RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 MSL2Q9HCI7 577 aa11.32□□□□□ -0.6
MDC1-209ENST00000613547 FGF20Q9NP95 211 aaPredicted RBP11.32□□□□□ -0.6
MDC1-209ENST00000613547 PLCXD1Q9NUJ7 323 aa11.32□□□□□ -0.6
MDC1-209ENST00000613547 ERVK13-1Q9NX77 482 aa11.32□□□□□ -0.6
MDC1-209ENST00000613547 SCN3BQ9NY72 215 aa11.32□□□□□ -0.6
MDC1-209ENST00000613547 CNOT2Q9NZN8 540 aaKnown RBP11.32□□□□□ -0.6
MDC1-209ENST00000613547 NUFIP1Q9UHK0 495 aaKnown RBP11.32□□□□□ -0.6
MDC1-209ENST00000613547 RAB26Q9ULW5 256 aa11.32□□□□□ -0.6
MDC1-209ENST00000613547 SNX5Q9Y5X3 404 aa11.32□□□□□ -0.6
MDC1-209ENST00000613547 A0A0U1RQV5 110 aa11.31□□□□□ -0.6
MDC1-209ENST00000613547 C5orf63A6NC05 138 aa11.31□□□□□ -0.6
MDC1-209ENST00000613547 ZSCAN5BA6NJL1 495 aa11.31□□□□□ -0.6
MDC1-209ENST00000613547 CD300LBA8K4G0 201 aa11.31□□□□□ -0.6
MDC1-209ENST00000613547 SPRY3O43610 288 aa11.31□□□□□ -0.6
MDC1-209ENST00000613547 ADH4P08319 380 aa11.31□□□□□ -0.6
MDC1-209ENST00000613547 CSF3P09919 207 aa11.31□□□□□ -0.6
MDC1-209ENST00000613547 PIPP12273 146 aaPredicted RBP11.31□□□□□ -0.6
MDC1-209ENST00000613547 MRPL28Q13084 256 aaKnown RBP11.31□□□□□ -0.6
MDC1-209ENST00000613547 ZNF684Q5T5D7 378 aa11.31□□□□□ -0.6
MDC1-209ENST00000613547 LHFPL3Q86UP9 236 aa11.31□□□□□ -0.6
MDC1-209ENST00000613547 ZCCHC24Q8N2G6 241 aaKnown RBP11.31□□□□□ -0.6
MDC1-209ENST00000613547 HAVCR2Q8TDQ0 301 aa11.31□□□□□ -0.6
MDC1-209ENST00000613547 TMEM80Q96HE8 168 aa11.31□□□□□ -0.6
MDC1-209ENST00000613547 SIGLEC11Q96RL6 698 aa11.31□□□□□ -0.6
MDC1-209ENST00000613547 ALG8Q9BVK2 526 aa11.31□□□□□ -0.6
MDC1-209ENST00000613547 ACOXLQ9NUZ1 547 aa11.31□□□□□ -0.6
MDC1-209ENST00000613547 TMEM100Q9NV29 134 aa11.31□□□□□ -0.6
MDC1-209ENST00000613547 OR52A1Q9UKL2 312 aa11.31□□□□□ -0.6
MDC1-209ENST00000613547 DIMT1Q9UNQ2 313 aaKnown RBP11.31□□□□□ -0.6
MDC1-209ENST00000613547 EXOSC1Q9Y3B2 195 aaKnown RBP11.31□□□□□ -0.6
MDC1-209ENST00000613547 CREBBPQ92793 2442 aa11.31□□□□□ -0.6
MDC1-209ENST00000613547 MYO9AB2RTY4 2548 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 USF3Q68DE3 2245 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 ANKRD30BLA7E2S9 258 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 J3QLW9 94 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 SRSF10O75494 262 aaKnown RBP11.3□□□□□ -0.6
MDC1-209ENST00000613547 MTRF1O75570 445 aaKnown RBP11.3□□□□□ -0.6
MDC1-209ENST00000613547 IGHV1-46P01743 117 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 DAOP14920 347 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 ATP6V1B1P15313 513 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 ZNF19P17023 458 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 GNALP38405 381 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 MAGEB1P43366 347 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 GSK3AP49840 483 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 PDLIM4P50479 330 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 PRSS12P56730 875 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 OR12D2P58182 307 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 CCL8P80075 99 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 TNFAIP6P98066 277 aaPredicted RBP11.3□□□□□ -0.6
MDC1-209ENST00000613547 FAM3AP98173 230 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 MFGE8Q08431 387 aaPredicted RBP11.3□□□□□ -0.6
MDC1-209ENST00000613547 CARTPTQ16568 116 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 TSTQ16762 297 aaKnown RBP11.3□□□□□ -0.6
MDC1-209ENST00000613547 CLEC12BQ2HXU8 276 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 TMEM255AQ5JRV8 349 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 C6orf141Q5SZD1 244 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 TMPRSS11AQ6ZMR5 421 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 ELMOD2Q8IZ81 293 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 STX19Q8N4C7 294 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 ZNF540Q8NDQ6 660 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 CSNK2A3Q8NEV1 391 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 OR2Z1Q8NG97 314 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 OR56B2PQ8NGI1 322 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 RDH5Q92781 318 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 ELMOD3Q96FG2 381 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 C4orf36Q96KX1 117 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 CNBD2Q96M20 576 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 SLC30A2Q9BRI3 323 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 RHNO1Q9BSD3 238 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 SAP30LQ9HAJ7 183 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 MRPL15Q9P015 296 aaKnown RBP11.3□□□□□ -0.6
MDC1-209ENST00000613547 ZNF319Q9P2F9 582 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 PSORS1C1Q9UIG5 152 aa11.3□□□□□ -0.6
MDC1-209ENST00000613547 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.29□□□□□ -0.6
MDC1-209ENST00000613547 hCG_38984A0A1B0GV85 526 aa11.29□□□□□ -0.6
MDC1-209ENST00000613547 NDUFS8O00217 210 aa11.29□□□□□ -0.6
MDC1-209ENST00000613547 XPNPEP2O43895 674 aa11.29□□□□□ -0.6
MDC1-209ENST00000613547 PNPP00491 289 aa11.29□□□□□ -0.6
MDC1-209ENST00000613547 CD55P08174 381 aa11.29□□□□□ -0.6
MDC1-209ENST00000613547 HTR1AP08908 422 aa11.29□□□□□ -0.6
MDC1-209ENST00000613547 TNFRSF1AP19438 455 aa11.29□□□□□ -0.6
MDC1-209ENST00000613547 ANOS1P23352 680 aa11.29□□□□□ -0.6
MDC1-209ENST00000613547 MAP2K3P46734 347 aa11.29□□□□□ -0.6
MDC1-209ENST00000613547 GBX2P52951 348 aaPredicted RBP11.29□□□□□ -0.6
MDC1-209ENST00000613547 MRPS11P82912 194 aaKnown RBP11.29□□□□□ -0.6
MDC1-209ENST00000613547 MZT1Q08AG7 82 aa11.29□□□□□ -0.6
MDC1-209ENST00000613547 ST3GAL4Q11206 333 aa11.29□□□□□ -0.6
MDC1-209ENST00000613547 TESK1Q15569 626 aa11.29□□□□□ -0.6
MDC1-209ENST00000613547 SPNS3Q6ZMD2 512 aa11.29□□□□□ -0.6
MDC1-209ENST00000613547 AHSA2Q719I0 299 aa11.29□□□□□ -0.6
MDC1-209ENST00000613547 CATSPERDQ86XM0 798 aa11.29□□□□□ -0.6
MDC1-209ENST00000613547 KLBQ86Z14 1044 aa11.29□□□□□ -0.6
MDC1-209ENST00000613547 KLHL36Q8N4N3 616 aa11.29□□□□□ -0.6
MDC1-209ENST00000613547 ZNF525Q8N782 197 aa11.29□□□□□ -0.6
MDC1-209ENST00000613547 OR51E1Q8TCB6 317 aa11.29□□□□□ -0.6
MDC1-209ENST00000613547 UBASH3BQ8TF42 649 aa11.29□□□□□ -0.6
MDC1-209ENST00000613547 FAM168AQ92567 244 aa11.29□□□□□ -0.6
MDC1-209ENST00000613547 GTF3AQ92664 365 aaKnown RBP11.29□□□□□ -0.6
MDC1-209ENST00000613547 RORBQ92753 470 aa11.29□□□□□ -0.6
MDC1-209ENST00000613547 GGHQ92820 318 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms