RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 ATXN7L3Q14CW9 347 aaPredicted RBP7.6□□□□□ -1.19
VPS4B-201ENST00000238497 AWAT2Q6E213 333 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 C17orf107Q6ZR85 190 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 RNF144BQ7Z419 303 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 SLC43A2Q8N370 569 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 OR52N4Q8NGI2 321 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 OR51S1Q8NGJ8 323 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 CASTOR1Q8WTX7 329 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 MAFIPQ8WZ33 124 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 TRIM63Q969Q1 353 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 CREB3L1Q96BA8 519 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 MRGPRX4Q96LA9 322 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 SELENOIQ9C0D9 397 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 PROK2Q9HC23 129 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 FOXJ3Q9UPW0 622 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 OR14I1A6ND48 311 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 EEF1E1-BLOC1S5C9J1V9 151 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 TEX46H3BTG2 121 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 AQP7O14520 342 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 ADAM10O14672 748 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 PHYHO14832 338 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 AMY2AP04746 511 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 ZNF121P58317 390 aaPredicted RBP7.6□□□□□ -1.19
VPS4B-201ENST00000238497 IFITM2Q01629 132 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 CDNFQ49AH0 187 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 C1orf185Q5T7R7 199 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 TMEM81Q6P7N7 255 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 ANGPTL5Q86XS5 388 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 ASB17Q8WXJ9 295 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 MARVELD1Q9BSK0 173 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 ANGPTL4Q9BY76 406 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 ULBP2Q9BZM5 246 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 C20orf85Q9H1P6 137 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 GPR84Q9NQS5 396 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 MGAT4CQ9UBM8 478 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 F8P00451 2351 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 A0A1W2PP11 408 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 CENPBD1B2RD01 187 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 TXNDC12O95881 172 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 IL2RAP01589 272 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 IFI6P09912 130 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 NAT2P11245 290 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 NAGAP17050 411 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 PSMB1P20618 241 aaKnown RBP7.59□□□□□ -1.19
VPS4B-201ENST00000238497 GALP22466 123 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 MMP15P51511 669 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 ZNF704Q6ZNC4 412 aaPredicted RBP7.59□□□□□ -1.19
VPS4B-201ENST00000238497 TMPPEQ6ZT21 453 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.59□□□□□ -1.19
VPS4B-201ENST00000238497 NUDCD2Q8WVJ2 157 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 PIGTQ969N2 578 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 CYYR1Q96J86 154 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 S100A13Q99584 98 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 SOSTQ9BQB4 213 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 ZNF416Q9BWM5 594 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 PBOV1Q9GZY1 135 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 NCOA6Q14686 2063 aaPredicted RBP7.59□□□□□ -1.19
VPS4B-201ENST00000238497 WDR1O75083 606 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 IGHG3P01860 377 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 ACSM4P0C7M7 580 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 PRF1P14222 555 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 GABRA1P14867 456 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 VAMP1P23763 118 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 DNASE1P24855 282 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 CARD18P57730 90 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 AP3S2P59780 193 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 PSMA6P60900 246 aaKnown RBP7.59□□□□□ -1.19
VPS4B-201ENST00000238497 FAPQ12884 760 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 ARFRP1Q13795 201 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 MOGAT2Q3SYC2 334 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 OR52W1Q6IF63 320 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 Q6ZTK2 550 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 P4HA3Q7Z4N8 544 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 OR8H3Q8N146 312 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 GVQW1Q8N7I0 195 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 OR4D6Q8NGJ1 314 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 OR2AE1Q8NHA4 323 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 SMIM4Q8WVI0 70 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 ADAT3Q96EY9 351 aaPredicted RBP7.59□□□□□ -1.19
VPS4B-201ENST00000238497 DMRTA2Q96SC8 542 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 KCNJ15Q99712 375 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 SLC6A7Q99884 636 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 DPCDQ9BVM2 203 aaPredicted RBP7.59□□□□□ -1.19
VPS4B-201ENST00000238497 OR2B2Q9GZK3 357 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 MOV10Q9HCE1 1003 aaKnown RBP7.59□□□□□ -1.19
VPS4B-201ENST00000238497 R4GMQ9 66 aa7.59□□□□□ -1.19
VPS4B-201ENST00000238497 A0A096LPE4 126 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 A0A0J9YW62 118 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 IGHV3-64DA0A0J9YX35 117 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 A0A1W2PPZ6 126 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 C5orf63A6NC05 138 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 ZNF254O75437 659 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 CBR3O75828 277 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 GUSBP08236 651 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 GLI4P10075 376 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 B4GALT1P15291 398 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 PDCD1Q15116 288 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 Q5BKY6 102 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 ZNF684Q5T5D7 378 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 RTN4RL2Q86UN3 420 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms