RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 TMEM246Q9BRR3 403 aa15.9■□□□□ 0.14
CLN6-213ENST00000636212 MMP26Q9NRE1 261 aa15.9■□□□□ 0.14
CLN6-213ENST00000636212 UFSP2Q9NUQ7 469 aa15.9■□□□□ 0.14
CLN6-213ENST00000636212 MRPL15Q9P015 296 aaKnown RBP15.9■□□□□ 0.14
CLN6-213ENST00000636212 PDP1Q9P0J1 537 aaPredicted RBP15.9■□□□□ 0.14
CLN6-213ENST00000636212 PRR23D1E9PI22 279 aaPredicted RBP15.89■□□□□ 0.13
CLN6-213ENST00000636212 TRAPPC2LH3BP13 241 aa15.89■□□□□ 0.13
CLN6-213ENST00000636212 ANXA2P07355 339 aaKnown RBP15.89■□□□□ 0.13
CLN6-213ENST00000636212 PRR23D2P0DMB1 279 aaPredicted RBP15.89■□□□□ 0.13
CLN6-213ENST00000636212 GSTT1P30711 240 aa15.89■□□□□ 0.13
CLN6-213ENST00000636212 DDOSTP39656 456 aa15.89■□□□□ 0.13
CLN6-213ENST00000636212 MAB21L1Q13394 359 aa15.89■□□□□ 0.13
CLN6-213ENST00000636212 TIGD6Q17RP2 521 aa15.89■□□□□ 0.13
CLN6-213ENST00000636212 LRRN1Q6UXK5 716 aa15.89■□□□□ 0.13
CLN6-213ENST00000636212 DCDC5Q6ZRR9 648 aa15.89■□□□□ 0.13
CLN6-213ENST00000636212 SPATC1Q76KD6 591 aa15.89■□□□□ 0.13
CLN6-213ENST00000636212 PLPP7Q8NBV4 271 aa15.89■□□□□ 0.13
CLN6-213ENST00000636212 DEFB108BQ8NET1 73 aa15.89■□□□□ 0.13
CLN6-213ENST00000636212 FAM216AQ8WUB2 273 aa15.89■□□□□ 0.13
CLN6-213ENST00000636212 CANT1Q8WVQ1 401 aa15.89■□□□□ 0.13
CLN6-213ENST00000636212 TRIM36Q9NQ86 728 aa15.89■□□□□ 0.13
CLN6-213ENST00000636212 C14orf119Q9NWQ9 140 aa15.89■□□□□ 0.13
CLN6-213ENST00000636212 RNF7Q9UBF6 113 aa15.89■□□□□ 0.13
CLN6-213ENST00000636212 NUP50Q9UKX7 468 aa15.89■□□□□ 0.13
CLN6-213ENST00000636212 STAB1Q9NY15 2570 aa15.88■□□□□ 0.13
CLN6-213ENST00000636212 FAM183AA6NL82 134 aa15.88■□□□□ 0.13
CLN6-213ENST00000636212 ANKRD30BLA7E2S9 258 aa15.88■□□□□ 0.13
CLN6-213ENST00000636212 FAM20BO75063 409 aa15.88■□□□□ 0.13
CLN6-213ENST00000636212 GLCEO94923 617 aa15.88■□□□□ 0.13
CLN6-213ENST00000636212 HMGN1P05114 100 aa15.88■□□□□ 0.13
CLN6-213ENST00000636212 SLC2A1P11166 492 aa15.88■□□□□ 0.13
CLN6-213ENST00000636212 ANXA8P13928 327 aa15.88■□□□□ 0.13
CLN6-213ENST00000636212 CFL1P23528 166 aaKnown RBP15.88■□□□□ 0.13
CLN6-213ENST00000636212 PITPNBP48739 271 aa15.88■□□□□ 0.13
CLN6-213ENST00000636212 CX3CR1P49238 355 aa15.88■□□□□ 0.13
CLN6-213ENST00000636212 PRAMEF6Q5VXH4 476 aa15.88■□□□□ 0.13
CLN6-213ENST00000636212 DPY19L4Q7Z388 723 aa15.88■□□□□ 0.13
CLN6-213ENST00000636212 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.88■□□□□ 0.13
CLN6-213ENST00000636212 IQCF1Q8N6M8 205 aa15.88■□□□□ 0.13
CLN6-213ENST00000636212 GCDHQ92947 438 aaPredicted RBP15.88■□□□□ 0.13
CLN6-213ENST00000636212 OR51V1Q9H2C8 321 aa15.88■□□□□ 0.13
CLN6-213ENST00000636212 MED20Q9H944 212 aa15.88■□□□□ 0.13
CLN6-213ENST00000636212 CLN8Q9UBY8 286 aa15.88■□□□□ 0.13
CLN6-213ENST00000636212 FSHBP01225 129 aa15.87■□□□□ 0.13
CLN6-213ENST00000636212 PMELP40967 661 aa15.87■□□□□ 0.13
CLN6-213ENST00000636212 GINS1Q14691 196 aa15.87■□□□□ 0.13
CLN6-213ENST00000636212 SNCBQ16143 134 aa15.87■□□□□ 0.13
CLN6-213ENST00000636212 RHOUQ7L0Q8 258 aa15.87■□□□□ 0.13
CLN6-213ENST00000636212 OR56B2PQ8NGI1 322 aa15.87■□□□□ 0.13
CLN6-213ENST00000636212 OR52H1Q8NGJ2 320 aa15.87■□□□□ 0.13
CLN6-213ENST00000636212 C22orf15Q8WYQ4 148 aa15.87■□□□□ 0.13
CLN6-213ENST00000636212 MMADHCQ9H3L0 296 aaPredicted RBP15.87■□□□□ 0.13
CLN6-213ENST00000636212 A6NLC8 198 aa15.86■□□□□ 0.13
CLN6-213ENST00000636212 PHYHO14832 338 aa15.86■□□□□ 0.13
CLN6-213ENST00000636212 H2BFMP0C1H6 154 aa15.86■□□□□ 0.13
CLN6-213ENST00000636212 PSKH1P11801 424 aa15.86■□□□□ 0.13
CLN6-213ENST00000636212 OSMP13725 252 aa15.86■□□□□ 0.13
CLN6-213ENST00000636212 CBX1P83916 185 aa15.86■□□□□ 0.13
CLN6-213ENST00000636212 OR8B8Q15620 311 aa15.86■□□□□ 0.13
CLN6-213ENST00000636212 FAM201AQ5SY85 155 aa15.86■□□□□ 0.13
CLN6-213ENST00000636212 LINC01590Q5TEZ4 76 aa15.86■□□□□ 0.13
CLN6-213ENST00000636212 FTMTQ8N4E7 242 aa15.86■□□□□ 0.13
CLN6-213ENST00000636212 BOLLQ8N9W6 283 aaKnown RBP15.86■□□□□ 0.13
CLN6-213ENST00000636212 OR8S1Q8NH09 359 aa15.86■□□□□ 0.13
CLN6-213ENST00000636212 RNF133Q8WVZ7 376 aa15.86■□□□□ 0.13
CLN6-213ENST00000636212 RAB40AQ8WXH6 277 aa15.86■□□□□ 0.13
CLN6-213ENST00000636212 ABHD6Q9BV23 337 aa15.86■□□□□ 0.13
CLN6-213ENST00000636212 MS4A7Q9GZW8 240 aaPredicted RBP15.86■□□□□ 0.13
CLN6-213ENST00000636212 OR10A2Q9H208 303 aa15.86■□□□□ 0.13
CLN6-213ENST00000636212 ERVK-18Q9QC07 812 aa15.86■□□□□ 0.13
CLN6-213ENST00000636212 DNAJB9Q9UBS3 223 aa15.86■□□□□ 0.13
CLN6-213ENST00000636212 IGHV2-70DA0A0C4DH43 119 aa15.85■□□□□ 0.13
CLN6-213ENST00000636212 hCG_1807616A0A1W2PRN6 198 aa15.85■□□□□ 0.13
CLN6-213ENST00000636212 NDUFA2O43678 99 aa15.85■□□□□ 0.13
CLN6-213ENST00000636212 DNAJC8O75937 253 aaPredicted RBP15.85■□□□□ 0.13
CLN6-213ENST00000636212 GRPP07492 148 aa15.85■□□□□ 0.13
CLN6-213ENST00000636212 PPIAL4GP0DN37 164 aa15.85■□□□□ 0.13
CLN6-213ENST00000636212 GNALP38405 381 aa15.85■□□□□ 0.13
CLN6-213ENST00000636212 NPY4RP50391 375 aa15.85■□□□□ 0.13
CLN6-213ENST00000636212 RPS7P62081 194 aaKnown RBP15.85■□□□□ 0.13
CLN6-213ENST00000636212 PAX8Q06710 450 aa15.85■□□□□ 0.13
CLN6-213ENST00000636212 MPPED2Q15777 294 aa15.85■□□□□ 0.13
CLN6-213ENST00000636212 KLHL12Q53G59 568 aa15.85■□□□□ 0.13
CLN6-213ENST00000636212 PLBD1Q6P4A8 553 aa15.85■□□□□ 0.13
CLN6-213ENST00000636212 FAM57BQ71RH2 274 aa15.85■□□□□ 0.13
CLN6-213ENST00000636212 ZNF454Q8N9F8 522 aa15.85■□□□□ 0.13
CLN6-213ENST00000636212 THEM6Q8WUY1 208 aa15.85■□□□□ 0.13
CLN6-213ENST00000636212 SPSB4Q96A44 273 aa15.85■□□□□ 0.13
CLN6-213ENST00000636212 REEP6Q96HR9 211 aa15.85■□□□□ 0.13
CLN6-213ENST00000636212 PGAM5Q96HS1 289 aa15.85■□□□□ 0.13
CLN6-213ENST00000636212 TECTBQ96PL2 329 aa15.85■□□□□ 0.13
CLN6-213ENST00000636212 MARCH7Q9H992 704 aa15.85■□□□□ 0.13
CLN6-213ENST00000636212 C1orf123Q9NWV4 160 aa15.85■□□□□ 0.13
CLN6-213ENST00000636212 DNAJC27Q9NZQ0 273 aa15.85■□□□□ 0.13
CLN6-213ENST00000636212 KIF17Q9P2E2 1029 aa15.85■□□□□ 0.13
CLN6-213ENST00000636212 TRAV38-1A0A0B4J264 116 aa15.84■□□□□ 0.13
CLN6-213ENST00000636212 LGALS8O00214 317 aa15.84■□□□□ 0.13
CLN6-213ENST00000636212 PRODHO43272 600 aa15.84■□□□□ 0.13
CLN6-213ENST00000636212 FKBP6O75344 327 aa15.84■□□□□ 0.13
CLN6-213ENST00000636212 LYNP07948 512 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms