RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 PPIAL4FP0DN26 164 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 ZFP36P26651 326 aaKnown RBP11.6□□□□□ -0.55
PNKP-228ENST00000637325 CD200P41217 278 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 CRISP1P54107 249 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 MZT1Q08AG7 82 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 MAB21L1Q13394 359 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 ZNF181Q2M3W8 571 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 ESCO2Q56NI9 601 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 SLC35D3Q5M8T2 416 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 PRAMEF6Q5VXH4 476 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 FAM57BQ71RH2 274 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 TIGD4Q8IY51 512 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 ZNF454Q8N9F8 522 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 OR56B2PQ8NGI1 322 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 UTP4Q969X6 686 aaKnown RBP11.6□□□□□ -0.55
PNKP-228ENST00000637325 PGAM5Q96HS1 289 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 TMPRSS13Q9BYE2 586 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 OR10A2Q9H208 303 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 FN3KRPQ9HA64 309 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 NTN4Q9HB63 628 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 BRD7Q9NPI1 651 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 UFSP2Q9NUQ7 469 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 MRPL15Q9P015 296 aaKnown RBP11.6□□□□□ -0.55
PNKP-228ENST00000637325 MIOXQ9UGB7 285 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 PPIAL4AQ9Y536 164 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 CEACAM18A8MTB9 384 aa11.59□□□□□ -0.55
PNKP-228ENST00000637325 G3V2T6 193 aa11.59□□□□□ -0.55
PNKP-228ENST00000637325 AVPP01185 164 aa11.59□□□□□ -0.55
PNKP-228ENST00000637325 RPS2P15880 293 aaKnown RBP11.59□□□□□ -0.55
PNKP-228ENST00000637325 FASP25445 335 aa11.59□□□□□ -0.55
PNKP-228ENST00000637325 DDOSTP39656 456 aa11.59□□□□□ -0.55
PNKP-228ENST00000637325 PMELP40967 661 aa11.59□□□□□ -0.55
PNKP-228ENST00000637325 NAA10P41227 235 aaPredicted RBP11.59□□□□□ -0.55
PNKP-228ENST00000637325 GATA4P43694 442 aa11.59□□□□□ -0.55
PNKP-228ENST00000637325 DAPP51397 102 aa11.59□□□□□ -0.55
PNKP-228ENST00000637325 ZNF121P58317 390 aaPredicted RBP11.59□□□□□ -0.55
PNKP-228ENST00000637325 ATP6AP1Q15904 470 aa11.59□□□□□ -0.55
PNKP-228ENST00000637325 GFOD2Q3B7J2 385 aa11.59□□□□□ -0.55
PNKP-228ENST00000637325 KRTAP24-1Q3LI83 254 aa11.59□□□□□ -0.55
PNKP-228ENST00000637325 FAHD1Q6P587 224 aa11.59□□□□□ -0.55
PNKP-228ENST00000637325 RHOUQ7L0Q8 258 aa11.59□□□□□ -0.55
PNKP-228ENST00000637325 SPERTQ8NA61 448 aa11.59□□□□□ -0.55
PNKP-228ENST00000637325 BBS1Q8NFJ9 593 aa11.59□□□□□ -0.55
PNKP-228ENST00000637325 OR52H1Q8NGJ2 320 aa11.59□□□□□ -0.55
PNKP-228ENST00000637325 OTOSQ8NHW6 89 aa11.59□□□□□ -0.55
PNKP-228ENST00000637325 NANPQ8TBE9 248 aa11.59□□□□□ -0.55
PNKP-228ENST00000637325 REEP6Q96HR9 211 aa11.59□□□□□ -0.55
PNKP-228ENST00000637325 PRRG3Q9BZD7 231 aa11.59□□□□□ -0.55
PNKP-228ENST00000637325 TMEM165Q9HC07 324 aa11.59□□□□□ -0.55
PNKP-228ENST00000637325 KRT84Q9NSB2 600 aa11.59□□□□□ -0.55
PNKP-228ENST00000637325 OR5V1Q9UGF6 321 aa11.59□□□□□ -0.55
PNKP-228ENST00000637325 AP4S1Q9Y587 144 aa11.59□□□□□ -0.55
PNKP-228ENST00000637325 STAB1Q9NY15 2570 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 PPIAL4CA0A0B4J2A2 164 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 A6NLC8 198 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 F5H0A9 414 aaPredicted RBP11.58□□□□□ -0.56
PNKP-228ENST00000637325 FAM20BO75063 409 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 GRPP07492 148 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 WNT2P09544 360 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 FCGR1AP12314 374 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 ADRA2CP18825 462 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 EPHA1P21709 976 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 ANOS1P23352 680 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 CFL1P23528 166 aaKnown RBP11.58□□□□□ -0.56
PNKP-228ENST00000637325 CPT2P23786 658 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 OPRL1P41146 370 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 SEC61A1P61619 476 aaKnown RBP11.58□□□□□ -0.56
PNKP-228ENST00000637325 ESRRGP62508 458 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 APOFQ13790 326 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 FAM201AQ5SY85 155 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 LCN1P1Q5VSP4 162 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 C1orf229Q6ZS94 237 aaPredicted RBP11.58□□□□□ -0.56
PNKP-228ENST00000637325 NLRC3Q7RTR2 1065 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 SLC16A9Q7RTY1 509 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 C1QL2Q7Z5L3 287 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 KRT77Q7Z794 578 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 KLBQ86Z14 1044 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 ZDHHC13Q8IUH4 622 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 PARP8Q8N3A8 854 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 BOLLQ8N9W6 283 aaKnown RBP11.58□□□□□ -0.56
PNKP-228ENST00000637325 OR8B3Q8NGG8 313 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 OR8S1Q8NH09 359 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 Q8TCH9 128 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 ZNF418Q8TF45 676 aaPredicted RBP11.58□□□□□ -0.56
PNKP-228ENST00000637325 DVL3Q92997 716 aaPredicted RBP11.58□□□□□ -0.56
PNKP-228ENST00000637325 SPSB4Q96A44 273 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 SGK3Q96BR1 496 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 NEIL1Q96FI4 390 aaPredicted RBP11.58□□□□□ -0.56
PNKP-228ENST00000637325 OR8B2Q96RD0 313 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 AMELYQ99218 206 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 TMEM246Q9BRR3 403 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 C19orf24Q9BVV8 132 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 SSBP3Q9BWW4 388 aaPredicted RBP11.58□□□□□ -0.56
PNKP-228ENST00000637325 C14orf119Q9NWQ9 140 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 RNF7Q9UBF6 113 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 LAMP5Q9UJQ1 280 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 LRCH1Q9Y2L9 728 aa11.58□□□□□ -0.56
PNKP-228ENST00000637325 RGS9O75916 674 aaPredicted RBP11.57□□□□□ -0.56
PNKP-228ENST00000637325 GNB2P62879 340 aa11.57□□□□□ -0.56
PNKP-228ENST00000637325 FAM3AP98173 230 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms