RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 TUSC5Q8IXB3 177 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 UBE2J2Q8N2K1 259 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 SLC37A3Q8NCC5 494 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 OR6K3Q8NGY3 331 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 OR4C3Q8NH37 302 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 OR2V1Q8NHB1 315 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 SLC7A6Q92536 515 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 CNOT9Q92600 299 aaKnown RBP4.21□□□□□ -1.73
LINC00550-201ENST00000629293 AJUBAQ96IF1 538 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 GMPPAQ96IJ6 420 aaPredicted RBP4.21□□□□□ -1.73
LINC00550-201ENST00000629293 SNX18Q96RF0 628 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 KLHDC3Q9BQ90 382 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 HDHD5Q9BXW7 423 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 MMP28Q9H239 520 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 RERGLQ9H628 205 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 NGBQ9NPG2 151 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 MRTO4Q9UKD2 239 aaKnown RBP4.21□□□□□ -1.73
LINC00550-201ENST00000629293 MED31Q9Y3C7 131 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF175Q9Y473 711 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 N6AMT1Q9Y5N5 214 aa4.21□□□□□ -1.73
LINC00550-201ENST00000629293 A0A0J9YW62 118 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 A0A1B0GWA3 101 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 ABCD4O14678 606 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 SHC1P29353 583 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 C17orf67Q0P5P2 114 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 RAB35Q15286 201 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 ZNF141Q15928 474 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 PYDC2Q56P42 97 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 LCN1P1Q5VSP4 162 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 B3GLCTQ6Y288 498 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 DUSP18Q8NEJ0 188 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 OR52N5Q8NH56 324 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 ACOT12Q8WYK0 555 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 RADILQ96JH8 1075 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 PGLYRP3Q96LB9 341 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 TEAD3Q99594 435 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 TMEM43Q9BTV4 400 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 CACNG6Q9BXT2 260 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 MS4A7Q9GZW8 240 aaPredicted RBP4.21□□□□□ -1.74
LINC00550-201ENST00000629293 PPIL3Q9H2H8 161 aaKnown RBP4.21□□□□□ -1.74
LINC00550-201ENST00000629293 KCNN2Q9H2S1 579 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 ZNF701Q9NV72 531 aaPredicted RBP4.21□□□□□ -1.74
LINC00550-201ENST00000629293 COMMD3Q9UBI1 195 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 ICAM5Q9UMF0 924 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 NOTCH3Q9UM47 2321 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 CIB4A0PJX0 185 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 PRR23D1E9PI22 279 aaPredicted RBP4.21□□□□□ -1.74
LINC00550-201ENST00000629293 E9PI62 339 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 FADS1O60427 444 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 SBK2P0C263 348 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 PRR23D2P0DMB1 279 aaPredicted RBP4.21□□□□□ -1.74
LINC00550-201ENST00000629293 PAICSP22234 425 aaKnown RBP4.21□□□□□ -1.74
LINC00550-201ENST00000629293 HLA-DMAP28067 261 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 LOXP28300 417 aaPredicted RBP4.21□□□□□ -1.74
LINC00550-201ENST00000629293 CAPZA2P47755 286 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 CRMP1Q14194 572 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 GGTLC2Q14390 218 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 FGFBP1Q14512 234 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 TRAM1Q15629 374 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 NDUFAF6Q330K2 333 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 PLA1AQ53H76 456 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 DMKNQ6E0U4 476 aaPredicted RBP4.21□□□□□ -1.74
LINC00550-201ENST00000629293 TMEM81Q6P7N7 255 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 CLEC2AQ6UVW9 174 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 GGNQ86UU5 652 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 ZNF525Q8N782 197 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 FADS6Q8N9I5 356 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 STEAP2Q8NFT2 490 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 NTNG2Q96CW9 530 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 MUCL1Q96DR8 90 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 RNF121Q9H920 327 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 TRIM36Q9NQ86 728 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 RBFOX1Q9NWB1 397 aaKnown RBP4.21□□□□□ -1.74
LINC00550-201ENST00000629293 CHRNA9Q9UGM1 479 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 EXPH5Q8NEV8 1989 aa4.21□□□□□ -1.74
LINC00550-201ENST00000629293 TRAV27A0A087WT01 109 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 RIIAD1A6NNX1 92 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 RAD51DO75771 328 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 PPP1R3DO95685 299 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 SLC2A2P11168 524 aaPredicted RBP4.2□□□□□ -1.74
LINC00550-201ENST00000629293 PPP3CBP16298 524 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 MYL9P24844 172 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 AGTR1P30556 359 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 ZNF83P51522 516 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 TAS2R43P59537 309 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 ACTC1P68032 377 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 ACTA1P68133 377 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 ZSWIM7Q19AV6 140 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 TBRG1Q3YBR2 411 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 GAGE13Q4V321 117 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 PDSS1Q5T2R2 415 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 ZNF100Q8IYN0 542 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 Q8N402 240 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 OR5W2Q8NH69 310 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 KLHL15Q96M94 604 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 IFT27Q9BW83 186 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 TRIM2Q9C040 744 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 SHARPINQ9H0F6 387 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 TMEM27Q9HBJ8 222 aa4.2□□□□□ -1.74
LINC00550-201ENST00000629293 CYSLTR2Q9NS75 346 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms