RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 CRLF2Q9HC73 371 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 EMC3Q9P0I2 261 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 EIF3KQ9UBQ5 218 aaKnown RBP10.94□□□□□ -0.66
CIITA-212ENST00000618207 IL17BQ9UHF5 180 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 NAP1L6A6NFF2 107 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 DHHO43323 396 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 EIF1BO60739 113 aaKnown RBP10.93□□□□□ -0.66
CIITA-212ENST00000618207 CD63P08962 238 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 CELA3AP09093 270 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 GNB3P16520 340 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 DNASE1P24855 282 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 OR3A4PP47883 348 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 UNC119Q13432 240 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 HIST3H3Q16695 136 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 C17orf107Q6ZR85 190 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 HDDC2Q7Z4H3 204 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 PAQR4Q8N4S7 273 aaPredicted RBP10.93□□□□□ -0.66
CIITA-212ENST00000618207 PSMF1Q92530 271 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 HYLS1Q96M11 299 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 SIGLEC12Q96PQ1 595 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 SELENOIQ9C0D9 397 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 NIPAL2Q9H841 368 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 FAM166BA8MTA8 275 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 SHOXO15266 292 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 NDUFB6O95139 128 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 MPIG6BO95866 241 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 AMY2AP04746 511 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 AKAIN1P0CW23 69 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 VSIG10L2P0DP72 767 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 VSIG8P0DPA2 414 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 B4GALT1P15291 398 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 FAUP35544 74 aaKnown RBP10.93□□□□□ -0.66
CIITA-212ENST00000618207 SFRP5Q5T4F7 317 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 CDCP2Q5VXM1 449 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 OLFML2AQ68BL7 652 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 TMEM104Q8NE00 496 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 OR10D3Q8NH80 312 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 ABHD3Q8WU67 409 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 PCNPQ8WW12 178 aaKnown RBP10.93□□□□□ -0.66
CIITA-212ENST00000618207 USB1Q9BQ65 265 aaKnown RBP10.93□□□□□ -0.66
CIITA-212ENST00000618207 NELFAQ9H3P2 528 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 EXO5Q9H790 373 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 SLC23A1Q9UHI7 598 aa10.93□□□□□ -0.66
CIITA-212ENST00000618207 OTOGLQ3ZCN5 2332 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 CCDC187A0A096LP49 1063 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 LRRC3CA6NJW4 275 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 ZNF780AO75290 641 aaPredicted RBP10.92□□□□□ -0.66
CIITA-212ENST00000618207 RAB3DO95716 219 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 CSF1P09603 554 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 FAHP16930 419 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 CD96P40200 585 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 SPEM2Q0P670 501 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 ENDOGQ14249 297 aaKnown RBP10.92□□□□□ -0.66
CIITA-212ENST00000618207 ATP1A1-AS1Q5TC04 95 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 TMEM164Q5U3C3 297 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 GLIPR1L1Q6UWM5 242 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 GABRG1Q8N1C3 465 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 OR8H1Q8NGG4 311 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 OR10K1Q8NGX5 313 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 OR2AE1Q8NHA4 323 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 C15orf40Q8WUR7 153 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 SNAPC3Q92966 411 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 TMEM41AQ96HV5 264 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 ELL3Q9HB65 397 aaPredicted RBP10.92□□□□□ -0.66
CIITA-212ENST00000618207 DLL4Q9NR61 685 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 LAMA5O15230 3695 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 ZFHX4Q86UP3 3567 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 WIPF3A6NGB9 483 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 HPP00738 406 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 PLATP00750 562 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 SULT1A3P0DMM9 295 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 SULT1A4P0DMN0 295 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 ZNF17P17021 662 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 POU3F2P20265 443 aaPredicted RBP10.92□□□□□ -0.66
CIITA-212ENST00000618207 AVPR2P30518 371 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 SRD5A2P31213 254 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 HTR2BP41595 481 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 B3GALT5-AS1P59052 145 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 RBMS2Q15434 407 aaKnown RBP10.92□□□□□ -0.66
CIITA-212ENST00000618207 GLDNQ6ZMI3 551 aaPredicted RBP10.92□□□□□ -0.66
CIITA-212ENST00000618207 NLRC3Q7RTR2 1065 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 C9orf62Q8N4C0 152 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 SLC22A24Q8N4F4 322 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 NKAIN3Q8N8D7 197 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 CLEC1AQ8NC01 280 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 GPX8Q8TED1 209 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 FBXO17Q96EF6 278 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 BOD1L1Q8NFC6 3051 aa10.92□□□□□ -0.66
CIITA-212ENST00000618207 COL27A1Q8IZC6 1860 aaPredicted RBP10.91□□□□□ -0.66
CIITA-212ENST00000618207 METTL21EPA6NDL7 271 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 CREBL2O60519 120 aaPredicted RBP10.91□□□□□ -0.66
CIITA-212ENST00000618207 TMEM127O75204 238 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 CYB5AP00167 134 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 MT-CO3P00414 261 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 IGHEP01854 428 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 SERPINA7P05543 415 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 ZNF81P51508 661 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 SCAND1P57086 179 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 TNK1Q13470 666 aa10.91□□□□□ -0.66
CIITA-212ENST00000618207 CDNFQ49AH0 187 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms