RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 HOXA3O43365 443 aaPredicted RBP11.21□□□□□ -0.61
SOX2-OT-241ENST00000626948 LHBP01229 141 aa11.21□□□□□ -0.61
SOX2-OT-241ENST00000626948 SPI1P17947 270 aa11.21□□□□□ -0.61
SOX2-OT-241ENST00000626948 MDKP21741 143 aaPredicted RBP11.21□□□□□ -0.61
SOX2-OT-241ENST00000626948 OMGP23515 440 aa11.21□□□□□ -0.61
SOX2-OT-241ENST00000626948 RELBQ01201 579 aa11.21□□□□□ -0.61
SOX2-OT-241ENST00000626948 SRSF4Q08170 494 aaKnown RBP11.21□□□□□ -0.61
SOX2-OT-241ENST00000626948 MALLQ13021 153 aa11.21□□□□□ -0.61
SOX2-OT-241ENST00000626948 BTNL3Q6UXE8 466 aa11.21□□□□□ -0.61
SOX2-OT-241ENST00000626948 RBMS3Q6XE24 437 aaKnown RBP11.21□□□□□ -0.61
SOX2-OT-241ENST00000626948 CPLX4Q7Z7G2 160 aa11.21□□□□□ -0.61
SOX2-OT-241ENST00000626948 FAM90A1Q86YD7 464 aa11.21□□□□□ -0.61
SOX2-OT-241ENST00000626948 C1orf87Q8N0U7 546 aa11.21□□□□□ -0.61
SOX2-OT-241ENST00000626948 AQP11Q8NBQ7 271 aa11.21□□□□□ -0.61
SOX2-OT-241ENST00000626948 SPRYD4Q8WW59 207 aaPredicted RBP11.21□□□□□ -0.61
SOX2-OT-241ENST00000626948 ERGIC1Q969X5 290 aa11.21□□□□□ -0.61
SOX2-OT-241ENST00000626948 SPSB4Q96A44 273 aa11.21□□□□□ -0.61
SOX2-OT-241ENST00000626948 SEH1LQ96EE3 360 aa11.21□□□□□ -0.61
SOX2-OT-241ENST00000626948 ADAT1Q9BUB4 502 aaKnown RBP11.21□□□□□ -0.61
SOX2-OT-241ENST00000626948 TSSK6Q9BXA6 273 aa11.21□□□□□ -0.61
SOX2-OT-241ENST00000626948 MED20Q9H944 212 aa11.21□□□□□ -0.61
SOX2-OT-241ENST00000626948 RNF7Q9UBF6 113 aa11.21□□□□□ -0.61
SOX2-OT-241ENST00000626948 U3KQV3 271 aa11.21□□□□□ -0.61
SOX2-OT-241ENST00000626948 PRKDCP78527 4128 aaKnown RBP11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 CENPVL3A0A0U1RRI6 287 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 DHRS12A0PJE2 317 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 LGALS8O00214 317 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 ZNF593O00488 134 aaPredicted RBP11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 ATP8B1O43520 1251 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 KRT36O76013 467 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 SPARCP09486 303 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 T-ENOLP0DO92 83 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 ZNF823P16415 610 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 AMY2BP19961 511 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 CFHR2P36980 270 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 IFNGR2P38484 337 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 ENTPD1P49961 510 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 FAM3AP98173 230 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 TEX30Q5JUR7 227 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 SHISA2Q6UWI4 295 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 DRAM2Q6UX65 266 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 SPATC1Q76KD6 591 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 TMEM179BQ7Z7N9 219 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 BOLLQ8N9W6 283 aaKnown RBP11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 OR2T4Q8NH00 348 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 SPTSSAQ969W0 71 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 SGK3Q96BR1 496 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 PLEKHA8Q96JA3 519 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 KCNJ15Q99712 375 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 NIPSNAP1Q9BPW8 284 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 FGF23Q9GZV9 251 aaPredicted RBP11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 SIRPDQ9H106 197 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 ZNF696Q9H7X3 374 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 C1orf123Q9NWV4 160 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 MRPL15Q9P015 296 aaKnown RBP11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 ARL2BPQ9Y2Y0 163 aa11.2□□□□□ -0.62
SOX2-OT-241ENST00000626948 IGHV3OR15-7A0A075B7D8 119 aa11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 FAM183AA6NL82 134 aa11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 GMDSO60547 372 aa11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 CCNB2O95067 398 aa11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 GYPAP02724 150 aa11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 SLC25A1P53007 311 aa11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 KRTAP10-3P60369 221 aa11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 GNGT1P63211 74 aa11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 MICAQ29983 383 aa11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 LCN8Q6JVE9 175 aa11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 RPL13AP3Q6NVV1 102 aa11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 C16orf87Q6PH81 154 aa11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 C16orf89Q6UX73 402 aa11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 NLRC3Q7RTR2 1065 aa11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 SLC16A9Q7RTY1 509 aa11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 IQCF1Q8N6M8 205 aa11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 OR52L1Q8NGH7 329 aa11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 OR11L1Q8NGX0 322 aa11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 SLC25A28Q96A46 364 aa11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 COPS4Q9BT78 406 aa11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 DGCR6LQ9BY27 220 aa11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 MARCH7Q9H992 704 aa11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 ZMAT3Q9HA38 289 aaKnown RBP11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 FN3KRPQ9HA64 309 aa11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 CENPMQ9NSP4 180 aa11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 TBC1D23Q9NUY8 699 aa11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 N6AMT1Q9Y5N5 214 aa11.19□□□□□ -0.62
SOX2-OT-241ENST00000626948 hCG_38984A0A1B0GV85 526 aa11.18□□□□□ -0.62
SOX2-OT-241ENST00000626948 OOEPA6NGQ2 149 aa11.18□□□□□ -0.62
SOX2-OT-241ENST00000626948 GGT3PA6NGU5 568 aa11.18□□□□□ -0.62
SOX2-OT-241ENST00000626948 ZNF879B4DU55 563 aa11.18□□□□□ -0.62
SOX2-OT-241ENST00000626948 ADAM20O43506 726 aa11.18□□□□□ -0.62
SOX2-OT-241ENST00000626948 GRPP07492 148 aa11.18□□□□□ -0.62
SOX2-OT-241ENST00000626948 IRF2P14316 349 aa11.18□□□□□ -0.62
SOX2-OT-241ENST00000626948 FMO3P31513 532 aa11.18□□□□□ -0.62
SOX2-OT-241ENST00000626948 MTNR1AP48039 350 aa11.18□□□□□ -0.62
SOX2-OT-241ENST00000626948 CSNK2BP67870 215 aa11.18□□□□□ -0.62
SOX2-OT-241ENST00000626948 SPATS1Q496A3 300 aa11.18□□□□□ -0.62
SOX2-OT-241ENST00000626948 TEX36Q5VZQ5 186 aa11.18□□□□□ -0.62
SOX2-OT-241ENST00000626948 Q6YL49 198 aa11.18□□□□□ -0.62
SOX2-OT-241ENST00000626948 DPY19L4Q7Z388 723 aa11.18□□□□□ -0.62
SOX2-OT-241ENST00000626948 PLPP7Q8NBV4 271 aa11.18□□□□□ -0.62
SOX2-OT-241ENST00000626948 TMIGD2Q96BF3 282 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms