RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 NTN4Q9HB63 628 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 GCM1Q9NP62 436 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 BRD7Q9NPI1 651 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 TRIM36Q9NQ86 728 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 DNAJC27Q9NZQ0 273 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 ZNF391Q9UJN7 358 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 ANXA2P2A6NMY6 339 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 FAM157AC9JC47 383 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 F5H5P2 479 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 J3QLI3 93 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 SLC2A1P11166 492 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 CA6P23280 308 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 THBS2P35442 1172 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 MMP16P51512 607 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 ZNF92Q03936 586 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 ZNF181Q2M3W8 571 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 GFOD2Q3B7J2 385 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 GLYATL3Q5SZD4 288 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 IL17RELQ6ZVW7 336 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 FAM57BQ71RH2 274 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 ZNF771Q7L3S4 317 aaPredicted RBP10.41□□□□□ -0.74
CBWD3-208ENST00000612050 AMIGO2Q86SJ2 522 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 MOGAT3Q86VF5 341 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 PLPP7Q8NBV4 271 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 OR2AE1Q8NHA4 323 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 ASB17Q8WXJ9 295 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 LRTOMTQ8WZ04 291 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 TMEM158Q8WZ71 300 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 REEP6Q96HR9 211 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 CNN2Q99439 309 aaKnown RBP10.41□□□□□ -0.74
CBWD3-208ENST00000612050 MNTQ99583 582 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 ABCB9Q9NP78 766 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 TLN2Q9Y4G6 2542 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 FN1P02751 2386 aaKnown RBP10.41□□□□□ -0.74
CBWD3-208ENST00000612050 NIPBLQ6KC79 2804 aaeCLIP10.41□□□□□ -0.74
CBWD3-208ENST00000612050 PPIAL4EA0A075B759 164 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 A6NLC8 198 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 PPIAL4DF5H284 164 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 TMEM178BH3BS89 294 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 WNT9BO14905 357 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 MLNRO43193 412 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 SELENOFO60613 162 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 IGHV2-70P01814 119 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 HLA-DPB1P04440 258 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 PPIAL4FP0DN26 164 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 ATP6V1E1P36543 226 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 CD200P41217 278 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 ZNF121P58317 390 aaPredicted RBP10.41□□□□□ -0.74
CBWD3-208ENST00000612050 ZNF829Q3KNS6 432 aaPredicted RBP10.41□□□□□ -0.74
CBWD3-208ENST00000612050 NXNL2Q5VZ03 156 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 DEGS2Q6QHC5 323 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 LRRC28Q86X40 367 aaPredicted RBP10.41□□□□□ -0.74
CBWD3-208ENST00000612050 COMMD2Q86X83 199 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 OR56B2PQ8NGI1 322 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 FAM81AQ8TBF8 368 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 ITFG2Q969R8 447 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 TEAD3Q99594 435 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 SEMA6AQ9H2E6 1030 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 MIOXQ9UGB7 285 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 OR5V1Q9UGF6 321 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 IKZF2Q9UKS7 526 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 PPIAL4AQ9Y536 164 aa10.41□□□□□ -0.74
CBWD3-208ENST00000612050 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.4□□□□□ -0.74
CBWD3-208ENST00000612050 MALRD1Q5VYJ5 2156 aa10.4□□□□□ -0.74
CBWD3-208ENST00000612050 hCG_1807616A0A1W2PRN6 198 aa10.4□□□□□ -0.75
CBWD3-208ENST00000612050 H0YL77 283 aa10.4□□□□□ -0.75
CBWD3-208ENST00000612050 PLPP2O43688 288 aa10.4□□□□□ -0.75
CBWD3-208ENST00000612050 ZNF254O75437 659 aa10.4□□□□□ -0.75
CBWD3-208ENST00000612050 RPS2P15880 293 aaKnown RBP10.4□□□□□ -0.75
CBWD3-208ENST00000612050 OPRL1P41146 370 aa10.4□□□□□ -0.75
CBWD3-208ENST00000612050 GATA4P43694 442 aa10.4□□□□□ -0.75
CBWD3-208ENST00000612050 RIDAP52758 137 aaKnown RBP10.4□□□□□ -0.75
CBWD3-208ENST00000612050 PSMA6P60900 246 aaKnown RBP10.4□□□□□ -0.75
CBWD3-208ENST00000612050 CDC42P60953 191 aa10.4□□□□□ -0.75
CBWD3-208ENST00000612050 POU4F2Q12837 409 aa10.4□□□□□ -0.75
CBWD3-208ENST00000612050 SLX4IPQ5VYV7 408 aa10.4□□□□□ -0.75
CBWD3-208ENST00000612050 KDM4DQ6B0I6 523 aa10.4□□□□□ -0.75
CBWD3-208ENST00000612050 ASRGL1Q7L266 308 aa10.4□□□□□ -0.75
CBWD3-208ENST00000612050 RFLNBQ8N5W9 214 aa10.4□□□□□ -0.75
CBWD3-208ENST00000612050 TCEANCQ8N8B7 351 aa10.4□□□□□ -0.75
CBWD3-208ENST00000612050 OR8B3Q8NGG8 313 aa10.4□□□□□ -0.75
CBWD3-208ENST00000612050 ZNF420Q8TAQ5 688 aaPredicted RBP10.4□□□□□ -0.75
CBWD3-208ENST00000612050 TMEM163Q8TC26 289 aa10.4□□□□□ -0.75
CBWD3-208ENST00000612050 PYDC1Q8WXC3 89 aa10.4□□□□□ -0.75
CBWD3-208ENST00000612050 RFKQ969G6 155 aa10.4□□□□□ -0.75
CBWD3-208ENST00000612050 SPSB4Q96A44 273 aa10.4□□□□□ -0.75
CBWD3-208ENST00000612050 HIST1H2AAQ96QV6 131 aa10.4□□□□□ -0.75
CBWD3-208ENST00000612050 OR8B2Q96RD0 313 aa10.4□□□□□ -0.75
CBWD3-208ENST00000612050 MRI1Q9BV20 369 aa10.4□□□□□ -0.75
CBWD3-208ENST00000612050 RIBC2Q9H4K1 309 aa10.4□□□□□ -0.75
CBWD3-208ENST00000612050 PATZ1Q9HBE1 687 aaKnown RBP10.4□□□□□ -0.75
CBWD3-208ENST00000612050 IMPAD1Q9NX62 359 aa10.4□□□□□ -0.75
CBWD3-208ENST00000612050 OAZ3Q9UMX2 235 aa10.4□□□□□ -0.75
CBWD3-208ENST00000612050 LRCH1Q9Y2L9 728 aa10.4□□□□□ -0.75
CBWD3-208ENST00000612050 NF1P21359 2839 aa10.39□□□□□ -0.75
CBWD3-208ENST00000612050 ACOD1A6NK06 481 aa10.39□□□□□ -0.75
CBWD3-208ENST00000612050 SAC3D1A6NKF1 404 aa10.39□□□□□ -0.75
CBWD3-208ENST00000612050 SNTNA6NMZ2 147 aa10.39□□□□□ -0.75
CBWD3-208ENST00000612050 ZAR1LA6NP61 321 aa10.39□□□□□ -0.75
CBWD3-208ENST00000612050 RNF212BA8MTL3 300 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms