RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 XRCC2O43543 280 aa16.5■□□□□ 0.23
SHKBP1-221ENST00000599833 CLIC3O95833 236 aa16.5■□□□□ 0.23
SHKBP1-221ENST00000599833 ANXA2P07355 339 aaKnown RBP16.5■□□□□ 0.23
SHKBP1-221ENST00000599833 SELEP16581 610 aa16.5■□□□□ 0.23
SHKBP1-221ENST00000599833 EGR3Q06889 387 aa16.5■□□□□ 0.23
SHKBP1-221ENST00000599833 POU4F2Q12837 409 aa16.5■□□□□ 0.23
SHKBP1-221ENST00000599833 ZNF691Q5VV52 312 aa16.5■□□□□ 0.23
SHKBP1-221ENST00000599833 MEDAGQ5VYS4 303 aa16.5■□□□□ 0.23
SHKBP1-221ENST00000599833 KCTD18Q6PI47 426 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-221ENST00000599833 MRPL21Q7Z2W9 205 aaKnown RBP16.5■□□□□ 0.23
SHKBP1-221ENST00000599833 KRT77Q7Z794 578 aa16.5■□□□□ 0.23
SHKBP1-221ENST00000599833 OR2Z1Q8NG97 314 aa16.5■□□□□ 0.23
SHKBP1-221ENST00000599833 OR10AD1Q8NGE0 317 aa16.5■□□□□ 0.23
SHKBP1-221ENST00000599833 OR52H1Q8NGJ2 320 aa16.5■□□□□ 0.23
SHKBP1-221ENST00000599833 RFKQ969G6 155 aa16.5■□□□□ 0.23
SHKBP1-221ENST00000599833 PPP1R14AQ96A00 147 aa16.5■□□□□ 0.23
SHKBP1-221ENST00000599833 REEP6Q96HR9 211 aa16.5■□□□□ 0.23
SHKBP1-221ENST00000599833 ZNF649Q9BS31 505 aa16.5■□□□□ 0.23
SHKBP1-221ENST00000599833 G6PC2Q9NQR9 355 aa16.5■□□□□ 0.23
SHKBP1-221ENST00000599833 IL19Q9UHD0 177 aa16.5■□□□□ 0.23
SHKBP1-221ENST00000599833 EXOGQ9Y2C4 368 aaKnown RBP16.5■□□□□ 0.23
SHKBP1-221ENST00000599833 CDC14BO60729 498 aa16.49■□□□□ 0.23
SHKBP1-221ENST00000599833 HLA-DPB1P04440 258 aa16.49■□□□□ 0.23
SHKBP1-221ENST00000599833 OR2T7P0C7T2 308 aa16.49■□□□□ 0.23
SHKBP1-221ENST00000599833 USF1P22415 310 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-221ENST00000599833 ACKR3P25106 362 aa16.49■□□□□ 0.23
SHKBP1-221ENST00000599833 MTNR1AP48039 350 aa16.49■□□□□ 0.23
SHKBP1-221ENST00000599833 MMP16P51512 607 aa16.49■□□□□ 0.23
SHKBP1-221ENST00000599833 TNFAIP6P98066 277 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-221ENST00000599833 ZNF91Q05481 1191 aa16.49■□□□□ 0.23
SHKBP1-221ENST00000599833 MAB21L1Q13394 359 aa16.49■□□□□ 0.23
SHKBP1-221ENST00000599833 OR8B8Q15620 311 aa16.49■□□□□ 0.23
SHKBP1-221ENST00000599833 CARTPTQ16568 116 aa16.49■□□□□ 0.23
SHKBP1-221ENST00000599833 KRT74Q7RTS7 529 aa16.49■□□□□ 0.23
SHKBP1-221ENST00000599833 OR56B2PQ8NGI1 322 aa16.49■□□□□ 0.23
SHKBP1-221ENST00000599833 OR2T27Q8NH04 317 aa16.49■□□□□ 0.23
SHKBP1-221ENST00000599833 ITLN1Q8WWA0 313 aa16.49■□□□□ 0.23
SHKBP1-221ENST00000599833 LGALS12Q96DT0 336 aa16.49■□□□□ 0.23
SHKBP1-221ENST00000599833 RNFT2Q96EX2 444 aa16.49■□□□□ 0.23
SHKBP1-221ENST00000599833 TBX5Q99593 518 aa16.49■□□□□ 0.23
SHKBP1-221ENST00000599833 OPA3Q9H6K4 179 aa16.49■□□□□ 0.23
SHKBP1-221ENST00000599833 PPP1R3EQ9H7J1 279 aa16.49■□□□□ 0.23
SHKBP1-221ENST00000599833 RNPEPL1Q9HAU8 725 aa16.49■□□□□ 0.23
SHKBP1-221ENST00000599833 BRD7Q9NPI1 651 aa16.49■□□□□ 0.23
SHKBP1-221ENST00000599833 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.49■□□□□ 0.23
SHKBP1-221ENST00000599833 N6AMT1Q9Y5N5 214 aa16.49■□□□□ 0.23
SHKBP1-221ENST00000599833 PHYHO14832 338 aa16.48■□□□□ 0.23
SHKBP1-221ENST00000599833 TBX1O43435 398 aa16.48■□□□□ 0.23
SHKBP1-221ENST00000599833 PTBP3O95758 552 aaKnown RBP16.48■□□□□ 0.23
SHKBP1-221ENST00000599833 HEXAP06865 529 aa16.48■□□□□ 0.23
SHKBP1-221ENST00000599833 DBTP11182 482 aaKnown RBP16.48■□□□□ 0.23
SHKBP1-221ENST00000599833 IL2RGP31785 369 aa16.48■□□□□ 0.23
SHKBP1-221ENST00000599833 SLC34A1Q06495 639 aa16.48■□□□□ 0.23
SHKBP1-221ENST00000599833 SMN1Q16637 294 aaKnown RBP16.48■□□□□ 0.23
SHKBP1-221ENST00000599833 TMEM249Q2WGJ8 235 aa16.48■□□□□ 0.23
SHKBP1-221ENST00000599833 LAIR2Q6ISS4 152 aa16.48■□□□□ 0.23
SHKBP1-221ENST00000599833 PLEKHG7Q6ZR37 379 aa16.48■□□□□ 0.23
SHKBP1-221ENST00000599833 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.48■□□□□ 0.23
SHKBP1-221ENST00000599833 OR13G1Q8NGZ3 307 aa16.48■□□□□ 0.23
SHKBP1-221ENST00000599833 MEGF10Q96KG7 1140 aa16.48■□□□□ 0.23
SHKBP1-221ENST00000599833 OR2V2Q96R30 315 aa16.48■□□□□ 0.23
SHKBP1-221ENST00000599833 SIGLEC11Q96RL6 698 aa16.48■□□□□ 0.23
SHKBP1-221ENST00000599833 MROQ9BYG7 248 aa16.48■□□□□ 0.23
SHKBP1-221ENST00000599833 OR10A2Q9H208 303 aa16.48■□□□□ 0.23
SHKBP1-221ENST00000599833 DECR2Q9NUI1 292 aa16.48■□□□□ 0.23
SHKBP1-221ENST00000599833 MRPS18AQ9NVS2 196 aaKnown RBP16.48■□□□□ 0.23
SHKBP1-221ENST00000599833 TREM2Q9NZC2 230 aa16.48■□□□□ 0.23
SHKBP1-221ENST00000599833 TMEM269A0A1B0GVZ9 245 aa16.47■□□□□ 0.23
SHKBP1-221ENST00000599833 LRP5LA4QPB2 252 aa16.47■□□□□ 0.23
SHKBP1-221ENST00000599833 ACOD1A6NK06 481 aa16.47■□□□□ 0.23
SHKBP1-221ENST00000599833 ZNF670-ZNF695F2Z2N8 137 aa16.47■□□□□ 0.23
SHKBP1-221ENST00000599833 F5H5P2 479 aa16.47■□□□□ 0.23
SHKBP1-221ENST00000599833 IGHV4-31P0DP07 118 aa16.47■□□□□ 0.23
SHKBP1-221ENST00000599833 PMELP40967 661 aa16.47■□□□□ 0.23
SHKBP1-221ENST00000599833 GSK3AP49840 483 aa16.47■□□□□ 0.23
SHKBP1-221ENST00000599833 RIDAP52758 137 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-221ENST00000599833 TMEM33P57088 247 aa16.47■□□□□ 0.23
SHKBP1-221ENST00000599833 C1orf159Q96HA4 380 aa16.47■□□□□ 0.23
SHKBP1-221ENST00000599833 PGAM5Q96HS1 289 aa16.47■□□□□ 0.23
SHKBP1-221ENST00000599833 PBOV1Q9GZY1 135 aa16.47■□□□□ 0.23
SHKBP1-221ENST00000599833 SP140LQ9H930 580 aa16.47■□□□□ 0.23
SHKBP1-221ENST00000599833 GCM1Q9NP62 436 aa16.47■□□□□ 0.23
SHKBP1-221ENST00000599833 TMEM100Q9NV29 134 aa16.47■□□□□ 0.23
SHKBP1-221ENST00000599833 MRPL15Q9P015 296 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-221ENST00000599833 NUFIP1Q9UHK0 495 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-221ENST00000599833 MXRA5Q9NR99 2828 aa16.47■□□□□ 0.23
SHKBP1-221ENST00000599833 A0A0U1RQV5 110 aa16.46■□□□□ 0.23
SHKBP1-221ENST00000599833 LOC100289279A0A1B0GTE1 492 aa16.46■□□□□ 0.23
SHKBP1-221ENST00000599833 MPZL2O60487 215 aa16.46■□□□□ 0.23
SHKBP1-221ENST00000599833 TTRP02766 147 aa16.46■□□□□ 0.23
SHKBP1-221ENST00000599833 GNAO1P09471 354 aa16.46■□□□□ 0.23
SHKBP1-221ENST00000599833 CA6P23280 308 aa16.46■□□□□ 0.23
SHKBP1-221ENST00000599833 CD200P41217 278 aa16.46■□□□□ 0.23
SHKBP1-221ENST00000599833 GATA4P43694 442 aa16.46■□□□□ 0.23
SHKBP1-221ENST00000599833 TIGD6Q17RP2 521 aa16.46■□□□□ 0.23
SHKBP1-221ENST00000599833 CDONQ4KMG0 1287 aa16.46■□□□□ 0.23
SHKBP1-221ENST00000599833 CLEC9AQ6UXN8 241 aa16.46■□□□□ 0.23
SHKBP1-221ENST00000599833 Q6ZSR3 168 aa16.46■□□□□ 0.23
SHKBP1-221ENST00000599833 ZNF540Q8NDQ6 660 aa16.46■□□□□ 0.23
SHKBP1-221ENST00000599833 OR10H4Q8NGA5 316 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms