RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 PEG10Q86TG7 708 aaKnown RBP14.25□□□□□ -0.13
TRIM28-215ENST00000601150 OR51G2Q8NGK0 314 aa14.25□□□□□ -0.13
TRIM28-215ENST00000601150 CLDND2Q8NHS1 167 aa14.25□□□□□ -0.13
TRIM28-215ENST00000601150 MSI2Q96DH6 328 aaKnown RBP14.25□□□□□ -0.13
TRIM28-215ENST00000601150 REEP6Q96HR9 211 aa14.25□□□□□ -0.13
TRIM28-215ENST00000601150 OR8B4Q96RC9 309 aa14.25□□□□□ -0.13
TRIM28-215ENST00000601150 MROQ9BYG7 248 aa14.25□□□□□ -0.13
TRIM28-215ENST00000601150 RGCCQ9H4X1 137 aa14.25□□□□□ -0.13
TRIM28-215ENST00000601150 TMEM106BQ9NUM4 274 aa14.25□□□□□ -0.13
TRIM28-215ENST00000601150 CLN6Q9NWW5 311 aa14.25□□□□□ -0.13
TRIM28-215ENST00000601150 MRPL15Q9P015 296 aaKnown RBP14.25□□□□□ -0.13
TRIM28-215ENST00000601150 WIPI2Q9Y4P8 454 aa14.25□□□□□ -0.13
TRIM28-215ENST00000601150 MALRD1Q5VYJ5 2156 aa14.24□□□□□ -0.13
TRIM28-215ENST00000601150 FN1P02751 2386 aaKnown RBP14.24□□□□□ -0.13
TRIM28-215ENST00000601150 LOC100289279A0A1B0GTE1 492 aa14.24□□□□□ -0.13
TRIM28-215ENST00000601150 ZNF670-ZNF695F2Z2N8 137 aa14.24□□□□□ -0.13
TRIM28-215ENST00000601150 IFNL4K9M1U5 179 aa14.24□□□□□ -0.13
TRIM28-215ENST00000601150 PSMD9O00233 223 aa14.24□□□□□ -0.13
TRIM28-215ENST00000601150 WNT9BO14905 357 aa14.24□□□□□ -0.13
TRIM28-215ENST00000601150 HLA-DPB1P04440 258 aa14.24□□□□□ -0.13
TRIM28-215ENST00000601150 CA6P23280 308 aa14.24□□□□□ -0.13
TRIM28-215ENST00000601150 FAM3AP98173 230 aa14.24□□□□□ -0.13
TRIM28-215ENST00000601150 OR8G1Q15617 311 aa14.24□□□□□ -0.13
TRIM28-215ENST00000601150 ZNF679Q8IYX0 411 aa14.24□□□□□ -0.13
TRIM28-215ENST00000601150 RFLNBQ8N5W9 214 aa14.24□□□□□ -0.13
TRIM28-215ENST00000601150 OR56B2PQ8NGI1 322 aa14.24□□□□□ -0.13
TRIM28-215ENST00000601150 UBE2FQ969M7 185 aa14.24□□□□□ -0.13
TRIM28-215ENST00000601150 C1orf159Q96HA4 380 aa14.24□□□□□ -0.13
TRIM28-215ENST00000601150 SOX7Q9BT81 388 aa14.24□□□□□ -0.13
TRIM28-215ENST00000601150 TTTY10Q9BZA0 68 aa14.24□□□□□ -0.13
TRIM28-215ENST00000601150 GCM1Q9NP62 436 aa14.24□□□□□ -0.13
TRIM28-215ENST00000601150 ZNF319Q9P2F9 582 aa14.24□□□□□ -0.13
TRIM28-215ENST00000601150 IKZF2Q9UKS7 526 aa14.24□□□□□ -0.13
TRIM28-215ENST00000601150 GMPPBQ9Y5P6 360 aa14.24□□□□□ -0.13
TRIM28-215ENST00000601150 hCG_38984A0A1B0GV85 526 aa14.23□□□□□ -0.13
TRIM28-215ENST00000601150 ACOD1A6NK06 481 aa14.23□□□□□ -0.13
TRIM28-215ENST00000601150 PRR32B1ATL7 298 aa14.23□□□□□ -0.13
TRIM28-215ENST00000601150 GMDSO60547 372 aa14.23□□□□□ -0.13
TRIM28-215ENST00000601150 ANPEPP15144 967 aa14.23□□□□□ -0.13
TRIM28-215ENST00000601150 HOXB4P17483 251 aaPredicted RBP14.23□□□□□ -0.13
TRIM28-215ENST00000601150 DCTDP32321 178 aa14.23□□□□□ -0.13
TRIM28-215ENST00000601150 RIDAP52758 137 aaKnown RBP14.23□□□□□ -0.13
TRIM28-215ENST00000601150 CXCR4P61073 352 aa14.23□□□□□ -0.13
TRIM28-215ENST00000601150 SNRPGP62308 76 aaKnown RBP14.23□□□□□ -0.13
TRIM28-215ENST00000601150 GFOD2Q3B7J2 385 aa14.23□□□□□ -0.13
TRIM28-215ENST00000601150 FAM166AQ6J272 317 aa14.23□□□□□ -0.13
TRIM28-215ENST00000601150 ZNF322Q6U7Q0 402 aaPredicted RBP14.23□□□□□ -0.13
TRIM28-215ENST00000601150 CELF2-AS1Q8N7Q2 184 aa14.23□□□□□ -0.13
TRIM28-215ENST00000601150 LINC01356Q8N9X3 169 aa14.23□□□□□ -0.13
TRIM28-215ENST00000601150 ADAT1Q9BUB4 502 aaKnown RBP14.23□□□□□ -0.13
TRIM28-215ENST00000601150 DCAF16Q9NXF7 216 aa14.23□□□□□ -0.13
TRIM28-215ENST00000601150 ZNF391Q9UJN7 358 aa14.23□□□□□ -0.13
TRIM28-215ENST00000601150 TMEM269A0A1B0GVZ9 245 aa14.22□□□□□ -0.13
TRIM28-215ENST00000601150 ANKRD30BLA7E2S9 258 aa14.22□□□□□ -0.13
TRIM28-215ENST00000601150 ANKRD65E5RJM6 399 aa14.22□□□□□ -0.13
TRIM28-215ENST00000601150 TGFAP01135 160 aa14.22□□□□□ -0.13
TRIM28-215ENST00000601150 OR2T7P0C7T2 308 aa14.22□□□□□ -0.13
TRIM28-215ENST00000601150 ATP6V1E1P36543 226 aa14.22□□□□□ -0.13
TRIM28-215ENST00000601150 CD200P41217 278 aa14.22□□□□□ -0.13
TRIM28-215ENST00000601150 GSK3AP49840 483 aa14.22□□□□□ -0.13
TRIM28-215ENST00000601150 MMP16P51512 607 aa14.22□□□□□ -0.13
TRIM28-215ENST00000601150 CDH15P55291 814 aa14.22□□□□□ -0.13
TRIM28-215ENST00000601150 LMO4P61968 165 aa14.22□□□□□ -0.13
TRIM28-215ENST00000601150 EGR3Q06889 387 aa14.22□□□□□ -0.13
TRIM28-215ENST00000601150 RCN1Q15293 331 aa14.22□□□□□ -0.13
TRIM28-215ENST00000601150 ZNF829Q3KNS6 432 aaPredicted RBP14.22□□□□□ -0.13
TRIM28-215ENST00000601150 SLC25A30Q5SVS4 291 aa14.22□□□□□ -0.13
TRIM28-215ENST00000601150 MEDAGQ5VYS4 303 aa14.22□□□□□ -0.13
TRIM28-215ENST00000601150 KLBQ86Z14 1044 aa14.22□□□□□ -0.13
TRIM28-215ENST00000601150 OR8B12Q8NGG6 310 aa14.22□□□□□ -0.13
TRIM28-215ENST00000601150 OR2T27Q8NH04 317 aa14.22□□□□□ -0.13
TRIM28-215ENST00000601150 KCNS2Q9ULS6 477 aa14.22□□□□□ -0.13
TRIM28-215ENST00000601150 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.22□□□□□ -0.13
TRIM28-215ENST00000601150 NPTNQ9Y639 398 aa14.22□□□□□ -0.13
TRIM28-215ENST00000601150 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.21□□□□□ -0.13
TRIM28-215ENST00000601150 IGHV3-64DA0A0J9YX35 117 aa14.21□□□□□ -0.13
TRIM28-215ENST00000601150 ISPDA4D126 451 aa14.21□□□□□ -0.13
TRIM28-215ENST00000601150 B4DSR2 109 aa14.21□□□□□ -0.13
TRIM28-215ENST00000601150 LMX1BO60663 402 aa14.21□□□□□ -0.13
TRIM28-215ENST00000601150 ENTPD6O75354 484 aa14.21□□□□□ -0.13
TRIM28-215ENST00000601150 APOL3O95236 402 aa14.21□□□□□ -0.13
TRIM28-215ENST00000601150 GATA4P43694 442 aa14.21□□□□□ -0.13
TRIM28-215ENST00000601150 HNRNPA0Q13151 305 aaKnown RBP14.21□□□□□ -0.13
TRIM28-215ENST00000601150 MAB21L1Q13394 359 aa14.21□□□□□ -0.13
TRIM28-215ENST00000601150 SNCBQ16143 134 aa14.21□□□□□ -0.13
TRIM28-215ENST00000601150 OCLNQ16625 522 aa14.21□□□□□ -0.13
TRIM28-215ENST00000601150 MOGAT3Q86VF5 341 aa14.21□□□□□ -0.13
TRIM28-215ENST00000601150 SPERTQ8NA61 448 aa14.21□□□□□ -0.13
TRIM28-215ENST00000601150 CSNK2A3Q8NEV1 391 aa14.21□□□□□ -0.13
TRIM28-215ENST00000601150 ZNF420Q8TAQ5 688 aaPredicted RBP14.21□□□□□ -0.13
TRIM28-215ENST00000601150 RAB39BQ96DA2 213 aa14.21□□□□□ -0.13
TRIM28-215ENST00000601150 RDH12Q96NR8 316 aa14.21□□□□□ -0.13
TRIM28-215ENST00000601150 SIGLEC11Q96RL6 698 aa14.21□□□□□ -0.13
TRIM28-215ENST00000601150 TBX5Q99593 518 aa14.21□□□□□ -0.13
TRIM28-215ENST00000601150 GAL3ST1Q99999 423 aa14.21□□□□□ -0.13
TRIM28-215ENST00000601150 APOL4Q9BPW4 351 aa14.21□□□□□ -0.13
TRIM28-215ENST00000601150 ZNF665Q9H7R5 613 aa14.21□□□□□ -0.13
TRIM28-215ENST00000601150 FAM118AQ9NWS6 357 aa14.21□□□□□ -0.13
TRIM28-215ENST00000601150 TMEM160Q9NX00 188 aa14.21□□□□□ -0.13
TRIM28-215ENST00000601150 FAM206AQ9NX38 181 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms