RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 TUSC5Q8IXB3 177 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 OR5AS1Q8N127 324 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 OR14K1Q8NGZ2 314 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 FOXRED1Q96CU9 486 aaPredicted RBP14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 ZNF799Q96GE5 643 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 SORCS2Q96PQ0 1159 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 SPACA5Q96QH8 159 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 CACNG6Q9BXT2 260 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 HRASLSQ9HDD0 168 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 DIABLOQ9NR28 239 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 SGCEO43556 437 aa14.92□□□□□ -0.02
SHKBP1-216ENST00000598201 SYNGR3O43761 229 aa14.92□□□□□ -0.02
SHKBP1-216ENST00000598201 TPPPO94811 219 aa14.92□□□□□ -0.02
SHKBP1-216ENST00000598201 GABRA1P14867 456 aa14.92□□□□□ -0.02
SHKBP1-216ENST00000598201 ZNF32P17041 273 aa14.92□□□□□ -0.02
SHKBP1-216ENST00000598201 CRYGSP22914 178 aa14.92□□□□□ -0.02
SHKBP1-216ENST00000598201 GUCA2AQ02747 115 aa14.92□□□□□ -0.02
SHKBP1-216ENST00000598201 SFRP5Q5T4F7 317 aa14.92□□□□□ -0.02
SHKBP1-216ENST00000598201 SLC22A24Q8N4F4 322 aa14.92□□□□□ -0.02
SHKBP1-216ENST00000598201 FDCSPQ8NFU4 85 aa14.92□□□□□ -0.02
SHKBP1-216ENST00000598201 C7orf50Q9BRJ6 194 aaKnown RBP14.92□□□□□ -0.02
SHKBP1-216ENST00000598201 ACKR4Q9NPB9 350 aa14.92□□□□□ -0.02
SHKBP1-216ENST00000598201 POU2F3Q9UKI9 436 aa14.92□□□□□ -0.02
SHKBP1-216ENST00000598201 ANKRD20A5PA0PJZ0 165 aa14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 CDK2AP1O14519 115 aa14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 MRPL33O75394 65 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 SYNGR4O95473 234 aa14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 TRAPPC2P0DI81 140 aa14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 TRAPPC2BP0DI82 140 aa14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 TNFSF10P50591 281 aa14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 NKX2-5P52952 324 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 UCNP55089 124 aa14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 HGFACQ04756 655 aa14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 RAB35Q15286 201 aa14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 DMRTC1Q5HYR2 192 aa14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 FAM109AQ8N4B1 249 aa14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 AKR7LQ8NHP1 331 aa14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 C15orf40Q8WUR7 153 aa14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 METTL17Q9H7H0 456 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 CALHM2Q9HA72 323 aa14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 SLC7A10Q9NS82 523 aa14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 PAQR5Q9NXK6 330 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 ANKRD11Q6UB99 2663 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 TMPRSS3P57727 454 aa14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 BTG1P62324 171 aa14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 PMP22Q01453 160 aa14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 SNAI3Q3KNW1 292 aa14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 MOGAT2Q3SYC2 334 aa14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 SFRP4Q6FHJ7 346 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 SKA3Q8IX90 412 aa14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 BEX2Q9BXY8 128 aa14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 SLCO5A1Q9H2Y9 848 aa14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 ZNF221Q9UK13 617 aa14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 MCTS1Q9ULC4 181 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-216ENST00000598201 A0A0U1RQV5 110 aa14.9□□□□□ -0.02
SHKBP1-216ENST00000598201 K7ENP7 123 aa14.9□□□□□ -0.02
SHKBP1-216ENST00000598201 ECDO95905 644 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-216ENST00000598201 PSG4Q00888 419 aa14.9□□□□□ -0.02
SHKBP1-216ENST00000598201 THOC7Q6I9Y2 204 aaKnown RBP14.9□□□□□ -0.02
SHKBP1-216ENST00000598201 FAAP20Q6NZ36 180 aa14.9□□□□□ -0.02
SHKBP1-216ENST00000598201 INO80CQ6PI98 192 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-216ENST00000598201 PAQR4Q8N4S7 273 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-216ENST00000598201 OR1F12Q8NHA8 337 aa14.9□□□□□ -0.02
SHKBP1-216ENST00000598201 SPTSSAQ969W0 71 aa14.9□□□□□ -0.02
SHKBP1-216ENST00000598201 PHF21AQ96BD5 680 aa14.9□□□□□ -0.02
SHKBP1-216ENST00000598201 SPRR3Q9UBC9 169 aa14.9□□□□□ -0.02
SHKBP1-216ENST00000598201 NUBP2Q9Y5Y2 271 aa14.9□□□□□ -0.02
SHKBP1-216ENST00000598201 FREM1Q5H8C1 2179 aa14.9□□□□□ -0.02
SHKBP1-216ENST00000598201 ACACBO00763 2458 aa14.9□□□□□ -0.02
SHKBP1-216ENST00000598201 IGKV1-9A0A0C4DH69 117 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 H7C417 338 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 ALDOBP05062 364 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 NAT1P18440 290 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 ZNF93P35789 620 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 QRFPP83859 136 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 SCRN3Q0VDG4 424 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 UNC119Q13432 240 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 TMEM178AQ8NBL3 297 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 CNTNAP3BQ96NU0 1288 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 UQCC2Q9BRT2 126 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 CNTNAP3Q9BZ76 1288 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 PRRG4Q9BZD6 226 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 WNT5BQ9H1J7 359 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 MTFP1Q9UDX5 166 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 TPRP12270 2363 aaKnown RBP14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 MEIS3P1A6NDR6 274 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 OR6C6A6NF89 314 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 ACTL6AO96019 429 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 FOXG1P55316 489 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 AP3S2P59780 193 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 PMPCAQ10713 525 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 PGAP1Q75T13 922 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 UTS2BQ765I0 119 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 ZNF627Q7L945 461 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 SLC16A14Q7RTX9 510 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 RNF170Q96K19 258 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 DMRTB1Q96MA1 342 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 OR2H1Q9GZK4 316 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 LDAHQ9H6V9 325 aa14.89□□□□□ -0.03
SHKBP1-216ENST00000598201 BCO1Q9HAY6 547 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms