RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 FAM210BQ96KR6 192 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 DCLRE1CQ96SD1 692 aaKnown RBP7.39□□□□□ -1.23
GPC6-202ENST00000617456 APOL4Q9BPW4 351 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 TMEM43Q9BTV4 400 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 METTL17Q9H7H0 456 aaPredicted RBP7.39□□□□□ -1.23
GPC6-202ENST00000617456 SLC35D1Q9NTN3 355 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 SLC25A37Q9NYZ2 338 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 CCDC167Q9P0B6 97 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 RPS6KB2Q9UBS0 482 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 DNAJB9Q9UBS3 223 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 WARS2Q9UGM6 360 aaKnown RBP7.39□□□□□ -1.23
GPC6-202ENST00000617456 MLXQ9UH92 298 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 MAGEL2Q9UJ55 1249 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 ALG5Q9Y673 324 aa7.39□□□□□ -1.23
GPC6-202ENST00000617456 A0A087WUJ7 227 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 E9PI62 339 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 TBX1O43435 398 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 SELENOFO60613 162 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 SLC43A1O75387 559 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 MT-ATP6P00846 226 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 IGF2P01344 180 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 IGKV3-15P01624 115 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 IGLV1-44P01699 117 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 CRYAAP02489 173 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 OR4A8P0C604 315 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 FOLR2P14207 255 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 ETV6P41212 452 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 SRP9P49458 86 aaKnown RBP7.38□□□□□ -1.23
GPC6-202ENST00000617456 UBE2NP61088 152 aaKnown RBP7.38□□□□□ -1.23
GPC6-202ENST00000617456 RBX1P62877 108 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 POU3F1Q03052 451 aaPredicted RBP7.38□□□□□ -1.23
GPC6-202ENST00000617456 DGUOKQ16854 277 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 COQ5Q5HYK3 327 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 ALG10BQ5I7T1 473 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 ZNF613Q6PF04 617 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 TEX261Q6UWH6 196 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 LINC00114Q6XXX2 140 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 PXKQ7Z7A4 578 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 HMGN2P46Q86SG4 172 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 RANBP3LQ86VV4 465 aaPredicted RBP7.38□□□□□ -1.23
GPC6-202ENST00000617456 TMEM17Q86X19 198 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 MSRB3Q8IXL7 192 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 NUP37Q8NFH4 326 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 OR2D3Q8NGH3 330 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 OR1K1Q8NGR3 316 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 SGMS2Q8NHU3 365 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 C22orf15Q8WYQ4 148 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 BCL2L2Q92843 193 aaPredicted RBP7.38□□□□□ -1.23
GPC6-202ENST00000617456 MAL2Q969L2 176 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 ZMYND19Q96E35 227 aaPredicted RBP7.38□□□□□ -1.23
GPC6-202ENST00000617456 SLC38A2Q96QD8 506 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 PARD6GQ9BYG4 376 aaPredicted RBP7.38□□□□□ -1.23
GPC6-202ENST00000617456 RIBC2Q9H4K1 309 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 TMEM27Q9HBJ8 222 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 VAPAQ9P0L0 249 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 LEF1Q9UJU2 399 aaPredicted RBP7.38□□□□□ -1.23
GPC6-202ENST00000617456 SLC13A4Q9UKG4 626 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 FBXL3Q9UKT7 428 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 U3KQ87 197 aa7.38□□□□□ -1.23
GPC6-202ENST00000617456 A0A0B4J2E0 115 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 A0A1B0GWA3 101 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 A0A1B0GX12 115 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 C5orf51A6NDU8 294 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 B9A039 149 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 SURF4O15260 269 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 SLC16A6O15403 523 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 HSPA12AO43301 675 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 LILRA1O75019 489 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 MITFO75030 526 aaPredicted RBP7.37□□□□□ -1.23
GPC6-202ENST00000617456 GATBO75879 557 aaKnown RBP7.37□□□□□ -1.23
GPC6-202ENST00000617456 LGI1O95970 557 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 IFNA7P01567 189 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 CRYGCP07315 174 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 ARSBP15848 533 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 PAICSP22234 425 aaKnown RBP7.37□□□□□ -1.23
GPC6-202ENST00000617456 ARR3P36575 388 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 CEBPGP53567 150 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 RAD23AP54725 363 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 CDH15P55291 814 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 PCBP3P57721 371 aaKnown RBP7.37□□□□□ -1.23
GPC6-202ENST00000617456 ERVK-25P63136 954 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 MRPS11P82912 194 aaKnown RBP7.37□□□□□ -1.23
GPC6-202ENST00000617456 EFNB3Q15768 340 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 HIKESHIQ53FT3 197 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 PAGE3Q5JUK9 113 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 THSD4Q6ZMP0 1018 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 DHFR2Q86XF0 187 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 SKA3Q8IX90 412 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 ZCCHC24Q8N2G6 241 aaKnown RBP7.37□□□□□ -1.23
GPC6-202ENST00000617456 ARRDC1Q8N5I2 433 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 C12orf45Q8N5I9 185 aaPredicted RBP7.37□□□□□ -1.23
GPC6-202ENST00000617456 GDPD1Q8N9F7 314 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 BEND2Q8NDZ0 799 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 SEMA6DQ8NFY4 1073 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 OR4K15Q8NH41 348 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 TAAR8Q969N4 342 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 KTI12Q96EK9 354 aaPredicted RBP7.37□□□□□ -1.23
GPC6-202ENST00000617456 RRNAD1Q96FB5 475 aaKnown RBP7.37□□□□□ -1.23
GPC6-202ENST00000617456 HYLS1Q96M11 299 aa7.37□□□□□ -1.23
GPC6-202ENST00000617456 EBF4Q9BQW3 602 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms