RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 SULT2B1O00204 365 aa12.53□□□□□ -0.4
CHD1-212ENST00000614616 PRAMEF4O60810 478 aa12.53□□□□□ -0.4
CHD1-212ENST00000614616 SLC25A4P12235 298 aa12.53□□□□□ -0.4
CHD1-212ENST00000614616 BMP5P22003 454 aa12.53□□□□□ -0.4
CHD1-212ENST00000614616 UBE2NP61088 152 aaKnown RBP12.53□□□□□ -0.4
CHD1-212ENST00000614616 ERVS71-1P61550 626 aa12.53□□□□□ -0.4
CHD1-212ENST00000614616 ATP6V1FQ16864 119 aa12.53□□□□□ -0.4
CHD1-212ENST00000614616 ARHGEF39Q8N4T4 335 aa12.53□□□□□ -0.4
CHD1-212ENST00000614616 OR4S1Q8NGB4 309 aa12.53□□□□□ -0.4
CHD1-212ENST00000614616 OR5D18Q8NGL1 313 aa12.53□□□□□ -0.4
CHD1-212ENST00000614616 ATOH1Q92858 354 aaPredicted RBP12.53□□□□□ -0.4
CHD1-212ENST00000614616 LHX3Q9UBR4 397 aa12.53□□□□□ -0.4
CHD1-212ENST00000614616 EXOGQ9Y2C4 368 aaKnown RBP12.53□□□□□ -0.4
CHD1-212ENST00000614616 PRSS21Q9Y6M0 314 aa12.53□□□□□ -0.4
CHD1-212ENST00000614616 ADAMTSL3P82987 1691 aa12.53□□□□□ -0.4
CHD1-212ENST00000614616 UBE2L5PA0A1B0GUS4 154 aa12.53□□□□□ -0.4
CHD1-212ENST00000614616 HMGN4O00479 90 aa12.53□□□□□ -0.4
CHD1-212ENST00000614616 MBPP02686 304 aaPredicted RBP12.53□□□□□ -0.4
CHD1-212ENST00000614616 LIPNQ5VXI9 398 aa12.53□□□□□ -0.4
CHD1-212ENST00000614616 FIGLAQ6QHK4 219 aa12.53□□□□□ -0.4
CHD1-212ENST00000614616 CYHR1Q6ZMK1 362 aa12.53□□□□□ -0.4
CHD1-212ENST00000614616 PTOV1Q86YD1 416 aa12.53□□□□□ -0.4
CHD1-212ENST00000614616 RTN4IP1Q8WWV3 396 aaPredicted RBP12.53□□□□□ -0.4
CHD1-212ENST00000614616 CPEB1Q9BZB8 566 aaKnown RBP12.53□□□□□ -0.4
CHD1-212ENST00000614616 BANF2Q9H503 90 aa12.53□□□□□ -0.4
CHD1-212ENST00000614616 FIGNL2A6NMB9 653 aa12.52□□□□□ -0.4
CHD1-212ENST00000614616 GEMIN2O14893 280 aaKnown RBP12.52□□□□□ -0.4
CHD1-212ENST00000614616 P2RY12Q9H244 342 aa12.52□□□□□ -0.4
CHD1-212ENST00000614616 WASHC3Q9Y3C0 194 aa12.52□□□□□ -0.4
CHD1-212ENST00000614616 IGF2P01344 180 aa12.52□□□□□ -0.4
CHD1-212ENST00000614616 TMEM207Q6UWW9 146 aa12.52□□□□□ -0.4
CHD1-212ENST00000614616 ZFYVE21Q9BQ24 234 aa12.52□□□□□ -0.4
CHD1-212ENST00000614616 AMDHD2Q9Y303 409 aa12.52□□□□□ -0.4
CHD1-212ENST00000614616 RRP8O43159 456 aaKnown RBP12.52□□□□□ -0.41
CHD1-212ENST00000614616 CTNSO60931 367 aa12.52□□□□□ -0.41
CHD1-212ENST00000614616 CT45A10P0DMU9 189 aa12.52□□□□□ -0.41
CHD1-212ENST00000614616 CLN3Q13286 438 aa12.52□□□□□ -0.41
CHD1-212ENST00000614616 DCXRQ7Z4W1 244 aa12.52□□□□□ -0.41
CHD1-212ENST00000614616 ETFBKMTQ8IXQ9 262 aa12.52□□□□□ -0.41
CHD1-212ENST00000614616 CRYGNQ8WXF5 182 aa12.52□□□□□ -0.41
CHD1-212ENST00000614616 MPTX1A8MV57 137 aa12.52□□□□□ -0.41
CHD1-212ENST00000614616 OR2J2O76002 312 aa12.52□□□□□ -0.41
CHD1-212ENST00000614616 EXOSC7Q15024 291 aaKnown RBP12.52□□□□□ -0.41
CHD1-212ENST00000614616 APCDD1Q8J025 514 aa12.52□□□□□ -0.41
CHD1-212ENST00000614616 OIT3Q8WWZ8 545 aa12.52□□□□□ -0.41
CHD1-212ENST00000614616 SEMA6CQ9H3T2 930 aa12.52□□□□□ -0.41
CHD1-212ENST00000614616 OPN4Q9UHM6 478 aa12.52□□□□□ -0.41
CHD1-212ENST00000614616 NOSIPQ9Y314 301 aaKnown RBP12.52□□□□□ -0.41
CHD1-212ENST00000614616 SIGLEC5O15389 551 aa12.52□□□□□ -0.41
CHD1-212ENST00000614616 MT-ATP6P00846 226 aa12.52□□□□□ -0.41
CHD1-212ENST00000614616 FAM27D1Q5T7N8 215 aa12.52□□□□□ -0.41
CHD1-212ENST00000614616 C11orf42Q8N5U0 333 aa12.52□□□□□ -0.41
CHD1-212ENST00000614616 TP53RKQ96S44 253 aa12.52□□□□□ -0.41
CHD1-212ENST00000614616 TMPRSS13Q9BYE2 586 aa12.52□□□□□ -0.41
CHD1-212ENST00000614616 SLC5A6Q9Y289 635 aa12.52□□□□□ -0.41
CHD1-212ENST00000614616 GPM6AP51674 278 aa12.52□□□□□ -0.41
CHD1-212ENST00000614616 MMP21Q8N119 569 aa12.52□□□□□ -0.41
CHD1-212ENST00000614616 HSD17B8Q92506 261 aa12.52□□□□□ -0.41
CHD1-212ENST00000614616 PDXPQ96GD0 296 aa12.52□□□□□ -0.41
CHD1-212ENST00000614616 NTMQ9P121 344 aa12.52□□□□□ -0.41
CHD1-212ENST00000614616 PCDHGA9Q9Y5G4 932 aaKnown RBP12.52□□□□□ -0.41
CHD1-212ENST00000614616 STRCQ7RTU9 1775 aa12.52□□□□□ -0.41
CHD1-212ENST00000614616 IGLON5A6NGN9 336 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 SNCGO76070 127 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 SLC2A10O95528 541 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 PRSS54Q6PEW0 395 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 UBE3DQ7Z6J8 389 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 PDLIM7Q9NR12 457 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 PARP11Q9NR21 331 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 SSC5DA1L4H1 1573 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 ANKRD20A5PA0PJZ0 165 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 GPANK1O95872 356 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 CD79AP11912 226 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 KIR2DS3Q14952 304 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 NUBPLQ8TB37 319 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.51□□□□□ -0.41
CHD1-212ENST00000614616 H7C1C5 153 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 PGA3P0DJD8 388 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 TCTN2Q96GX1 697 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 STACQ99469 402 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 C11orf84Q9BUA3 381 aaPredicted RBP12.51□□□□□ -0.41
CHD1-212ENST00000614616 DRGXA6NNA5 263 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 GLB1P16278 677 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 CD96P40200 585 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 GABREP78334 506 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 Q1RN00 199 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 DMRTA1Q5VZB9 504 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 ZNF275Q9NSD4 429 aaPredicted RBP12.51□□□□□ -0.41
CHD1-212ENST00000614616 TRAV36DV7A0A075B6V5 113 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 GJB5O95377 273 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 AVPR2P30518 371 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 GNG4P50150 75 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 DPPA3Q6W0C5 159 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 OR8B4Q96RC9 309 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 TBX15Q96SF7 602 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 ABCA3Q99758 1704 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 PRRX2Q99811 253 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 OR5AC1P0C628 307 aa12.51□□□□□ -0.41
CHD1-212ENST00000614616 CNN1P51911 297 aaKnown RBP12.51□□□□□ -0.41
CHD1-212ENST00000614616 PHF19Q5T6S3 580 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms