RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 ANXA2P07355 339 aaKnown RBP14.99□□□□□ -0.01
PNKP-225ENST00000636214 PPIAL4GP0DN37 164 aa14.99□□□□□ -0.01
PNKP-225ENST00000636214 SLC2A1P11166 492 aa14.99□□□□□ -0.01
PNKP-225ENST00000636214 OTX1P32242 354 aaPredicted RBP14.99□□□□□ -0.01
PNKP-225ENST00000636214 PMELP40967 661 aa14.99□□□□□ -0.01
PNKP-225ENST00000636214 PAX8Q06710 450 aa14.99□□□□□ -0.01
PNKP-225ENST00000636214 BAMBIQ13145 260 aa14.99□□□□□ -0.01
PNKP-225ENST00000636214 EIF2B1Q14232 305 aaKnown RBP14.99□□□□□ -0.01
PNKP-225ENST00000636214 OR8B8Q15620 311 aa14.99□□□□□ -0.01
PNKP-225ENST00000636214 TIGD6Q17RP2 521 aa14.99□□□□□ -0.01
PNKP-225ENST00000636214 SPATC1Q76KD6 591 aa14.99□□□□□ -0.01
PNKP-225ENST00000636214 DOK3Q7L591 496 aa14.99□□□□□ -0.01
PNKP-225ENST00000636214 ERI1Q8IV48 349 aaKnown RBP14.99□□□□□ -0.01
PNKP-225ENST00000636214 PARP8Q8N3A8 854 aa14.99□□□□□ -0.01
PNKP-225ENST00000636214 OR56B2PQ8NGI1 322 aa14.99□□□□□ -0.01
PNKP-225ENST00000636214 OR6N2Q8NGY6 317 aa14.99□□□□□ -0.01
PNKP-225ENST00000636214 OR4Q3Q8NH05 313 aa14.99□□□□□ -0.01
PNKP-225ENST00000636214 GIPC3Q8TF64 312 aa14.99□□□□□ -0.01
PNKP-225ENST00000636214 TECTBQ96PL2 329 aa14.99□□□□□ -0.01
PNKP-225ENST00000636214 INTS14Q96SY0 518 aa14.99□□□□□ -0.01
PNKP-225ENST00000636214 NUDT16L1Q9BRJ7 211 aaKnown RBP14.99□□□□□ -0.01
PNKP-225ENST00000636214 TOR3AQ9H497 397 aa14.99□□□□□ -0.01
PNKP-225ENST00000636214 ESM1Q9NQ30 184 aa14.99□□□□□ -0.01
PNKP-225ENST00000636214 CMC2Q9NRP2 79 aa14.99□□□□□ -0.01
PNKP-225ENST00000636214 C14orf119Q9NWQ9 140 aa14.99□□□□□ -0.01
PNKP-225ENST00000636214 ERVK-18Q9QC07 812 aa14.99□□□□□ -0.01
PNKP-225ENST00000636214 hCG_1807616A0A1W2PRN6 198 aa14.98□□□□□ -0.01
PNKP-225ENST00000636214 FAM107AO95990 144 aa14.98□□□□□ -0.01
PNKP-225ENST00000636214 CD80P33681 288 aa14.98□□□□□ -0.01
PNKP-225ENST00000636214 CX3CR1P49238 355 aa14.98□□□□□ -0.01
PNKP-225ENST00000636214 NPY4RP50391 375 aa14.98□□□□□ -0.01
PNKP-225ENST00000636214 TEX30Q5JUR7 227 aa14.98□□□□□ -0.01
PNKP-225ENST00000636214 PLPP7Q8NBV4 271 aa14.98□□□□□ -0.01
PNKP-225ENST00000636214 OR8S1Q8NH09 359 aa14.98□□□□□ -0.01
PNKP-225ENST00000636214 ZNRF4Q8WWF5 429 aa14.98□□□□□ -0.01
PNKP-225ENST00000636214 ZNF556Q9HAH1 456 aa14.98□□□□□ -0.01
PNKP-225ENST00000636214 VNN3Q9NY84 501 aa14.98□□□□□ -0.01
PNKP-225ENST00000636214 TRAV38-1A0A0B4J264 116 aa14.97□□□□□ -0.01
PNKP-225ENST00000636214 TRAV40A0A0B4J280 105 aa14.97□□□□□ -0.01
PNKP-225ENST00000636214 DHRS12A0PJE2 317 aa14.97□□□□□ -0.01
PNKP-225ENST00000636214 LGALS8O00214 317 aa14.97□□□□□ -0.01
PNKP-225ENST00000636214 ENSAO43768 121 aaKnown RBP14.97□□□□□ -0.01
PNKP-225ENST00000636214 HOXB6P17509 224 aaKnown RBP14.97□□□□□ -0.01
PNKP-225ENST00000636214 PRTN3P24158 256 aa14.97□□□□□ -0.01
PNKP-225ENST00000636214 POU1F1P28069 291 aa14.97□□□□□ -0.01
PNKP-225ENST00000636214 GRK5P34947 590 aa14.97□□□□□ -0.01
PNKP-225ENST00000636214 DDOSTP39656 456 aa14.97□□□□□ -0.01
PNKP-225ENST00000636214 MS4A2Q01362 244 aa14.97□□□□□ -0.01
PNKP-225ENST00000636214 FOXL1Q12952 345 aa14.97□□□□□ -0.01
PNKP-225ENST00000636214 MPPED2Q15777 294 aa14.97□□□□□ -0.01
PNKP-225ENST00000636214 PCK2Q16822 640 aa14.97□□□□□ -0.01
PNKP-225ENST00000636214 KLF17Q5JT82 389 aaPredicted RBP14.97□□□□□ -0.01
PNKP-225ENST00000636214 ZNF362Q5T0B9 420 aaPredicted RBP14.97□□□□□ -0.01
PNKP-225ENST00000636214 CD276Q5ZPR3 534 aa14.97□□□□□ -0.01
PNKP-225ENST00000636214 WDR25Q64LD2 544 aaPredicted RBP14.97□□□□□ -0.01
PNKP-225ENST00000636214 CD300LDQ6UXZ3 194 aa14.97□□□□□ -0.01
PNKP-225ENST00000636214 SHFQ7M4L6 423 aa14.97□□□□□ -0.01
PNKP-225ENST00000636214 C19orf18Q8NEA5 215 aa14.97□□□□□ -0.01
PNKP-225ENST00000636214 SLC25A28Q96A46 364 aa14.97□□□□□ -0.01
PNKP-225ENST00000636214 CHID1Q9BWS9 393 aa14.97□□□□□ -0.01
PNKP-225ENST00000636214 TEX12Q9BXU0 123 aa14.97□□□□□ -0.01
PNKP-225ENST00000636214 NMNAT2Q9BZQ4 307 aa14.97□□□□□ -0.01
PNKP-225ENST00000636214 C1orf123Q9NWV4 160 aa14.97□□□□□ -0.01
PNKP-225ENST00000636214 IGHV3OR16-10A0A075B7F0 116 aa14.96□□□□□ -0.01
PNKP-225ENST00000636214 DNAJC9-AS1A6NH13 148 aa14.96□□□□□ -0.01
PNKP-225ENST00000636214 C3orf80F5H4A9 247 aa14.96□□□□□ -0.01
PNKP-225ENST00000636214 NDUFA2O43678 99 aa14.96□□□□□ -0.01
PNKP-225ENST00000636214 E2F6O75461 281 aa14.96□□□□□ -0.01
PNKP-225ENST00000636214 GRPP07492 148 aa14.96□□□□□ -0.01
PNKP-225ENST00000636214 CLUP10909 449 aa14.96□□□□□ -0.01
PNKP-225ENST00000636214 CFL1P23528 166 aaKnown RBP14.96□□□□□ -0.01
PNKP-225ENST00000636214 GSTT1P30711 240 aa14.96□□□□□ -0.01
PNKP-225ENST00000636214 SNCBQ16143 134 aa14.96□□□□□ -0.01
PNKP-225ENST00000636214 GFOD2Q3B7J2 385 aa14.96□□□□□ -0.01
PNKP-225ENST00000636214 DPY19L4Q7Z388 723 aa14.96□□□□□ -0.01
PNKP-225ENST00000636214 IQCF1Q8N6M8 205 aa14.96□□□□□ -0.01
PNKP-225ENST00000636214 UPRTQ96BW1 309 aa14.96□□□□□ -0.01
PNKP-225ENST00000636214 DUX5Q96PT3 197 aa14.96□□□□□ -0.01
PNKP-225ENST00000636214 NIPSNAP1Q9BPW8 284 aa14.96□□□□□ -0.01
PNKP-225ENST00000636214 THTPAQ9BU02 230 aa14.96□□□□□ -0.01
PNKP-225ENST00000636214 OR10A2Q9H208 303 aa14.96□□□□□ -0.01
PNKP-225ENST00000636214 C1orf21Q9H246 121 aa14.96□□□□□ -0.01
PNKP-225ENST00000636214 OR51V1Q9H2C8 321 aa14.96□□□□□ -0.01
PNKP-225ENST00000636214 DNAJC27Q9NZQ0 273 aa14.96□□□□□ -0.01
PNKP-225ENST00000636214 KIR2DS1A0A191URI9 304 aa14.95□□□□□ -0.02
PNKP-225ENST00000636214 ARRDC5A6NEK1 342 aa14.95□□□□□ -0.02
PNKP-225ENST00000636214 PRR23D1E9PI22 279 aaPredicted RBP14.95□□□□□ -0.02
PNKP-225ENST00000636214 ADAM20O43506 726 aa14.95□□□□□ -0.02
PNKP-225ENST00000636214 PRR23D2P0DMB1 279 aaPredicted RBP14.95□□□□□ -0.02
PNKP-225ENST00000636214 IGHV4-38-2P0DP08 117 aa14.95□□□□□ -0.02
PNKP-225ENST00000636214 PSKH1P11801 424 aa14.95□□□□□ -0.02
PNKP-225ENST00000636214 GNALP38405 381 aa14.95□□□□□ -0.02
PNKP-225ENST00000636214 AWAT1Q58HT5 328 aa14.95□□□□□ -0.02
PNKP-225ENST00000636214 GPR157Q5UAW9 335 aa14.95□□□□□ -0.02
PNKP-225ENST00000636214 SFRP4Q6FHJ7 346 aaPredicted RBP14.95□□□□□ -0.02
PNKP-225ENST00000636214 LYPD2Q6UXB3 125 aa14.95□□□□□ -0.02
PNKP-225ENST00000636214 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.95□□□□□ -0.02
PNKP-225ENST00000636214 BCL6BQ8N143 479 aaPredicted RBP14.95□□□□□ -0.02
PNKP-225ENST00000636214 FTMTQ8N4E7 242 aa14.95□□□□□ -0.02
PNKP-225ENST00000636214 OR52H1Q8NGJ2 320 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms