RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 PRSS45Q7RTY3 260 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 NPEPL1Q8NDH3 523 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 ZNF286AQ9HBT8 521 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 DSPPQ9NZW4 1301 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 TRAV1-2A0A0B4J238 106 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 SDHBP21912 280 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 MESTQ5EB52 335 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 ZNF770Q6IQ21 691 aaPredicted RBP12.42□□□□□ -0.42
CIITA-213ENST00000618327 TMEM105Q8N8V8 129 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 AKR7LQ8NHP1 331 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 RNF128Q8TEB7 428 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 IL1F10Q8WWZ1 152 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 RNPS1Q15287 305 aaKnown RBP12.41□□□□□ -0.42
CIITA-213ENST00000618327 RBMS2Q15434 407 aaKnown RBP12.41□□□□□ -0.42
CIITA-213ENST00000618327 ACKR4Q9NPB9 350 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 KCNE5Q9UJ90 142 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 SRCAPQ6ZRS2 3230 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 TIAF1O95411 115 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 CRYBB2P43320 205 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 ZNF169Q14929 603 aaPredicted RBP12.41□□□□□ -0.42
CIITA-213ENST00000618327 FCN2Q15485 313 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 MEX3BQ6ZN04 569 aaKnown RBP12.41□□□□□ -0.42
CIITA-213ENST00000618327 ADIPOR1Q96A54 375 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 RNF170Q96K19 258 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 SPACA5Q96QH8 159 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 SAMD10Q9BYL1 202 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 BANF2Q9H503 90 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 IGHV1-45A0A0A0MS14 117 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 XRCC2O43543 280 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 MED6O75586 246 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 CELA2AP08217 269 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 HOXB5P09067 269 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 M6PRP20645 277 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 ACTBL2Q562R1 376 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 GPR155Q7Z3F1 870 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 CADM3Q8N126 398 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 OR1S1Q8NH92 325 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 KCNJ15Q99712 375 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 RBM38Q9H0Z9 239 aaKnown RBP12.41□□□□□ -0.42
CIITA-213ENST00000618327 DNAJC13O75165 2243 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 ASXL3Q9C0F0 2248 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 A8MXE2 369 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 ZFPL1O95159 310 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 MT-CO2P00403 227 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 BGLAPP02818 100 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 EVX1P49640 407 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 TAGLNQ01995 201 aaKnown RBP12.41□□□□□ -0.42
CIITA-213ENST00000618327 RAB31Q13636 194 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 IDO2Q6ZQW0 420 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 CCDC71Q8IV32 467 aaPredicted RBP12.41□□□□□ -0.42
CIITA-213ENST00000618327 SULF2Q8IWU5 870 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 REEP6Q96HR9 211 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 CNTNAP3Q9BZ76 1288 aa12.41□□□□□ -0.42
CIITA-213ENST00000618327 TCF20Q9UGU0 1960 aaKnown RBP12.41□□□□□ -0.42
CIITA-213ENST00000618327 A0A0B4J203 849 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 ANKRD34BA5PLL1 514 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 CD79BP40259 229 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 MAGEB1P43366 347 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 HIST2H3PS2Q5TEC6 136 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 STEAP1BQ6NZ63 245 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 OR4D6Q8NGJ1 314 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 OR6X1Q8NH79 312 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 FBXO7Q9Y3I1 522 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 HS3ST3B1Q9Y662 390 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 ZNF883P0CG24 379 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 EPXP11678 715 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 WDR38Q5JTN6 314 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 DEGS2Q6QHC5 323 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 SLC16A12Q6ZSM3 486 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 ASB10Q8WXI3 467 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 GCM1Q9NP62 436 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 GNG13Q9P2W3 67 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 RER1O15258 196 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 TK1P04183 234 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 LIFP15018 202 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 EPHA1P21709 976 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 RBM39Q14498 530 aaKnown RBP12.4□□□□□ -0.42
CIITA-213ENST00000618327 ETFDHQ16134 617 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 OR2A2Q6IF42 318 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 TMPRSS7Q7RTY8 843 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 MRPL41Q8IXM3 137 aaKnown RBP12.4□□□□□ -0.42
CIITA-213ENST00000618327 FLVCR1-AS1Q8TAF5 88 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 C4orf45Q96LM5 186 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 SPSB2Q99619 263 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 RAB9BQ9NP90 201 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 TP53TG5Q9Y2B4 290 aa12.4□□□□□ -0.42
CIITA-213ENST00000618327 TRIM64BA6NI03 449 aa12.4□□□□□ -0.43
CIITA-213ENST00000618327 GABARAPH6UMI1 98 aa12.4□□□□□ -0.43
CIITA-213ENST00000618327 PTP4A3O75365 173 aa12.4□□□□□ -0.43
CIITA-213ENST00000618327 NXPH2O95156 264 aa12.4□□□□□ -0.43
CIITA-213ENST00000618327 GNB3P16520 340 aa12.4□□□□□ -0.43
CIITA-213ENST00000618327 CDONQ4KMG0 1287 aa12.4□□□□□ -0.43
CIITA-213ENST00000618327 CLVS2Q5SYC1 327 aa12.4□□□□□ -0.43
CIITA-213ENST00000618327 FAM122BQ7Z309 247 aa12.4□□□□□ -0.43
CIITA-213ENST00000618327 OR5AS1Q8N127 324 aa12.4□□□□□ -0.43
CIITA-213ENST00000618327 SLC7A6Q92536 515 aa12.4□□□□□ -0.43
CIITA-213ENST00000618327 GPR179Q6PRD1 2367 aa12.4□□□□□ -0.43
CIITA-213ENST00000618327 HSPB6O14558 160 aa12.39□□□□□ -0.43
CIITA-213ENST00000618327 ALOX5APP20292 161 aa12.39□□□□□ -0.43
CIITA-213ENST00000618327 GALP22466 123 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms