RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 ZSCAN5BA6NJL1 495 aa20.12■□□□□ 0.81
HOMER3-201ENST00000221222 LILRA1O75019 489 aa20.12■□□□□ 0.81
HOMER3-201ENST00000221222 HTR1AP08908 422 aa20.12■□□□□ 0.81
HOMER3-201ENST00000221222 KIR3DL2P43630 455 aa20.12■□□□□ 0.81
HOMER3-201ENST00000221222 TGM4P49221 684 aa20.12■□□□□ 0.81
HOMER3-201ENST00000221222 CCR9P51686 369 aa20.12■□□□□ 0.81
HOMER3-201ENST00000221222 GBX2P52951 348 aaPredicted RBP20.12■□□□□ 0.81
HOMER3-201ENST00000221222 NANOS3P60323 173 aaKnown RBP20.12■□□□□ 0.81
HOMER3-201ENST00000221222 TNK1Q13470 666 aa20.12■□□□□ 0.81
HOMER3-201ENST00000221222 Q6ZR03 302 aa20.12■□□□□ 0.81
HOMER3-201ENST00000221222 BHLHE23Q8NDY6 225 aa20.12■□□□□ 0.81
HOMER3-201ENST00000221222 OR56B2PQ8NGI1 322 aa20.12■□□□□ 0.81
HOMER3-201ENST00000221222 DIRC2Q96SL1 478 aa20.12■□□□□ 0.81
HOMER3-201ENST00000221222 SLC30A2Q9BRI3 323 aa20.12■□□□□ 0.81
HOMER3-201ENST00000221222 YTHDF1Q9BYJ9 559 aaKnown RBP20.12■□□□□ 0.81
HOMER3-201ENST00000221222 MSL2Q9HCI7 577 aa20.12■□□□□ 0.81
HOMER3-201ENST00000221222 GPR84Q9NQS5 396 aa20.12■□□□□ 0.81
HOMER3-201ENST00000221222 NKIRAS2Q9NYR9 191 aa20.12■□□□□ 0.81
HOMER3-201ENST00000221222 FRRS1LQ9P0K9 344 aa20.12■□□□□ 0.81
HOMER3-201ENST00000221222 ZDHHC8Q9ULC8 765 aa20.12■□□□□ 0.81
HOMER3-201ENST00000221222 NF1P21359 2839 aa20.12■□□□□ 0.81
HOMER3-201ENST00000221222 LOC390937A0A1W2PQ73 354 aa20.11■□□□□ 0.81
HOMER3-201ENST00000221222 NDUFS7O75251 213 aa20.11■□□□□ 0.81
HOMER3-201ENST00000221222 ERCC1P07992 297 aaPredicted RBP20.11■□□□□ 0.81
HOMER3-201ENST00000221222 CD99P14209 185 aa20.11■□□□□ 0.81
HOMER3-201ENST00000221222 ATP6V1B1P15313 513 aa20.11■□□□□ 0.81
HOMER3-201ENST00000221222 ATP5J2P56134 94 aa20.11■□□□□ 0.81
HOMER3-201ENST00000221222 PCGF3Q3KNV8 242 aa20.11■□□□□ 0.81
HOMER3-201ENST00000221222 Q6ZSR3 168 aa20.11■□□□□ 0.81
HOMER3-201ENST00000221222 PLPP7Q8NBV4 271 aa20.11■□□□□ 0.81
HOMER3-201ENST00000221222 NEU4Q8WWR8 484 aaPredicted RBP20.11■□□□□ 0.81
HOMER3-201ENST00000221222 PERPQ96FX8 193 aa20.11■□□□□ 0.81
HOMER3-201ENST00000221222 SOX7Q9BT81 388 aa20.11■□□□□ 0.81
HOMER3-201ENST00000221222 TPK1Q9H3S4 243 aa20.11■□□□□ 0.81
HOMER3-201ENST00000221222 MRPL15Q9P015 296 aaKnown RBP20.11■□□□□ 0.81
HOMER3-201ENST00000221222 ERVK-18Q9QC07 812 aa20.11■□□□□ 0.81
HOMER3-201ENST00000221222 A0A1B0GTI1 187 aa20.1■□□□□ 0.81
HOMER3-201ENST00000221222 E9PI62 339 aa20.1■□□□□ 0.81
HOMER3-201ENST00000221222 RGS10O43665 173 aa20.1■□□□□ 0.81
HOMER3-201ENST00000221222 IGHV1-46P01743 117 aa20.1■□□□□ 0.81
HOMER3-201ENST00000221222 IGHV4-39P01824 125 aa20.1■□□□□ 0.81
HOMER3-201ENST00000221222 CCL1P22362 96 aa20.1■□□□□ 0.81
HOMER3-201ENST00000221222 EFNA4P52798 201 aa20.1■□□□□ 0.81
HOMER3-201ENST00000221222 ALKBH1Q13686 389 aaKnown RBP20.1■□□□□ 0.81
HOMER3-201ENST00000221222 IRF3Q14653 427 aa20.1■□□□□ 0.81
HOMER3-201ENST00000221222 CCDC58Q4VC31 144 aa20.1■□□□□ 0.81
HOMER3-201ENST00000221222 NANOGP1Q8N7R0 232 aa20.1■□□□□ 0.81
HOMER3-201ENST00000221222 OR13G1Q8NGZ3 307 aa20.1■□□□□ 0.81
HOMER3-201ENST00000221222 BARX1Q9HBU1 254 aaPredicted RBP20.1■□□□□ 0.81
HOMER3-201ENST00000221222 BABAM2Q9NXR7 383 aa20.1■□□□□ 0.81
HOMER3-201ENST00000221222 ERGIC3Q9Y282 383 aa20.1■□□□□ 0.81
HOMER3-201ENST00000221222 MYL12BO14950 172 aa20.09■□□□□ 0.81
HOMER3-201ENST00000221222 F12P00748 615 aaPredicted RBP20.09■□□□□ 0.81
HOMER3-201ENST00000221222 CD55P08174 381 aa20.09■□□□□ 0.81
HOMER3-201ENST00000221222 UBCP0CG48 685 aaKnown RBP20.09■□□□□ 0.81
HOMER3-201ENST00000221222 ACKR3P25106 362 aa20.09■□□□□ 0.81
HOMER3-201ENST00000221222 GABARAPL2P60520 117 aa20.09■□□□□ 0.81
HOMER3-201ENST00000221222 FAM209AQ5JX71 171 aa20.09■□□□□ 0.81
HOMER3-201ENST00000221222 PRSS48Q7RTY5 328 aa20.09■□□□□ 0.81
HOMER3-201ENST00000221222 COMMD2Q86X83 199 aa20.09■□□□□ 0.81
HOMER3-201ENST00000221222 CSNK2A3Q8NEV1 391 aa20.09■□□□□ 0.81
HOMER3-201ENST00000221222 RPS4Y2Q8TD47 263 aa20.09■□□□□ 0.81
HOMER3-201ENST00000221222 TMUB1Q9BVT8 246 aa20.09■□□□□ 0.81
HOMER3-201ENST00000221222 SLC22A4Q9H015 551 aa20.09■□□□□ 0.81
HOMER3-201ENST00000221222 CXXC4Q9H2H0 198 aa20.09■□□□□ 0.81
HOMER3-201ENST00000221222 TMEM100Q9NV29 134 aa20.09■□□□□ 0.81
HOMER3-201ENST00000221222 OR4C45A6NMZ5 311 aa20.08■□□□□ 0.81
HOMER3-201ENST00000221222 P2RY10O00398 339 aa20.08■□□□□ 0.81
HOMER3-201ENST00000221222 SPRY3O43610 288 aa20.08■□□□□ 0.81
HOMER3-201ENST00000221222 DHRS3O75911 302 aa20.08■□□□□ 0.81
HOMER3-201ENST00000221222 ISG15P05161 165 aa20.08■□□□□ 0.81
HOMER3-201ENST00000221222 MAP2K3P46734 347 aa20.08■□□□□ 0.81
HOMER3-201ENST00000221222 WNT4P56705 351 aa20.08■□□□□ 0.81
HOMER3-201ENST00000221222 DOK3Q7L591 496 aa20.08■□□□□ 0.81
HOMER3-201ENST00000221222 KRT74Q7RTS7 529 aa20.08■□□□□ 0.81
HOMER3-201ENST00000221222 KLBQ86Z14 1044 aa20.08■□□□□ 0.81
HOMER3-201ENST00000221222 TGIF2LYQ8IUE0 185 aa20.08■□□□□ 0.81
HOMER3-201ENST00000221222 GATAD2BQ8WXI9 593 aa20.08■□□□□ 0.81
HOMER3-201ENST00000221222 FAM71F1Q96KD3 344 aaPredicted RBP20.08■□□□□ 0.81
HOMER3-201ENST00000221222 MND1Q9BWT6 205 aa20.08■□□□□ 0.81
HOMER3-201ENST00000221222 TRIM36Q9NQ86 728 aa20.08■□□□□ 0.81
HOMER3-201ENST00000221222 DHRS7CA6NNS2 312 aa20.08■□□□□ 0.8
HOMER3-201ENST00000221222 MLNRO43193 412 aa20.08■□□□□ 0.8
HOMER3-201ENST00000221222 MTRF1O75570 445 aaKnown RBP20.08■□□□□ 0.8
HOMER3-201ENST00000221222 MAGEB1P43366 347 aa20.08■□□□□ 0.8
HOMER3-201ENST00000221222 GTF2A1P52655 376 aaPredicted RBP20.08■□□□□ 0.8
HOMER3-201ENST00000221222 ODF4Q2M2E3 257 aa20.08■□□□□ 0.8
HOMER3-201ENST00000221222 TMEM244Q5VVB8 128 aa20.08■□□□□ 0.8
HOMER3-201ENST00000221222 XAF1Q6GPH4 301 aa20.08■□□□□ 0.8
HOMER3-201ENST00000221222 RPL22L1Q6P5R6 122 aaKnown RBP20.08■□□□□ 0.8
HOMER3-201ENST00000221222 FTMTQ8N4E7 242 aa20.08■□□□□ 0.8
HOMER3-201ENST00000221222 CCDC54Q8NEL0 328 aa20.08■□□□□ 0.8
HOMER3-201ENST00000221222 NOP16Q9Y3C1 178 aaKnown RBP20.08■□□□□ 0.8
HOMER3-201ENST00000221222 V9GYS6 101 aa20.08■□□□□ 0.8
HOMER3-201ENST00000221222 A0A1B0GVI7 797 aa20.07■□□□□ 0.8
HOMER3-201ENST00000221222 ANKRD30BLA7E2S9 258 aa20.07■□□□□ 0.8
HOMER3-201ENST00000221222 OGG1O15527 345 aa20.07■□□□□ 0.8
HOMER3-201ENST00000221222 MRPS14O60783 128 aaKnown RBP20.07■□□□□ 0.8
HOMER3-201ENST00000221222 NCR1O76036 304 aa20.07■□□□□ 0.8
HOMER3-201ENST00000221222 LALBAP00709 142 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 281 ms