RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 PPIHO43447 177 aaKnown RBP7.39□□□□□ -1.23
SSBP4-208ENST00000600628 XRCC2O43543 280 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 GMDSO60547 372 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 IFNA2P01563 188 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 SBK2P0C263 348 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 PPIAL4FP0DN26 164 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 SLC2A1P11166 492 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 CPT2P23786 658 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 ACKR3P25106 362 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 RBMXP38159 391 aaKnown RBP7.39□□□□□ -1.23
SSBP4-208ENST00000600628 NAA10P41227 235 aaPredicted RBP7.39□□□□□ -1.23
SSBP4-208ENST00000600628 CX3CR1P49238 355 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 MMP16P51512 607 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 PRKXP51817 358 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 HCCSP53701 268 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 PRSS12P56730 875 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 ZNF121P58317 390 aaPredicted RBP7.39□□□□□ -1.23
SSBP4-208ENST00000600628 PSMA6P60900 246 aaKnown RBP7.39□□□□□ -1.23
SSBP4-208ENST00000600628 SNRPGP62308 76 aaKnown RBP7.39□□□□□ -1.23
SSBP4-208ENST00000600628 PAX2Q02962 417 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 SLC3A1Q07837 685 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 MALLQ13021 153 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 TMED1Q13445 227 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 TMEM155Q4W5P6 130 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 FAM76BQ5HYJ3 339 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 FAM120AOSQ5T036 256 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 C10orf67Q8IYJ2 551 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 ZNF679Q8IYX0 411 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 OR5AS1Q8N127 324 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 PQLC1Q8N2U9 271 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 RFLNBQ8N5W9 214 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 TCEANCQ8N8B7 351 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 OR10AD1Q8NGE0 317 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 OR8J1Q8NGP2 316 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 TRUB1Q8WWH5 349 aaKnown RBP7.39□□□□□ -1.23
SSBP4-208ENST00000600628 CCL17Q92583 94 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 ERGIC1Q969X5 290 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 EME1Q96AY2 570 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 LYZL4Q96KX0 146 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 MNTQ99583 582 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 MDFIQ99750 246 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 SLC29A1Q99808 456 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 TEX12Q9BXU0 123 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 PRRG3Q9BZD7 231 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 SLC22A4Q9H015 551 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 SHARPINQ9H0F6 387 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 TLNRD1Q9H1K6 362 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 RGCCQ9H4X1 137 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 G6PC2Q9NQR9 355 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 CENPMQ9NSP4 180 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 TMEM106BQ9NUM4 274 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 TMEM100Q9NV29 134 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 ZNF391Q9UJN7 358 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 PPP1R3CQ9UQK1 317 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 LRP12Q9Y561 859 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 NPTNQ9Y639 398 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 TENM1Q9UKZ4 2725 aa7.39□□□□□ -1.23
SSBP4-208ENST00000600628 SAC3D1A6NKF1 404 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 A8MXK9 166 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 F5H5P2 479 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 ZNF254O75437 659 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 LHBP01229 141 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 HLA-DPB1P04440 258 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 TNFSF4P23510 183 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 HTR1FP30939 366 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 CFHR2P36980 270 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 SLC6A9P48067 706 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 SRP9P49458 86 aaKnown RBP7.38□□□□□ -1.23
SSBP4-208ENST00000600628 GSK3AP49840 483 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 ZMYND11Q15326 602 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 LCN1P1Q5VSP4 162 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 LRRN1Q6UXK5 716 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 C1orf229Q6ZS94 237 aaPredicted RBP7.38□□□□□ -1.23
SSBP4-208ENST00000600628 GID4Q8IVV7 300 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 C11orf53Q8IXP5 236 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 BHLHE23Q8NDY6 225 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 OR8B12Q8NGG6 310 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 OR56B2PQ8NGI1 322 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 ASB17Q8WXJ9 295 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 RAB1CQ92928 201 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 ITPKCQ96DU7 683 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 PLEKHA8Q96JA3 519 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 OR8B4Q96RC9 309 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 IL4I1Q96RQ9 567 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 MBOAT4Q96T53 435 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 ZNF665Q9H7R5 613 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 SP140LQ9H930 580 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 TMEM165Q9HC07 324 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 CLN6Q9NWW5 311 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 TREM2Q9NZC2 230 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 WARS2Q9UGM6 360 aaKnown RBP7.38□□□□□ -1.23
SSBP4-208ENST00000600628 NUFIP1Q9UHK0 495 aaKnown RBP7.38□□□□□ -1.23
SSBP4-208ENST00000600628 NOP16Q9Y3C1 178 aaKnown RBP7.38□□□□□ -1.23
SSBP4-208ENST00000600628 TMEM14AQ9Y6G1 99 aa7.38□□□□□ -1.23
SSBP4-208ENST00000600628 SLC16A6O15403 523 aa7.37□□□□□ -1.23
SSBP4-208ENST00000600628 PNPP00491 289 aa7.37□□□□□ -1.23
SSBP4-208ENST00000600628 CST4P01036 141 aa7.37□□□□□ -1.23
SSBP4-208ENST00000600628 FSHBP01225 129 aa7.37□□□□□ -1.23
SSBP4-208ENST00000600628 MSMBP08118 114 aa7.37□□□□□ -1.23
SSBP4-208ENST00000600628 H2BFMP0C1H6 154 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms