RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 PNPP00491 289 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 MRPL3P09001 348 aaKnown RBP8.92□□□□□ -0.98
TUBE1-210ENST00000604967 WNT2P09544 360 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 PRR23D2P0DMB1 279 aaPredicted RBP8.92□□□□□ -0.98
TUBE1-210ENST00000604967 EGR1P18146 543 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 TNFRSF1AP19438 455 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 ALOX5APP20292 161 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 TNFSF4P23510 183 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 APOFQ13790 326 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 TMEM155Q4W5P6 130 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 KLF17Q5JT82 389 aaPredicted RBP8.92□□□□□ -0.98
TUBE1-210ENST00000604967 AADACL4Q5VUY2 407 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 LRRN1Q6UXK5 716 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 ZNF841Q6ZN19 808 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 FAM57BQ71RH2 274 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 SLC16A9Q7RTY1 509 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 MRPL21Q7Z2W9 205 aaKnown RBP8.92□□□□□ -0.98
TUBE1-210ENST00000604967 PARP8Q8N3A8 854 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 FGFRL1Q8N441 504 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 SEMA6DQ8NFY4 1073 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 OR5K1Q8NHB7 308 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 Q8TCH9 128 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 SEH1LQ96EE3 360 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 NRBF2Q96F24 287 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 TIMD4Q96H15 378 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 TTTY10Q9BZA0 68 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 GABARAPL1Q9H0R8 117 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 TVP23BQ9NYZ1 205 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 CTSZQ9UBR2 303 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 POLR3KQ9Y2Y1 108 aaPredicted RBP8.92□□□□□ -0.98
TUBE1-210ENST00000604967 A0A1B0GW55 424 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 ZAR1LA6NP61 321 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 A8MXK9 166 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 E9PQ18 207 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.91□□□□□ -0.98
TUBE1-210ENST00000604967 PRODHO43272 600 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 IFNA2P01563 188 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 DUX4L2P0CJ85 424 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 DUX4L3P0CJ86 424 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 DUX4L4P0CJ87 422 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 DUX4L5P0CJ88 424 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 DUX4L6P0CJ89 424 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 DUX4L7P0CJ90 424 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 CD80P33681 288 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 MDH2P40926 338 aaKnown RBP8.91□□□□□ -0.98
TUBE1-210ENST00000604967 SLC3A1Q07837 685 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 MALLQ13021 153 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 ZNF181Q2M3W8 571 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 ZNF404Q494X3 552 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 SLX4IPQ5VYV7 408 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 C12orf73Q69YU5 71 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 DUX4L9Q6RFH8 374 aaPredicted RBP8.91□□□□□ -0.98
TUBE1-210ENST00000604967 OR8B12Q8NGG6 310 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 SPATA3Q8NHX4 192 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 SPRYD4Q8WW59 207 aaPredicted RBP8.91□□□□□ -0.98
TUBE1-210ENST00000604967 PYDC1Q8WXC3 89 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 UBE2FQ969M7 185 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 RAB39BQ96DA2 213 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 REEP6Q96HR9 211 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 TEAD3Q99594 435 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 CIB1Q99828 191 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 ADAT1Q9BUB4 502 aaKnown RBP8.91□□□□□ -0.98
TUBE1-210ENST00000604967 C19orf24Q9BVV8 132 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 SEMA6AQ9H2E6 1030 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 BRD7Q9NPI1 651 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 ESM1Q9NQ30 184 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 DUX4Q9UBX2 424 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 RHBDD3Q9Y3P4 386 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 AP4S1Q9Y587 144 aa8.91□□□□□ -0.98
TUBE1-210ENST00000604967 GGT3PA6NGU5 568 aa8.9□□□□□ -0.98
TUBE1-210ENST00000604967 C22orf46C9J442 243 aa8.9□□□□□ -0.98
TUBE1-210ENST00000604967 TBX1O43435 398 aa8.9□□□□□ -0.98
TUBE1-210ENST00000604967 SRSF10O75494 262 aaKnown RBP8.9□□□□□ -0.98
TUBE1-210ENST00000604967 LHBP01229 141 aa8.9□□□□□ -0.98
TUBE1-210ENST00000604967 TFF1P04155 84 aa8.9□□□□□ -0.98
TUBE1-210ENST00000604967 HMGN1P05114 100 aa8.9□□□□□ -0.98
TUBE1-210ENST00000604967 ANXA2P07355 339 aaKnown RBP8.9□□□□□ -0.98
TUBE1-210ENST00000604967 LYNP07948 512 aa8.9□□□□□ -0.98
TUBE1-210ENST00000604967 ZNF12P17014 697 aa8.9□□□□□ -0.98
TUBE1-210ENST00000604967 AMY2BP19961 511 aa8.9□□□□□ -0.98
TUBE1-210ENST00000604967 HNF1AP20823 631 aa8.9□□□□□ -0.98
TUBE1-210ENST00000604967 SRP14P37108 136 aaKnown RBP8.9□□□□□ -0.98
TUBE1-210ENST00000604967 SRP9P49458 86 aaKnown RBP8.9□□□□□ -0.98
TUBE1-210ENST00000604967 GSK3AP49840 483 aa8.9□□□□□ -0.98
TUBE1-210ENST00000604967 GRB2P62993 217 aaKnown RBP8.9□□□□□ -0.98
TUBE1-210ENST00000604967 CSNK2BP67870 215 aa8.9□□□□□ -0.98
TUBE1-210ENST00000604967 MFGE8Q08431 387 aaPredicted RBP8.9□□□□□ -0.98
TUBE1-210ENST00000604967 POU4F2Q12837 409 aa8.9□□□□□ -0.98
TUBE1-210ENST00000604967 OR8G1Q15617 311 aa8.9□□□□□ -0.98
TUBE1-210ENST00000604967 SNAPC1Q16533 368 aa8.9□□□□□ -0.98
TUBE1-210ENST00000604967 DMRTC1Q5HYR2 192 aa8.9□□□□□ -0.98
TUBE1-210ENST00000604967 C1orf146Q5VVC0 180 aa8.9□□□□□ -0.98
TUBE1-210ENST00000604967 SSX6Q7RTT6 188 aa8.9□□□□□ -0.98
TUBE1-210ENST00000604967 C1QL2Q7Z5L3 287 aa8.9□□□□□ -0.98
TUBE1-210ENST00000604967 KLBQ86Z14 1044 aa8.9□□□□□ -0.98
TUBE1-210ENST00000604967 BCL6BQ8N143 479 aaPredicted RBP8.9□□□□□ -0.98
TUBE1-210ENST00000604967 GCSAMQ8N6F7 178 aa8.9□□□□□ -0.98
TUBE1-210ENST00000604967 TCEANCQ8N8B7 351 aa8.9□□□□□ -0.98
TUBE1-210ENST00000604967 THEM6Q8WUY1 208 aa8.9□□□□□ -0.98
TUBE1-210ENST00000604967 HPSE2Q8WWQ2 592 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms