RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 KCNMB2Q9Y691 235 aa13.02□□□□□ -0.33
CDH1-213ENST00000612417 TRAV14DV4A0A0A6YYC5 116 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 WIPF3A6NGB9 483 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 DISC1C4P0D8 188 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 EFNA2O43921 213 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 TNFSF15O95150 251 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 LAP3P28838 519 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 MPGP29372 298 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 GSK3AP49840 483 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 ZNF41P51814 821 aaPredicted RBP13.01□□□□□ -0.33
CDH1-213ENST00000612417 DHRS2Q13268 280 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 UNC119Q13432 240 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 KLHL24Q6TFL4 600 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 ALKAL2Q6UX46 152 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 RHOUQ7L0Q8 258 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 OR1M1Q8NGA1 313 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 OR10S1Q8NGN2 331 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 OR5M8Q8NGP6 311 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 FGGYQ96C11 551 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 CCDC120Q96HB5 630 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 SLC6A7Q99884 636 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 GAL3ST1Q99999 423 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 PBOV1Q9GZY1 135 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 MOB1AQ9H8S9 216 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 ZMAT3Q9HA38 289 aaKnown RBP13.01□□□□□ -0.33
CDH1-213ENST00000612417 HRH3Q9Y5N1 445 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 SYT7O43581 403 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 S100A6P06703 90 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 AGTR1P30556 359 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 PTGDSP41222 190 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 SORDQ00796 357 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 FGL1Q08830 312 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 MYBPHQ13203 477 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 SSPNQ14714 243 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 ZNF660Q6AZW8 331 aaPredicted RBP13.01□□□□□ -0.33
CDH1-213ENST00000612417 PPP1R32Q7Z5V6 425 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 TMED4Q7Z7H5 227 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 ACBD4Q8NC06 268 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 OR1J2Q8NGS2 313 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 FAM46BQ96A09 425 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 ADAT3Q96EY9 351 aaPredicted RBP13.01□□□□□ -0.33
CDH1-213ENST00000612417 MFFQ9GZY8 342 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 SDHAF3Q9NRP4 125 aa13.01□□□□□ -0.33
CDH1-213ENST00000612417 H3BML4 177 aa13□□□□□ -0.33
CDH1-213ENST00000612417 EIF1AYO14602 144 aaKnown RBP13□□□□□ -0.33
CDH1-213ENST00000612417 TP53I11O14683 189 aa13□□□□□ -0.33
CDH1-213ENST00000612417 HLA-GP17693 338 aa13□□□□□ -0.33
CDH1-213ENST00000612417 DLSTP36957 453 aa13□□□□□ -0.33
CDH1-213ENST00000612417 P2RY4P51582 365 aa13□□□□□ -0.33
CDH1-213ENST00000612417 ZDHHC22Q8N966 263 aa13□□□□□ -0.33
CDH1-213ENST00000612417 STEAP2Q8NFT2 490 aa13□□□□□ -0.33
CDH1-213ENST00000612417 OR52N4Q8NGI2 321 aa13□□□□□ -0.33
CDH1-213ENST00000612417 OR5D14Q8NGL3 314 aa13□□□□□ -0.33
CDH1-213ENST00000612417 OR5M9Q8NGP3 310 aa13□□□□□ -0.33
CDH1-213ENST00000612417 EMC6Q9BV81 110 aa13□□□□□ -0.33
CDH1-213ENST00000612417 SPRY4Q9C004 299 aa13□□□□□ -0.33
CDH1-213ENST00000612417 MYEF2Q9P2K5 600 aaKnown RBP13□□□□□ -0.33
CDH1-213ENST00000612417 SLC5A6Q9Y289 635 aa13□□□□□ -0.33
CDH1-213ENST00000612417 SPAARA0A1B0GVQ0 90 aa13□□□□□ -0.33
CDH1-213ENST00000612417 TRIM77I1YAP6 450 aa13□□□□□ -0.33
CDH1-213ENST00000612417 SCO1O75880 301 aa13□□□□□ -0.33
CDH1-213ENST00000612417 PGA4P0DJD7 388 aa13□□□□□ -0.33
CDH1-213ENST00000612417 PGA3P0DJD8 388 aa13□□□□□ -0.33
CDH1-213ENST00000612417 TBPP20226 339 aa13□□□□□ -0.33
CDH1-213ENST00000612417 SSR4P51571 173 aa13□□□□□ -0.33
CDH1-213ENST00000612417 RNASE10Q5GAN6 216 aaKnown RBP13□□□□□ -0.33
CDH1-213ENST00000612417 SHEQ5VZ18 495 aa13□□□□□ -0.33
CDH1-213ENST00000612417 OPN5Q6U736 354 aa13□□□□□ -0.33
CDH1-213ENST00000612417 SLC25A42Q86VD7 318 aa13□□□□□ -0.33
CDH1-213ENST00000612417 FJX1Q86VR8 437 aa13□□□□□ -0.33
CDH1-213ENST00000612417 RPS19BP1Q86WX3 136 aaKnown RBP13□□□□□ -0.33
CDH1-213ENST00000612417 NOXO1Q8NFA2 376 aa13□□□□□ -0.33
CDH1-213ENST00000612417 POC1BQ8TC44 478 aa13□□□□□ -0.33
CDH1-213ENST00000612417 CXorf58Q96LI9 332 aa13□□□□□ -0.33
CDH1-213ENST00000612417 VSIG4Q9Y279 399 aa13□□□□□ -0.33
CDH1-213ENST00000612417 WIF1Q9Y5W5 379 aa13□□□□□ -0.33
CDH1-213ENST00000612417 LHFPL6Q9Y693 200 aa13□□□□□ -0.33
CDH1-213ENST00000612417 SESN1Q9Y6P5 492 aa13□□□□□ -0.33
CDH1-213ENST00000612417 A8MXK9 166 aa12.99□□□□□ -0.33
CDH1-213ENST00000612417 ZNF878C9JN71 531 aa12.99□□□□□ -0.33
CDH1-213ENST00000612417 IL2RAP01589 272 aa12.99□□□□□ -0.33
CDH1-213ENST00000612417 ERCC1P07992 297 aaPredicted RBP12.99□□□□□ -0.33
CDH1-213ENST00000612417 VSIG8P0DPA2 414 aa12.99□□□□□ -0.33
CDH1-213ENST00000612417 ICAM2P13598 275 aa12.99□□□□□ -0.33
CDH1-213ENST00000612417 RAB3AP20336 220 aa12.99□□□□□ -0.33
CDH1-213ENST00000612417 ZBTB25P24278 435 aa12.99□□□□□ -0.33
CDH1-213ENST00000612417 GNALP38405 381 aa12.99□□□□□ -0.33
CDH1-213ENST00000612417 ZNF345Q14585 488 aa12.99□□□□□ -0.33
CDH1-213ENST00000612417 C3orf33Q6P1S2 294 aa12.99□□□□□ -0.33
CDH1-213ENST00000612417 FAHD2BQ6P2I3 314 aaPredicted RBP12.99□□□□□ -0.33
CDH1-213ENST00000612417 FIP1L1Q6UN15 594 aaKnown RBP12.99□□□□□ -0.33
CDH1-213ENST00000612417 CFAP77Q6ZQR2 320 aa12.99□□□□□ -0.33
CDH1-213ENST00000612417 OVCH2Q7RTZ1 564 aa12.99□□□□□ -0.33
CDH1-213ENST00000612417 TRAPPC6BQ86SZ2 158 aa12.99□□□□□ -0.33
CDH1-213ENST00000612417 UEVLDQ8IX04 471 aa12.99□□□□□ -0.33
CDH1-213ENST00000612417 BEST3Q8N1M1 668 aa12.99□□□□□ -0.33
CDH1-213ENST00000612417 TMEM156Q8N614 296 aa12.99□□□□□ -0.33
CDH1-213ENST00000612417 OR4S1Q8NGB4 309 aa12.99□□□□□ -0.33
CDH1-213ENST00000612417 COQ8AQ8NI60 647 aa12.99□□□□□ -0.33
CDH1-213ENST00000612417 FAHD2AQ96GK7 314 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms