RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	H2BFM	P0C1H6	154 aa		13	□□□□□ -0.33
PLD3-223	ENST00000600948	ZFP36	P26651	326 aa	Known RBP	13	□□□□□ -0.33
PLD3-223	ENST00000600948	EPHA2	P29317	976 aa		13	□□□□□ -0.33
PLD3-223	ENST00000600948	MDH2	P40926	338 aa	Known RBP	13	□□□□□ -0.33
PLD3-223	ENST00000600948	RPS7	P62081	194 aa	Known RBP	13	□□□□□ -0.33
PLD3-223	ENST00000600948	LCN2	P80188	198 aa		13	□□□□□ -0.33
PLD3-223	ENST00000600948	PRAMEF6	Q5VXH4	476 aa		13	□□□□□ -0.33
PLD3-223	ENST00000600948	SLX4IP	Q5VYV7	408 aa		13	□□□□□ -0.33
PLD3-223	ENST00000600948	FAHD2B	Q6P2I3	314 aa	Predicted RBP	13	□□□□□ -0.33
PLD3-223	ENST00000600948	C1orf229	Q6ZS94	237 aa	Predicted RBP	13	□□□□□ -0.33
PLD3-223	ENST00000600948	FAM57B	Q71RH2	274 aa		13	□□□□□ -0.33
PLD3-223	ENST00000600948	SLC16A9	Q7RTY1	509 aa		13	□□□□□ -0.33
PLD3-223	ENST00000600948	ZDHHC13	Q8IUH4	622 aa		13	□□□□□ -0.33
PLD3-223	ENST00000600948	KLHL36	Q8N4N3	616 aa		13	□□□□□ -0.33
PLD3-223	ENST00000600948		Q8TCH9	128 aa		13	□□□□□ -0.33
PLD3-223	ENST00000600948	THEM6	Q8WUY1	208 aa		13	□□□□□ -0.33
PLD3-223	ENST00000600948	DVL3	Q92997	716 aa	Predicted RBP	13	□□□□□ -0.33
PLD3-223	ENST00000600948	FAHD2A	Q96GK7	314 aa		13	□□□□□ -0.33
PLD3-223	ENST00000600948	ADAT1	Q9BUB4	502 aa	Known RBP	13	□□□□□ -0.33
PLD3-223	ENST00000600948	TMPRSS13	Q9BYE2	586 aa		13	□□□□□ -0.33
PLD3-223	ENST00000600948	SP140L	Q9H930	580 aa		13	□□□□□ -0.33
PLD3-223	ENST00000600948	MRPL15	Q9P015	296 aa	Known RBP	13	□□□□□ -0.33
PLD3-223	ENST00000600948	ZNF319	Q9P2F9	582 aa		13	□□□□□ -0.33
PLD3-223	ENST00000600948	PCDHB10	Q9UN67	800 aa		13	□□□□□ -0.33
PLD3-223	ENST00000600948		A0A0G2JMP0	313 aa		12.99	□□□□□ -0.33
PLD3-223	ENST00000600948		A0A0X1KG70	313 aa		12.99	□□□□□ -0.33
PLD3-223	ENST00000600948	hCG_38984	A0A1B0GV85	526 aa		12.99	□□□□□ -0.33
PLD3-223	ENST00000600948	ZAR1L	A6NP61	321 aa		12.99	□□□□□ -0.33
PLD3-223	ENST00000600948	CEACAM18	A8MTB9	384 aa		12.99	□□□□□ -0.33
PLD3-223	ENST00000600948	RNF212B	A8MTL3	300 aa		12.99	□□□□□ -0.33
PLD3-223	ENST00000600948		M0R129	80 aa		12.99	□□□□□ -0.33
PLD3-223	ENST00000600948	ZNF205	O95201	554 aa		12.99	□□□□□ -0.33
PLD3-223	ENST00000600948	PTBP3	O95758	552 aa	Known RBP	12.99	□□□□□ -0.33
PLD3-223	ENST00000600948	ALOX5AP	P20292	161 aa		12.99	□□□□□ -0.33
PLD3-223	ENST00000600948	SEC61A1	P61619	476 aa	Known RBP	12.99	□□□□□ -0.33
PLD3-223	ENST00000600948	FAM3A	P98173	230 aa		12.99	□□□□□ -0.33
PLD3-223	ENST00000600948	MPPED2	Q15777	294 aa		12.99	□□□□□ -0.33
PLD3-223	ENST00000600948	TIGD6	Q17RP2	521 aa		12.99	□□□□□ -0.33
PLD3-223	ENST00000600948	DCAF12L2	Q5VW00	463 aa		12.99	□□□□□ -0.33
PLD3-223	ENST00000600948	MUC20	Q8N307	709 aa	Predicted RBP	12.99	□□□□□ -0.33
PLD3-223	ENST00000600948	OR4M2	Q8NGB6	313 aa		12.99	□□□□□ -0.33
PLD3-223	ENST00000600948	OR52H1	Q8NGJ2	320 aa		12.99	□□□□□ -0.33
PLD3-223	ENST00000600948	ERGIC1	Q969X5	290 aa		12.99	□□□□□ -0.33
PLD3-223	ENST00000600948	SGK3	Q96BR1	496 aa		12.99	□□□□□ -0.33
PLD3-223	ENST00000600948	REEP6	Q96HR9	211 aa		12.99	□□□□□ -0.33
PLD3-223	ENST00000600948	TEAD3	Q99594	435 aa		12.99	□□□□□ -0.33
PLD3-223	ENST00000600948	YIPF3	Q9GZM5	350 aa		12.99	□□□□□ -0.33
PLD3-223	ENST00000600948	TMEM165	Q9HC07	324 aa		12.99	□□□□□ -0.33
PLD3-223	ENST00000600948	BRD7	Q9NPI1	651 aa		12.99	□□□□□ -0.33
PLD3-223	ENST00000600948	PPIAL4E	A0A075B759	164 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	PPIAL4C	A0A0B4J2A2	164 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	LRRC30	A6NM36	301 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948		A8MXK9	166 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	PPIAL4D	F5H284	164 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948		J3QLI3	93 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	FAM20B	O75063	409 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	FOXH1	O75593	365 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	FSTL3	O95633	263 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	PPIAL4F	P0DN26	164 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	GATA3	P23771	443 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	DDOST	P39656	456 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	HCCS	P53701	268 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	EFNB1	P98172	346 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	FAM201A	Q5SY85	155 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	C12orf73	Q69YU5	71 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	LRRN1	Q6UXK5	716 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	CCDC121	Q6ZUS5	278 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	KLB	Q86Z14	1044 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	C1orf87	Q8N0U7	546 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	CENPN	Q96H22	339 aa	Predicted RBP	12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	PGAM5	Q96HS1	289 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	CIB1	Q99828	191 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	PRRG3	Q9BZD7	231 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	OR10A2	Q9H208	303 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	SEMA6A	Q9H2E6	1030 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	METTL17	Q9H7H0	456 aa	Predicted RBP	12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	UFSP2	Q9NUQ7	469 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	LAMP5	Q9UJQ1	280 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	LRP12	Q9Y561	859 aa		12.98	□□□□□ -0.33
PLD3-223	ENST00000600948	LOC105371242	A0A075B767	164 aa		12.97	□□□□□ -0.33
PLD3-223	ENST00000600948	MRPL3	P09001	348 aa	Known RBP	12.97	□□□□□ -0.33
PLD3-223	ENST00000600948	WNT2	P09544	360 aa		12.97	□□□□□ -0.33
PLD3-223	ENST00000600948	CFL1	P23528	166 aa	Known RBP	12.97	□□□□□ -0.33
PLD3-223	ENST00000600948	PSMA6	P60900	246 aa	Known RBP	12.97	□□□□□ -0.33
PLD3-223	ENST00000600948	SRSF2	Q01130	221 aa	Known RBP	12.97	□□□□□ -0.33
PLD3-223	ENST00000600948	ZNF404	Q494X3	552 aa		12.97	□□□□□ -0.33
PLD3-223	ENST00000600948	LCN1P1	Q5VSP4	162 aa		12.97	□□□□□ -0.33
PLD3-223	ENST00000600948	AADACL4	Q5VUY2	407 aa		12.97	□□□□□ -0.33
PLD3-223	ENST00000600948	BCDIN3D	Q7Z5W3	292 aa	Known RBP	12.97	□□□□□ -0.33
PLD3-223	ENST00000600948	PHC2	Q8IXK0	858 aa		12.97	□□□□□ -0.33
PLD3-223	ENST00000600948	RFLNB	Q8N5W9	214 aa		12.97	□□□□□ -0.33
PLD3-223	ENST00000600948	TCEANC	Q8N8B7	351 aa		12.97	□□□□□ -0.33
PLD3-223	ENST00000600948	SPERT	Q8NA61	448 aa		12.97	□□□□□ -0.33
PLD3-223	ENST00000600948	PLPP7	Q8NBV4	271 aa		12.97	□□□□□ -0.33
PLD3-223	ENST00000600948	OR11L1	Q8NGX0	322 aa		12.97	□□□□□ -0.33
PLD3-223	ENST00000600948	PYDC1	Q8WXC3	89 aa		12.97	□□□□□ -0.33
PLD3-223	ENST00000600948	TMEM158	Q8WZ71	300 aa		12.97	□□□□□ -0.33
PLD3-223	ENST00000600948	TMEM246	Q9BRR3	403 aa		12.97	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms