RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 IGHV3-9P01782 118 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 ATP1B3P54709 279 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 C17orf67Q0P5P2 114 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 MYBPHQ13203 477 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 KCTD9Q7L273 389 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 TEX19Q8NA77 164 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 HAVCR1Q96D42 359 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 PRMT8Q9NR22 394 aaPredicted RBP12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 KCNK7Q9Y2U2 307 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 SPTBN1Q01082 2364 aaKnown RBP12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 MGAQ8IWI9 3026 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 DMXL1Q9Y485 3027 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 PLPP3O14495 311 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 PPT1P50897 306 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 GLO1Q04760 184 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 IL10RAQ13651 578 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 TGIF1Q15583 401 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 JMJD6Q6NYC1 403 aaPredicted RBP12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 WDR74Q6RFH5 385 aaPredicted RBP12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 RHOUQ7L0Q8 258 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 YRDCQ86U90 279 aaKnown RBP12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 HOXB13Q92826 284 aaPredicted RBP12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 HRH4Q9H3N8 390 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 MIOXQ9UGB7 285 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 LRP4O75096 1905 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 EFNA2O43921 213 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 P04436 131 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 CAPZA1P52907 286 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 DCAF7P61962 342 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 RPS19BP1Q86WX3 136 aaKnown RBP12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 LRRC75AQ8NAA5 344 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 OR5D18Q8NGL1 313 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 SLC25A44Q96H78 314 aaPredicted RBP12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 NMNAT2Q9BZQ4 307 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 UCK1Q9HA47 277 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 TAS2R4Q9NYW5 299 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 VSX1Q9NZR4 365 aaPredicted RBP12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 MBD2Q9UBB5 411 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 C13orf42A0A1B0GVH6 325 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 SULT2B1O00204 365 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 STK17BO94768 372 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 AMY2AP04746 511 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 OR4E1P0C645 316 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 SPINK2P20155 84 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 GLT8D1Q68CQ7 371 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 SLC18B1Q6NT16 456 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 SYS1Q8N2H4 156 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 GPR148Q8TDV2 347 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 TMED6Q8WW62 240 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 FAM71F1Q96KD3 344 aaPredicted RBP12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 SOX7Q9BT81 388 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 OR2S2Q9NQN1 319 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 ZFP57Q9NU63 452 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 PILRBQ9UKJ0 227 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 DHDHQ9UQ10 334 aa12.88□□□□□ -0.35
SHROOM1-208ENST00000617339 A0A0B4J2A0 478 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 BLACEA4D250 179 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 ZNF814B7Z6K7 855 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 GLSO94925 669 aaPredicted RBP12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 H2BFMP0C1H6 154 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 GLYATL3Q5SZD4 288 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 NAA40Q86UY6 237 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 TMEM105Q8N8V8 129 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 CYYR1Q96J86 154 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 RSRP1Q9BUV0 290 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 RBM24Q9BX46 236 aaKnown RBP12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 PCED1AQ9H1Q7 454 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 ZNF275Q9NSD4 429 aaPredicted RBP12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 SHPKQ9UHJ6 478 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 EML6Q6ZMW3 1958 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 TMEM82A0PJX8 343 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 PQLC2LA1A4F0 135 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 CD34P28906 385 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 KIR3DL2P43630 455 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 RIDAP52758 137 aaKnown RBP12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 CLRN1P58418 232 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 SLC26A5P58743 744 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 HSF1Q00613 529 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 KLHL24Q6TFL4 600 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 OR13C3Q8NGS6 347 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 OTOSQ8NHW6 89 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 PPP1R1CQ8WVI7 109 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 CNTNAP3BQ96NU0 1288 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 RASL10BQ96S79 203 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 LRP12Q9Y561 859 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 EML5Q05BV3 1969 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 A0A0D9SG52 128 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 AKAIN1P0CW23 69 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 LY6G6FQ5SQ64 297 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 DND1Q8IYX4 353 aaKnown RBP12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 BATF2Q8N1L9 274 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 MIB2Q96AX9 1013 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 GPER1Q99527 375 aa12.87□□□□□ -0.35
SHROOM1-208ENST00000617339 F5H5K5 113 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 BCL2L11O43521 198 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 EIF4E2O60573 245 aaKnown RBP12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 RAB40ALP0C0E4 278 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 ZNF43P17038 809 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 CD163Q86VB7 1156 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 OR6S1Q8NH40 331 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms