RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 MSI2Q96DH6 328 aaKnown RBP6.97□□□□□ -1.29
NEK3-209ENST00000618856 MEGF10Q96KG7 1140 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 OR2V2Q96R30 315 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 SLC22A4Q9H015 551 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 GCM1Q9NP62 436 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 C8orf4Q9NR00 106 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 TMEM100Q9NV29 134 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 FAM206AQ9NX38 181 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 ZNF391Q9UJN7 358 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 LAMP5Q9UJQ1 280 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 C2CD3Q4AC94 2353 aa6.97□□□□□ -1.29
NEK3-209ENST00000618856 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.96□□□□□ -1.29
NEK3-209ENST00000618856 SONP18583 2426 aaKnown RBP6.96□□□□□ -1.3
NEK3-209ENST00000618856 A0A0U1RQV5 110 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 LRP5LA4QPB2 252 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 IFNL4K9M1U5 179 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 CDC14BO60729 498 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 ENTPD6O75354 484 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 IGHV2-70P01814 119 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 MRPL3P09001 348 aaKnown RBP6.96□□□□□ -1.3
NEK3-209ENST00000618856 OR2T7P0C7T2 308 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 ANPEPP15144 967 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 TNFSF4P23510 183 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 CFL1P23528 166 aaKnown RBP6.96□□□□□ -1.3
NEK3-209ENST00000618856 HSD11B1P28845 292 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 SLC6A9P48067 706 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 CDH15P55291 814 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 RPS7P62081 194 aaKnown RBP6.96□□□□□ -1.3
NEK3-209ENST00000618856 SLC3A1Q07837 685 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 POU4F2Q12837 409 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 TAF13Q15543 124 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 KRTAP21-3Q3LHN1 58 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 MEDAGQ5VYS4 303 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 CYB5R2Q6BCY4 276 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 LRRN1Q6UXK5 716 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 SPATC1Q76KD6 591 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 MRPL21Q7Z2W9 205 aaKnown RBP6.96□□□□□ -1.3
NEK3-209ENST00000618856 SLC35F2Q8IXU6 374 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 ENTHD1Q8IYW4 607 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 OR5AS1Q8N127 324 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 PACRGLQ8N7B6 248 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 OR2T27Q8NH04 317 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 CLDND2Q8NHS1 167 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 RHOXF1Q8NHV9 184 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 ITLN1Q8WWA0 313 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 RFKQ969G6 155 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 ERGIC1Q969X5 290 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 POM121Q96HA1 1249 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 LYZL4Q96KX0 146 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 MROQ9BYG7 248 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 TMEM106BQ9NUM4 274 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 MRPS18AQ9NVS2 196 aaKnown RBP6.96□□□□□ -1.3
NEK3-209ENST00000618856 FAM118AQ9NWS6 357 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 DCAF16Q9NXF7 216 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 MRM2Q9UI43 246 aaKnown RBP6.96□□□□□ -1.3
NEK3-209ENST00000618856 EXOGQ9Y2C4 368 aaKnown RBP6.96□□□□□ -1.3
NEK3-209ENST00000618856 WIPI2Q9Y4P8 454 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 ORC6Q9Y5N6 252 aa6.96□□□□□ -1.3
NEK3-209ENST00000618856 LOC100289279A0A1B0GTE1 492 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 LOC100130705A0A1B0GUX0 176 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 CLDN25C9JDP6 229 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 INAFM1C9JVW0 142 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 F5H5P2 479 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 TMEM178BH3BS89 294 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 PPIHO43447 177 aaKnown RBP6.95□□□□□ -1.3
NEK3-209ENST00000618856 SULT1C4O75897 302 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 PNPP00491 289 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 CST4P01036 141 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 HLA-DPB1P04440 258 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 ANXA2P07355 339 aaKnown RBP6.95□□□□□ -1.3
NEK3-209ENST00000618856 CPT2P23786 658 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 ACKR3P25106 362 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 PMELP40967 661 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 SRP9P49458 86 aaKnown RBP6.95□□□□□ -1.3
NEK3-209ENST00000618856 GSK3AP49840 483 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 PRSS12P56730 875 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 CARTPTQ16568 116 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 ZIK1Q3SY52 487 aaPredicted RBP6.95□□□□□ -1.3
NEK3-209ENST00000618856 TMEM155Q4W5P6 130 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 FAM76BQ5HYJ3 339 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 OGFRL1Q5TC84 451 aaPredicted RBP6.95□□□□□ -1.3
NEK3-209ENST00000618856 ZNF322Q6U7Q0 402 aaPredicted RBP6.95□□□□□ -1.3
NEK3-209ENST00000618856 Q71RC1 249 aaPredicted RBP6.95□□□□□ -1.3
NEK3-209ENST00000618856 FAM57BQ71RH2 274 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 SSX6Q7RTT6 188 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 KRT77Q7Z794 578 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 LRRC28Q86X40 367 aaPredicted RBP6.95□□□□□ -1.3
NEK3-209ENST00000618856 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.95□□□□□ -1.3
NEK3-209ENST00000618856 EGFL6Q8IUX8 553 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 SPERTQ8NA61 448 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 BHLHE23Q8NDY6 225 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 OR10AD1Q8NGE0 317 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 OR8B12Q8NGG6 310 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 OR56B2PQ8NGI1 322 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 OR51G2Q8NGK0 314 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 FAM81AQ8TBF8 368 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 APH1BQ8WW43 257 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 CCL17Q92583 94 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 RAB1CQ92928 201 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 STMN2Q93045 179 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms