RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	NUP50	Q9UKX7	468 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	RIF1	Q5UIP0	2472 aa	Known RBP	4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	ZNF462	Q96JM2	2506 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322		E7EQL1	145 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	RTCA	O00442	366 aa	Known RBP	4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	EIF3G	O75821	320 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	BCHE	P06276	602 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	CST2	P09228	141 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	RAB3B	P20337	219 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	OMP	P47874	163 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	IL13RA1	P78552	427 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	TIGD6	Q17RP2	521 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	TRMT12	Q53H54	448 aa	Known RBP	4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	SYT14P1	Q58G82	188 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	APOOL	Q6UXV4	268 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	CREB3L2	Q70SY1	520 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	ADCK2	Q7Z695	626 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	TMEM200A	Q86VY9	491 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	RBM45	Q8IUH3	476 aa	Known RBP	4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	FBXL14	Q8N1E6	418 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	GPR137C	Q8N3F9	429 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	NANOGP1	Q8N7R0	232 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	ZNF610	Q8N9Z0	462 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	LRRC75A	Q8NAA5	344 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	SLC37A3	Q8NCC5	494 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	OTULIN	Q96BN8	352 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	HS6ST2	Q96MM7	605 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	MICU1	Q9BPX6	476 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	CNPPD1	Q9BV87	410 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	SLC22A4	Q9H015	551 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	SLC38A1	Q9H2H9	487 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	OR51I1	Q9H343	314 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	RIMS4	Q9H426	269 aa	Predicted RBP	4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	FGF20	Q9NP95	211 aa	Predicted RBP	4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	SLCO1C1	Q9NYB5	712 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	P2RX2	Q9UBL9	471 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	ZNF391	Q9UJN7	358 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	ALG5	Q9Y673	324 aa		4.63	□□□□□ -1.67
CBWD3-215	ENST00000619322	CXorf65	A6NEN9	183 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	VSTM5	A8MXK1	200 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	NPIPA2	E9PIF3	369 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	NPIPA3	F8WFD2	350 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	CDRT1	O95170	752 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	BRI3	O95415	125 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	MPC2	O95563	127 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	ACSM4	P0C7M7	580 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	CXCL3	P19876	107 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	CHI3L1	P36222	383 aa	Predicted RBP	4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	CARD18	P57730	90 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	SNRPE	P62304	92 aa	Known RBP	4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	FAM189A2	Q15884	450 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	SYPL1	Q16563	259 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	DUSP5	Q16690	384 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322		Q3ZCU0	254 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	SPANXN2	Q5MJ10	180 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	ATPAF1	Q5TC12	328 aa	Predicted RBP	4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	VWA1	Q6PCB0	445 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	SYT8	Q8NBV8	401 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	OR9A2	Q8NGT5	310 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	RDH5	Q92781	318 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	DVL3	Q92997	716 aa	Predicted RBP	4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322		Q96MF0	132 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	MNT	Q99583	582 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	SPATA5L1	Q9BVQ7	753 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	PRO1933	Q9H354	126 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	SLA2	Q9H6Q3	261 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	BAIAP2	Q9UQB8	552 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	OR10H1	Q9Y4A9	318 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	TRAV36DV7	A0A075B6V5	113 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322		A0A087WUJ7	227 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322		A0A0B4J2E0	115 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322		A0A1B0GX12	115 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322		A0A1W2PS29	197 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	FAM166B	A8MTA8	275 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	NDUFA2	O43678	99 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	SH3BGRL	O75368	114 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	NCR1	O76036	304 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	ERCC1	P07992	297 aa	Predicted RBP	4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	CPE	P16870	476 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	PI3	P19957	117 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	CD200	P41217	278 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	MEOX2	P50222	304 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	UGT2B15	P54855	530 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	ERVFRD-1	P60508	538 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	MRPS34	P82930	218 aa	Known RBP	4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	PAX8	Q06710	450 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	ST3GAL4	Q11206	333 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	GPR50	Q13585	617 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	FHL1	Q13642	323 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	SLC27A4	Q6P1M0	643 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	GDPGP1	Q6ZNW5	385 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	BTN2A1	Q7KYR7	527 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	WFDC11	Q8NEX6	87 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	OR9K2	Q8NGE7	335 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	PHOSPHO1	Q8TCT1	267 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	UPRT	Q96BW1	309 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	OR5M11	Q96RB7	305 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	SOST	Q9BQB4	213 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	MED18	Q9BUE0	208 aa		4.62	□□□□□ -1.67
CBWD3-215	ENST00000619322	BARHL1	Q9BZE3	327 aa		4.62	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms