RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 LCATP04180 440 aa7.34□□□□□ -1.23
SNCA-212ENST00000611107 H2BFMP0C1H6 154 aa7.34□□□□□ -1.23
SNCA-212ENST00000611107 OR2T7P0C7T2 308 aa7.34□□□□□ -1.23
SNCA-212ENST00000611107 BMP4P12644 408 aa7.34□□□□□ -1.23
SNCA-212ENST00000611107 VHLP40337 213 aa7.34□□□□□ -1.23
SNCA-212ENST00000611107 SLC15A1P46059 708 aa7.34□□□□□ -1.23
SNCA-212ENST00000611107 LMO4P61968 165 aa7.34□□□□□ -1.23
SNCA-212ENST00000611107 TAF13Q15543 124 aa7.34□□□□□ -1.23
SNCA-212ENST00000611107 NKPD1Q17RQ9 610 aa7.34□□□□□ -1.23
SNCA-212ENST00000611107 GLYATL3Q5SZD4 288 aa7.34□□□□□ -1.23
SNCA-212ENST00000611107 ZNF684Q5T5D7 378 aa7.34□□□□□ -1.23
SNCA-212ENST00000611107 AVPI1Q5T686 147 aa7.34□□□□□ -1.23
SNCA-212ENST00000611107 CYB5R2Q6BCY4 276 aa7.34□□□□□ -1.23
SNCA-212ENST00000611107 KCTD18Q6PI47 426 aaPredicted RBP7.34□□□□□ -1.23
SNCA-212ENST00000611107 ARL9Q6T311 187 aa7.34□□□□□ -1.23
SNCA-212ENST00000611107 UNQ6126/PRO20091Q6UXV3 157 aa7.34□□□□□ -1.23
SNCA-212ENST00000611107 ZNF679Q8IYX0 411 aa7.34□□□□□ -1.23
SNCA-212ENST00000611107 OR2T27Q8NH04 317 aa7.34□□□□□ -1.23
SNCA-212ENST00000611107 ASB17Q8WXJ9 295 aa7.34□□□□□ -1.23
SNCA-212ENST00000611107 Q96MT0 163 aa7.34□□□□□ -1.23
SNCA-212ENST00000611107 ANKRD60Q9BZ19 345 aa7.34□□□□□ -1.23
SNCA-212ENST00000611107 CHODLQ9H9P2 273 aa7.34□□□□□ -1.23
SNCA-212ENST00000611107 FAM206AQ9NX38 181 aa7.34□□□□□ -1.23
SNCA-212ENST00000611107 ZNF319Q9P2F9 582 aa7.34□□□□□ -1.23
SNCA-212ENST00000611107 MRM2Q9UI43 246 aaKnown RBP7.34□□□□□ -1.23
SNCA-212ENST00000611107 EXOGQ9Y2C4 368 aaKnown RBP7.34□□□□□ -1.23
SNCA-212ENST00000611107 MYRFQ9Y2G1 1151 aa7.34□□□□□ -1.23
SNCA-212ENST00000611107 HSPE1-MOB4S4R3N1 261 aa7.34□□□□□ -1.23
SNCA-212ENST00000611107 IGHV3-64DA0A0J9YX35 117 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 hCG_38984A0A1B0GV85 526 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 SNTNA6NMZ2 147 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 H0YL77 283 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 NDUFS8O00217 210 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 PNPP00491 289 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 ANXA2P07355 339 aaKnown RBP7.33□□□□□ -1.24
SNCA-212ENST00000611107 CSF3P09919 207 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 KITLGP21583 273 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 MYF6P23409 242 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 GCH1P30793 250 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 RIDAP52758 137 aaKnown RBP7.33□□□□□ -1.24
SNCA-212ENST00000611107 ACTC1P68032 377 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 ACTA1P68133 377 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 ZNF92Q03936 586 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 EGR3Q06889 387 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 RAB40BQ12829 278 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 CDK5R2Q13319 367 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 GK2Q14410 553 aaPredicted RBP7.33□□□□□ -1.24
SNCA-212ENST00000611107 ZNF718Q3SXZ3 478 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 CDONQ4KMG0 1287 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 DEGS2Q6QHC5 323 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 FAM57BQ71RH2 274 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 THAP5Q7Z6K1 395 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 KRT77Q7Z794 578 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 C1orf174Q8IYL3 243 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 OR8B12Q8NGG6 310 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 OR52I1Q8NGK6 324 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 RDH5Q92781 318 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 RNF166Q96A37 237 aaPredicted RBP7.33□□□□□ -1.24
SNCA-212ENST00000611107 SPSB4Q96A44 273 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 CMBLQ96DG6 245 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 C1orf159Q96HA4 380 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 COG8Q96MW5 612 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 ZNF649Q9BS31 505 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 MROQ9BYG7 248 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 NIPAL2Q9H841 368 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 LPAR2Q9HBW0 351 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 BRD7Q9NPI1 651 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 ACOXLQ9NUZ1 547 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 MRPS18AQ9NVS2 196 aaKnown RBP7.33□□□□□ -1.24
SNCA-212ENST00000611107 PURGQ9UJV8 347 aaKnown RBP7.33□□□□□ -1.24
SNCA-212ENST00000611107 IKZF2Q9UKS7 526 aa7.33□□□□□ -1.24
SNCA-212ENST00000611107 RPL36Q9Y3U8 105 aaKnown RBP7.33□□□□□ -1.24
SNCA-212ENST00000611107 LOC100289279A0A1B0GTE1 492 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 IQCF6A8MYZ5 107 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 C3orf80F5H4A9 247 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 SLC1A7O00341 560 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 TBX1O43435 398 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 XPNPEP2O43895 674 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 LMX1BO60663 402 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 ZNF254O75437 659 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 TGFAP01135 160 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 AVPP01185 164 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 IGLV3-1P01715 115 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 APOC1P02654 83 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 LIMS3P0CW19 117 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 LIMS4P0CW20 117 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 RAC2P15153 192 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 SELEP16581 610 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 TUBG1P23258 451 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 DCTDP32321 178 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 ATP6V1E1P36543 226 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 HSPA13P48723 471 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 ZNF81P51508 661 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 MVKQ03426 396 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 GFOD2Q3B7J2 385 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 ZNF829Q3KNS6 432 aaPredicted RBP7.32□□□□□ -1.24
SNCA-212ENST00000611107 TP53I3Q53FA7 332 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 OR2T2Q6IF00 324 aa7.32□□□□□ -1.24
SNCA-212ENST00000611107 C1orf229Q6ZS94 237 aaPredicted RBP7.32□□□□□ -1.24
SNCA-212ENST00000611107 OR5AS1Q8N127 324 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms