RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 OR5I1Q13606 314 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 CD226Q15762 336 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 XKR7Q5GH72 579 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 PRR14LQ5THK1 2151 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 ALKAL2Q6UX46 152 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 NFAM1Q8NET5 270 aaPredicted RBP5.53□□□□□ -1.52
VPS13D-201ENST00000011700 IFI44Q8TCB0 444 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 SCMH1Q96GD3 660 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 ANKUB1A6NFN9 424 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 POU2F2P09086 479 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 AKR1C3P42330 323 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 CCR5P51681 352 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 PRDX4Q13162 271 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 IL11RAQ14626 422 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 SIX1Q15475 284 aaPredicted RBP5.53□□□□□ -1.52
VPS13D-201ENST00000011700 VMA21Q3ZAQ7 101 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 OR8G2PQ6IF36 304 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 MOB3CQ70IA8 216 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 AMIGO3Q86WK7 504 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 PTOV1Q86YD1 416 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 GPR119Q8TDV5 335 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 WFIKKN1Q96NZ8 548 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 BOCQ9BWV1 1114 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 COL24A1Q17RW2 1714 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 A0A0B4J2A0 478 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 SSSCA1O60232 199 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 DIO1P49895 249 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 RPEL1Q2QD12 228 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 CLECL1Q8IZS7 167 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 DNAJC5GQ8N7S2 189 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 OR52E1Q8NGJ3 308 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 UTP4Q969X6 686 aaKnown RBP5.53□□□□□ -1.52
VPS13D-201ENST00000011700 WDR34Q96EX3 536 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 SHPKQ9UHJ6 478 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 NLRC5Q86WI3 1866 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 SSTR4P31391 388 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 ARRB2P32121 409 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 NPY4RP50391 375 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 FOXO1Q12778 655 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 TMEM176BQ3YBM2 270 aaPredicted RBP5.53□□□□□ -1.52
VPS13D-201ENST00000011700 MFSD12Q6NUT3 480 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 SEZ6L2Q6UXD5 910 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 SH2D2AQ9NP31 389 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 OR6C3Q9NZP0 311 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 ADAMTS5Q9UNA0 930 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 SNX11Q9Y5W9 270 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 BCAT2O15382 392 aaPredicted RBP5.53□□□□□ -1.52
VPS13D-201ENST00000011700 HIST1H1EP10412 219 aaKnown RBP5.53□□□□□ -1.52
VPS13D-201ENST00000011700 PRRX1P54821 245 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 FUT7Q11130 342 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 HYAL2Q12891 473 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 SLC9A3R2Q15599 337 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 RPS26P11Q5JNZ5 115 aaPredicted RBP5.53□□□□□ -1.52
VPS13D-201ENST00000011700 RHOUQ7L0Q8 258 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 LINC00615Q96LM1 132 aaPredicted RBP5.53□□□□□ -1.52
VPS13D-201ENST00000011700 OXGR1Q96P68 337 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 CTRCQ99895 268 aa5.53□□□□□ -1.52
VPS13D-201ENST00000011700 FGF20Q9NP95 211 aaPredicted RBP5.53□□□□□ -1.52
VPS13D-201ENST00000011700 C19orf53Q9UNZ5 99 aaPredicted RBP5.53□□□□□ -1.52
VPS13D-201ENST00000011700 TRBV4-1A0A0J9YWV2 114 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 CDK2AP1O14519 115 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 CSO75390 466 aaKnown RBP5.52□□□□□ -1.53
VPS13D-201ENST00000011700 SIX6O95475 246 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 ACAA1P09110 424 aaPredicted RBP5.52□□□□□ -1.53
VPS13D-201ENST00000011700 Q7L0L9 218 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 GABRQQ9UN88 632 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 TMEM30CPA0ZSE6 113 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 IGSF23A1L1A6 192 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 ZNF860A6NHJ4 632 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 IFNL4K9M1U5 179 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 M0R135 149 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 CRYAAP02489 173 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 RPL24P83731 157 aaKnown RBP5.52□□□□□ -1.53
VPS13D-201ENST00000011700 SERF2P84101 59 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 TRA2AQ13595 282 aaKnown RBP eCLIP5.52□□□□□ -1.53
VPS13D-201ENST00000011700 ZNF718Q3SXZ3 478 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 ZDHHC23Q8IYP9 409 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 ZNF799Q96GE5 643 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 TMEM191AQ9H0A3 160 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 PDLIM7Q9NR12 457 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 OR1A1Q9P1Q5 309 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 PLAGL1Q9UM63 463 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 TRBV9A0A0B4J1U6 114 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 SERTM1A2A2V5 107 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 SIGLEC6O43699 453 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 RPS4Y1P22090 263 aaKnown RBP5.52□□□□□ -1.53
VPS13D-201ENST00000011700 MEOX1P50221 254 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 BIDP55957 195 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 PRAMEF5Q5TYX0 476 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 PRAMEF6Q5VXH4 476 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 OR2T2Q6IF00 324 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 WDTC1Q8N5D0 677 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 OR52N4Q8NGI2 321 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 PTX4Q96A99 478 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 C11orf54Q9H0W9 315 aaPredicted RBP5.52□□□□□ -1.53
VPS13D-201ENST00000011700 TAAR3PQ9P1P4 343 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 LRIT1Q9P2V4 623 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 TIMM9Q9Y5J7 89 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 CORTO00230 105 aa5.52□□□□□ -1.53
VPS13D-201ENST00000011700 COX7A2P2O60397 106 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms