RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 TMEM104Q8NE00 496 aa12.68□□□□□ -0.38
VRK3-217ENST00000599538 NPRL2Q8WTW4 380 aa12.68□□□□□ -0.38
VRK3-217ENST00000599538 CPNE4Q96A23 557 aaPredicted RBP12.68□□□□□ -0.38
VRK3-217ENST00000599538 ZNF799Q96GE5 643 aa12.68□□□□□ -0.38
VRK3-217ENST00000599538 C1orf147Q96MC9 270 aaPredicted RBP12.68□□□□□ -0.38
VRK3-217ENST00000599538 TMEM38BQ9NVV0 291 aa12.68□□□□□ -0.38
VRK3-217ENST00000599538 ZNF222Q9UK12 451 aa12.68□□□□□ -0.38
VRK3-217ENST00000599538 ICMTO60725 284 aa12.68□□□□□ -0.38
VRK3-217ENST00000599538 NDUFB6O95139 128 aa12.68□□□□□ -0.38
VRK3-217ENST00000599538 HPNP05981 417 aa12.68□□□□□ -0.38
VRK3-217ENST00000599538 FTH1P19P0C7X4 201 aa12.68□□□□□ -0.38
VRK3-217ENST00000599538 ZP1P60852 638 aa12.68□□□□□ -0.38
VRK3-217ENST00000599538 CDK10Q15131 360 aa12.68□□□□□ -0.38
VRK3-217ENST00000599538 C3AR1Q16581 482 aa12.68□□□□□ -0.38
VRK3-217ENST00000599538 AWAT2Q6E213 333 aa12.68□□□□□ -0.38
VRK3-217ENST00000599538 SLC25A25Q6KCM7 469 aa12.68□□□□□ -0.38
VRK3-217ENST00000599538 PIAS4Q8N2W9 510 aaPredicted RBP12.68□□□□□ -0.38
VRK3-217ENST00000599538 AKR7LQ8NHP1 331 aa12.68□□□□□ -0.38
VRK3-217ENST00000599538 TMEM246Q9BRR3 403 aa12.68□□□□□ -0.38
VRK3-217ENST00000599538 NICN1Q9BSH3 213 aa12.68□□□□□ -0.38
VRK3-217ENST00000599538 ARGFXA6NJG6 315 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 PYCARD-AS1I3L0S3 204 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 FAHP16930 419 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 ZNF32P17041 273 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 CD276Q5ZPR3 534 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 GLRX5Q86SX6 157 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 VASH2Q86V25 355 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 GPR137CQ8N3F9 429 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 GALNT16Q8N428 558 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 OR51S1Q8NGJ8 323 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 UQCC2Q9BRT2 126 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 ACTR6Q9GZN1 396 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 ABI3Q9P2A4 366 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 KLK13Q9UKR3 277 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 RAB22AQ9UL26 194 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 DOCK7Q96N67 2140 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 AKR7A2O43488 359 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 SGCEO43556 437 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 SYNGR3O43761 229 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 SP1P08047 785 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 CSF1P09603 554 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 CRYGSP22914 178 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 ZNF260Q3ZCT1 412 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 TSPO2Q5TGU0 170 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 LAMTOR1Q6IAA8 161 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 GLIPR1L1Q6UWM5 242 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 ZNF782Q6ZMW2 699 aaPredicted RBP12.67□□□□□ -0.38
VRK3-217ENST00000599538 MDS2Q8NDY4 140 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 OR5D18Q8NGL1 313 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 OR2AE1Q8NHA4 323 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 CPT1CQ8TCG5 803 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 SSC4DQ8WTU2 575 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 PTX4Q96A99 478 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 FOXB1Q99853 325 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 GPR35Q9HC97 309 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 CSAG2Q9Y5P2 127 aa12.67□□□□□ -0.38
VRK3-217ENST00000599538 A0A0A6YYD4 124 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 TMEM14DPA8MWL7 114 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 M0QYG6 137 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 TNFRSF10AO00220 468 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 SSNA1O43805 119 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 BPNT1O95861 308 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 LPLP06858 475 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 HCKP08631 526 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 SULT1A3P0DMM9 295 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 SULT1A4P0DMN0 295 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 VSIG10L2P0DP72 767 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 RAB6AP20340 208 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 MEOX1P50221 254 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 SNRPD2P62316 118 aaKnown RBP12.66□□□□□ -0.38
VRK3-217ENST00000599538 PLGLB1Q02325 96 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 UBE2V2Q15819 145 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 SLC22A6Q4U2R8 563 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 STEAP1BQ6NZ63 245 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 C1QL2Q7Z5L3 287 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 LIX1LQ8IVB5 337 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 ZNF101Q8IZC7 436 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 SLC7A5P1Q8MH63 180 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 GABRG1Q8N1C3 465 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 OR4S1Q8NGB4 309 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 OR52B4Q8NGK2 314 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 FER1L6-AS2Q96M78 137 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 BANF2Q9H503 90 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 LIPGQ9Y5X9 500 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 FRYQ5TBA9 3013 aa12.66□□□□□ -0.38
VRK3-217ENST00000599538 RIF1Q5UIP0 2472 aaKnown RBP12.66□□□□□ -0.38
VRK3-217ENST00000599538 A0A0U1RQV5 110 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 ZNHIT1O43257 154 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 AKAIN1P0CW23 69 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 GNB3P16520 340 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 ZNF708P17019 499 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 ERP29P30040 261 aaKnown RBP12.65□□□□□ -0.38
VRK3-217ENST00000599538 FOXG1P55316 489 aaPredicted RBP12.65□□□□□ -0.38
VRK3-217ENST00000599538 PSG4Q00888 419 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 C9orf135Q5VTT2 229 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 PGAP1Q75T13 922 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 SKA3Q8IX90 412 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 GVQW1Q8N7I0 195 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 CHST4Q8NCG5 386 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 OR11H4Q8NGC9 324 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms