2R3Q9NYW6 316 aa12.71□□□□□ -0.37
HIF3A-202ENST00000244303 A0A1W2PP11 408 aa12.71□□□□□ -0.38
HIF3A-202ENST00000244303 SIGLEC5O15389 551 aa12.71□□□□□ -0.38
HIF3A-202ENST00000244303 SOCS1O15524 211 aa12.71□□□□□ -0.38
HIF3A-202ENST00000244303 QDPRP09417 244 aa12.71□□□□□ -0.38
HIF3A-202ENST00000244303 ZNF17P17021 662 aa12.71□□□□□ -0.38
HIF3A-202ENST00000244303 ZNF43P17038 809 aa12.71□□□□□ -0.38
HIF3A-202ENST00000244303 CX3CR1P49238 355 aa12.71□□□□□ -0.38
HIF3A-202ENST00000244303 SIGLEC14Q08ET2 396 aa12.71□□□□□ -0.38
HIF3A-202ENST00000244303 PLAC9Q5JTB6 97 aa12.71□□□□□ -0.38
HIF3A-202ENST00000244303 FAHD2BQ6P2I3 314 aaPredicted RBP12.71□□□□□ -0.38
HIF3A-202ENST00000244303 ACOT7LQ6ZUV0 252 aa12.71□□□□□ -0.38
HIF3A-202ENST00000244303 OR6X1Q8NH79 312 aa12.71□□□□□ -0.38
HIF3A-202ENST00000244303 MAFAQ8NHW3 353 aaPredicted RBP12.71□□□□□ -0.38
HIF3A-202ENST00000244303 SLC22A8Q8TCC7 542 aa12.71□□□□□ -0.38
HIF3A-202ENST00000244303 MARCH1Q8TCQ1 289 aa12.71□□□□□ -0.38
HIF3A-202ENST00000244303 LRRC46Q96FV0 321 aa12.71□□□□□ -0.38
HIF3A-202ENST00000244303 FAHD2AQ96GK7 314 aa12.71□□□□□ -0.38
HIF3A-202ENST00000244303 TMEM41AQ96HV5 264 aa12.71□□□□□ -0.38
HIF3A-202ENST00000244303 NARS2Q96I59 477 aaKnown RBP12.71□□□□□ -0.38
HIF3A-202ENST00000244303 OXGR1Q96P68 337 aa12.71□□□□□ -0.38
HIF3A-202ENST00000244303 RASL10BQ96S79 203 aa12.71□□□□□ -0.38
HIF3A-202ENST00000244303 ZNF471Q9BX82 626 aaPredicted RBP12.71□□□□□ -0.38
HIF3A-202ENST00000244303 BANF2Q9H503 90 aa12.71□□□□□ -0.38
HIF3A-202ENST00000244303 GAREM1Q9H706 876 aa12.71□□□□□ -0.38
HIF3A-202ENST00000244303 MYO7BQ6PIF6 2116 aa12.7□□□□□ -0.38
HIF3A-202ENST00000244303 C19orf67A6NJJ6 358 aa12.7□□□□□ -0.38
HIF3A-202ENST00000244303 CDC14BO60729 498 aa12.7□□□□□ -0.38
HIF3A-202ENST00000244303 ONECUT2O95948 504 aa12.7□□□□□ -0.38
HIF3A-202ENST00000244303 PDGFBP01127 241 aaPredicted RBP12.7□□□□□ -0.38
HIF3A-202ENST00000244303 CHRM2P08172 466 aa12.7□□□□□ -0.38
HIF3A-202ENST00000244303 HCKP08631 526 aa12.7□□□□□ -0.38
HIF3A-202ENST00000244303 TBPP20226 339 aa12.7□□□□□ -0.38
HIF3A-202ENST00000244303 MICBQ29980 383 aa12.7□□□□□ -0.38
HIF3A-202ENST00000244303 TMEM176BQ3YBM2 270 aaPredicted RBP12.7□□□□□ -0.38
HIF3A-202ENST00000244303 FAM57BQ71RH2 274 aa12.7□□□□□ -0.38
HIF3A-202ENST00000244303 OR2W3Q7Z3T1 314 aa12.7□□□□□ -0.38
HIF3A-202ENST00000244303 WDSUB1Q8N9V3 476 aa12.7□□□□□ -0.38
HIF3A-202ENST00000244303 OR10Z1Q8NGY1 313 aa12.7□□□□□ -0.38
HIF3A-202ENST00000244303 RAB3CQ96E17 227 aa12.7□□□□□ -0.38
HIF3A-202ENST00000244303 AKIRIN1Q9H9L7 192 aaPredicted RBP12.7□□□□□ -0.38
HIF3A-202ENST00000244303 EEF1E1-BLOC1S5C9J1V9 151 aa12.69□□□□□ -0.38
HIF3A-202ENST00000244303 CFIP05156 583 aa12.69□□□□□ -0.38
HIF3A-202ENST00000244303 HIST3H3Q16695 136 aa12.69□□□□□ -0.38
HIF3A-202ENST00000244303 DMRTC1Q5HYR2 192 aa12.69□□□□□ -0.38
HIF3A-202ENST00000244303 PRAMEF20Q5VT98 475 aa12.69□□□□□ -0.38
HIF3A-202ENST00000244303 ELP2Q6IA86 826 aa12.69□□□□□ -0.38
HIF3A-202ENST00000244303 PGAP1Q75T13 922 aa12.69□□□□□ -0.38
HIF3A-202ENST00000244303 HOGA1Q86XE5 327 aa12.69□□□□□ -0.38
HIF3A-202ENST00000244303 PPP1R3BQ86XI6 285 aa12.69□□□□□ -0.38
HIF3A-202ENST00000244303 ZNF283Q8N7M2 679 aa12.69□□□□□ -0.38
HIF3A-202ENST00000244303 MARC2Q969Z3 335 aa12.69□□□□□ -0.38
HIF3A-202ENST00000244303 SPACA9Q96E40 222 aaPredicted RBP12.69□□□□□ -0.38
HIF3A-202ENST00000244303 DEFB126Q9BYW3 111 aa12.69□□□□□ -0.38
HIF3A-202ENST00000244303 OCIAD1Q9NX40 245 aa12.69□□□□□ -0.38
HIF3A-202ENST00000244303 ZNF726A6NNF4 738 aa12.69□□□□□ -0.38
HIF3A-202ENST00000244303 DUS4LO95620 317 aaKnown RBP12.69□□□□□ -0.38
HIF3A-202ENST00000244303 TDGF1P13385 188 aa12.69□□□□□ -0.38
HIF3A-202ENST00000244303 HIST1H1DP16402 221 aaKnown RBP12.69□□□□□ -0.38
HIF3A-202ENST00000244303 ARHGDIBP52566 201 aa12.69□□□□□ -0.38
HIF3A-202ENST00000244303 TMEM50BP56557 158 aa12.69□□□□□ -0.38
HIF3A-202ENST00000244303 MC2RQ01718 297 aa12.69□□□□□ -0.38
HIF3A-202ENST00000244303 CLRN3Q8NCR9 226 aa12.69□□□□□ -0.38
HIF3A-202ENST00000244303 OR4K17Q8NGC6 315 aa12.69□□□□□ -0.38
HIF3A-202ENST00000244303 KCNG3Q8TAE7 436 aa12.69□□□□□ -0.38
HIF3A-202ENST00000244303 THAP6Q8TBB0 222 aa12.69□□□□□ -0.38
HIF3A-202ENST00000244303 NAT6Q93015 286 aa12.69□□□□□ -0.38
HIF3A-202ENST00000244303 ZC3H10Q96K80 434 aaKnown RBP12.69□□□□□ -0.38
HIF3A-202ENST00000244303 GPER1Q99527 375 aa12.69□□□□□ -0.38
HIF3A-202ENST00000244303 TMEM59Q9BXS4 323 aa12.69□□□□□ -0.38
HIF3A-202ENST00000244303 BARX1Q9HBU1 254 aaPredicted RBP12.69□□□□□ -0.38
HIF3A-202ENST00000244303 AQP7P3A6NL99 342 aa12.68□□□□□ -0.38
HIF3A-202ENST00000244303 E9PLN8 166 aa12.68□□□□□ -0.38
HIF3A-202ENST00000244303 DNASE2O00115 360 aaPredicted RBP12.68□□□□□ -0.38
HIF3A-202ENST00000244303 SULT2B1O00204 365 aa12.68□□□□□ -0.38
HIF3A-202ENST00000244303 KCNAB3O43448 404 aa12.68□□□□□ -0.38
HIF3A-202ENST00000244303 DKK1O94907 266 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms