RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 OR1N2Q8NGR9 330 aa17.67■□□□□ 0.42
CACNA1A-257ENST00000638009 SMG9Q9H0W8 520 aaKnown RBP17.67■□□□□ 0.42
CACNA1A-257ENST00000638009 CEBPDP49716 269 aaPredicted RBP17.67■□□□□ 0.42
CACNA1A-257ENST00000638009 PKIAP61925 76 aa17.67■□□□□ 0.42
CACNA1A-257ENST00000638009 PITPNC1Q9UKF7 332 aa17.67■□□□□ 0.42
CACNA1A-257ENST00000638009 TXNRD3NBQ6F5E7 133 aa17.67■□□□□ 0.42
CACNA1A-257ENST00000638009 ETV3LQ6ZN32 361 aa17.67■□□□□ 0.42
CACNA1A-257ENST00000638009 TMIGD2Q96BF3 282 aa17.67■□□□□ 0.42
CACNA1A-257ENST00000638009 ZNF2Q9BSG1 426 aaPredicted RBP17.67■□□□□ 0.42
CACNA1A-257ENST00000638009 CTSLP07711 333 aa17.67■□□□□ 0.42
CACNA1A-257ENST00000638009 MLF2Q15773 248 aaPredicted RBP17.67■□□□□ 0.42
CACNA1A-257ENST00000638009 ZBTB37Q5TC79 503 aa17.67■□□□□ 0.42
CACNA1A-257ENST00000638009 LYG2Q86SG7 212 aa17.67■□□□□ 0.42
CACNA1A-257ENST00000638009 PIAS3Q9Y6X2 628 aa17.67■□□□□ 0.42
CACNA1A-257ENST00000638009 XRCC2O43543 280 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 NUDT3O95989 172 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 YRDCQ86U90 279 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 DNAL4O96015 105 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 GYPAP02724 150 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 ACP1P24666 158 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 RAB38P57729 211 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 FAM3AP98173 230 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 RIGQ13278 110 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 LRRC15Q8TF66 581 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 P2RY12Q9H244 342 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 DRGXA6NNA5 263 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 TRAT1Q6PIZ9 186 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 NAA60Q9H7X0 242 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 CLN3Q13286 438 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 DCXRQ7Z4W1 244 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 SP1P08047 785 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 OR4A47Q6IF82 309 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 C12orf54Q6X4T0 127 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 ZNF738Q8NE65 137 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 CORTO00230 105 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 PIPP12273 146 aaPredicted RBP17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 SLC7A10Q9NS82 523 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 CLDN34H7C241 214 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 NRASP01111 189 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 CYB561P49447 251 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 CLDN12P56749 244 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 TMEM128Q5BJH2 165 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 ZBTB44Q8NCP5 570 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 LHX3Q9UBR4 397 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 ROS1P08922 2347 aa17.66■□□□□ 0.42
CACNA1A-257ENST00000638009 KRASP01116 189 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 C19orf57Q0VDD7 668 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 LRRC10Q5BKY1 277 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 SLC16A12Q6ZSM3 486 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 NUP37Q8NFH4 326 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 PARP12Q9H0J9 701 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 FAM206AQ9NX38 181 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 OCIAD1Q9NX40 245 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 LRP3O75074 770 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 METAP1P53582 386 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 ZADH2Q8N4Q0 377 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 OR4D10Q8NGI6 311 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 TJP1Q07157 1748 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 ZNF840PA6NDX5 716 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 PRLHRP49683 370 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 ZNF816Q0VGE8 651 aaPredicted RBP17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 PRDX4Q13162 271 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 MIDNQ504T8 468 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 RNF2Q99496 336 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 FOXJ3Q9UPW0 622 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 AP4M1O00189 453 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 UTS2O95399 124 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 HRH1P35367 487 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 ZNF766Q5HY98 468 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 GABRG1Q8N1C3 465 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 RAB40CQ96S21 281 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 ZMAT3Q9HA38 289 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 CALHM2Q9HA72 323 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 TOGARAM1Q9Y4F4 1720 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 HEPACAM2A8MVW5 462 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 TBPL2Q6SJ96 375 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 ADRA1AP35348 466 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 SLC6A12P48065 614 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 YPEL5P62699 121 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 CDC20Q12834 499 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 FYTTD1Q96QD9 318 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 UFC1Q9Y3C8 167 aa17.65■□□□□ 0.42
CACNA1A-257ENST00000638009 DOCK4Q8N1I0 1966 aa17.64■□□□□ 0.42
CACNA1A-257ENST00000638009 C3orf30Q96M34 536 aa17.64■□□□□ 0.42
CACNA1A-257ENST00000638009 OR5M10Q6IEU7 315 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 PPP1R1CQ8WVI7 109 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 FRS3O43559 492 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 CDC34P49427 236 aaPredicted RBP17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 SMIM19Q96E16 107 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 USP22Q9UPT9 525 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 PGA4P0DJD7 388 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 PGA5P0DJD9 388 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 SDHAP31040 664 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 AQP6Q13520 282 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 TMEM268Q5VZI3 342 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 IGSF21Q96ID5 467 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 CSF3RQ99062 836 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 CTSFQ9UBX1 484 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 DNASE2O00115 360 aaPredicted RBP17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 OR2G6Q5TZ20 316 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms