RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 REEP6Q96HR9 211 aa19.22■□□□□ 0.67
IRF3-220ENST00000598108 CNN2Q99439 309 aaKnown RBP19.22■□□□□ 0.67
IRF3-220ENST00000598108 SLC29A1Q99808 456 aa19.22■□□□□ 0.67
IRF3-220ENST00000598108 TTTY10Q9BZA0 68 aa19.22■□□□□ 0.67
IRF3-220ENST00000598108 OR10A2Q9H208 303 aa19.22■□□□□ 0.67
IRF3-220ENST00000598108 ZNF665Q9H7R5 613 aa19.22■□□□□ 0.67
IRF3-220ENST00000598108 LPAR2Q9HBW0 351 aa19.22■□□□□ 0.67
IRF3-220ENST00000598108 TMEM160Q9NX00 188 aa19.22■□□□□ 0.67
IRF3-220ENST00000598108 TMEM178BH3BS89 294 aa19.21■□□□□ 0.67
IRF3-220ENST00000598108 IGHV2-70P01814 119 aa19.21■□□□□ 0.67
IRF3-220ENST00000598108 SBK2P0C263 348 aa19.21■□□□□ 0.67
IRF3-220ENST00000598108 TIGD6Q17RP2 521 aa19.21■□□□□ 0.67
IRF3-220ENST00000598108 MOGAT3Q86VF5 341 aa19.21■□□□□ 0.67
IRF3-220ENST00000598108 OR8J1Q8NGP2 316 aa19.21■□□□□ 0.67
IRF3-220ENST00000598108 DVL3Q92997 716 aaPredicted RBP19.21■□□□□ 0.67
IRF3-220ENST00000598108 PGAM5Q96HS1 289 aa19.21■□□□□ 0.67
IRF3-220ENST00000598108 OPA3Q9H6K4 179 aa19.21■□□□□ 0.67
IRF3-220ENST00000598108 SP140LQ9H930 580 aa19.21■□□□□ 0.67
IRF3-220ENST00000598108 HAO2Q9NYQ3 351 aa19.21■□□□□ 0.67
IRF3-220ENST00000598108 MRPL15Q9P015 296 aaKnown RBP19.21■□□□□ 0.67
IRF3-220ENST00000598108 hCG_38984A0A1B0GV85 526 aa19.2■□□□□ 0.66
IRF3-220ENST00000598108 ISPDA4D126 451 aa19.2■□□□□ 0.66
IRF3-220ENST00000598108 B4DSR2 109 aa19.2■□□□□ 0.66
IRF3-220ENST00000598108 MAGEB4O15481 346 aaPredicted RBP19.2■□□□□ 0.66
IRF3-220ENST00000598108 IGHV2-5P01817 119 aa19.2■□□□□ 0.66
IRF3-220ENST00000598108 PSMA6P60900 246 aaKnown RBP19.2■□□□□ 0.66
IRF3-220ENST00000598108 ROM1Q03395 351 aa19.2■□□□□ 0.66
IRF3-220ENST00000598108 OR8G1Q15617 311 aa19.2■□□□□ 0.66
IRF3-220ENST00000598108 GFOD2Q3B7J2 385 aa19.2■□□□□ 0.66
IRF3-220ENST00000598108 DEGS2Q6QHC5 323 aa19.2■□□□□ 0.66
IRF3-220ENST00000598108 PEG10Q86TG7 708 aaKnown RBP19.2■□□□□ 0.66
IRF3-220ENST00000598108 GID4Q8IVV7 300 aa19.2■□□□□ 0.66
IRF3-220ENST00000598108 SLC35F2Q8IXU6 374 aa19.2■□□□□ 0.66
IRF3-220ENST00000598108 EME1Q96AY2 570 aa19.2■□□□□ 0.66
IRF3-220ENST00000598108 LYZL4Q96KX0 146 aa19.2■□□□□ 0.66
IRF3-220ENST00000598108 OR8B4Q96RC9 309 aa19.2■□□□□ 0.66
IRF3-220ENST00000598108 MBOAT4Q96T53 435 aa19.2■□□□□ 0.66
IRF3-220ENST00000598108 BAG2O95816 211 aa19.19■□□□□ 0.66
IRF3-220ENST00000598108 HTR1FP30939 366 aa19.19■□□□□ 0.66
IRF3-220ENST00000598108 CD200P41217 278 aa19.19■□□□□ 0.66
IRF3-220ENST00000598108 GSK3AP49840 483 aa19.19■□□□□ 0.66
IRF3-220ENST00000598108 ZMYND11Q15326 602 aa19.19■□□□□ 0.66
IRF3-220ENST00000598108 MPPED2Q15777 294 aa19.19■□□□□ 0.66
IRF3-220ENST00000598108 CHRFAM7AQ494W8 412 aa19.19■□□□□ 0.66
IRF3-220ENST00000598108 KCTD18Q6PI47 426 aaPredicted RBP19.19■□□□□ 0.66
IRF3-220ENST00000598108 IL17RELQ6ZVW7 336 aa19.19■□□□□ 0.66
IRF3-220ENST00000598108 LRRC28Q86X40 367 aaPredicted RBP19.19■□□□□ 0.66
IRF3-220ENST00000598108 OR8B12Q8NGG6 310 aa19.19■□□□□ 0.66
IRF3-220ENST00000598108 ASB17Q8WXJ9 295 aa19.19■□□□□ 0.66
IRF3-220ENST00000598108 HRASLS5Q96KN8 279 aa19.19■□□□□ 0.66
IRF3-220ENST00000598108 GAL3ST1Q99999 423 aa19.19■□□□□ 0.66
IRF3-220ENST00000598108 SLC22A4Q9H015 551 aa19.19■□□□□ 0.66
IRF3-220ENST00000598108 PPP1R3EQ9H7J1 279 aa19.19■□□□□ 0.66
IRF3-220ENST00000598108 NIPAL2Q9H841 368 aa19.19■□□□□ 0.66
IRF3-220ENST00000598108 FAM206AQ9NX38 181 aa19.19■□□□□ 0.66
IRF3-220ENST00000598108 WARS2Q9UGM6 360 aaKnown RBP19.19■□□□□ 0.66
IRF3-220ENST00000598108 ORC6Q9Y5N6 252 aa19.19■□□□□ 0.66
IRF3-220ENST00000598108 TMEM14AQ9Y6G1 99 aa19.19■□□□□ 0.66
IRF3-220ENST00000598108 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.19■□□□□ 0.664e-20■■■■□ 23.4
IRF3-220ENST00000598108 GMDSO60547 372 aa19.18■□□□□ 0.66
IRF3-220ENST00000598108 ZNF205O95201 554 aa19.18■□□□□ 0.66
IRF3-220ENST00000598108 APOL3O95236 402 aa19.18■□□□□ 0.66
IRF3-220ENST00000598108 CYB5R3P00387 301 aaPredicted RBP19.18■□□□□ 0.66
IRF3-220ENST00000598108 MSMBP08118 114 aa19.18■□□□□ 0.66
IRF3-220ENST00000598108 DDOSTP39656 456 aa19.18■□□□□ 0.66
IRF3-220ENST00000598108 GATA4P43694 442 aa19.18■□□□□ 0.66
IRF3-220ENST00000598108 RAD23AP54725 363 aa19.18■□□□□ 0.66
IRF3-220ENST00000598108 DVL1P1P54792 670 aaPredicted RBP19.18■□□□□ 0.66
IRF3-220ENST00000598108 CDC42P60953 191 aa19.18■□□□□ 0.66
IRF3-220ENST00000598108 CXCR4P61073 352 aa19.18■□□□□ 0.66
IRF3-220ENST00000598108 CR1LQ2VPA4 569 aa19.18■□□□□ 0.66
IRF3-220ENST00000598108 KRTAP21-3Q3LHN1 58 aa19.18■□□□□ 0.66
IRF3-220ENST00000598108 FAM120AOSQ5T036 256 aa19.18■□□□□ 0.66
IRF3-220ENST00000598108 PRAMEF6Q5VXH4 476 aa19.18■□□□□ 0.66
IRF3-220ENST00000598108 ZNF679Q8IYX0 411 aa19.18■□□□□ 0.66
IRF3-220ENST00000598108 CELF2-AS1Q8N7Q2 184 aa19.18■□□□□ 0.66
IRF3-220ENST00000598108 OR51G2Q8NGK0 314 aa19.18■□□□□ 0.66
IRF3-220ENST00000598108 FAM81AQ8TBF8 368 aa19.18■□□□□ 0.66
IRF3-220ENST00000598108 APOL4Q9BPW4 351 aa19.18■□□□□ 0.66
IRF3-220ENST00000598108 ADAT1Q9BUB4 502 aaKnown RBP19.18■□□□□ 0.66
IRF3-220ENST00000598108 C9orf16Q9BUW7 83 aa19.18■□□□□ 0.66
IRF3-220ENST00000598108 MROQ9BYG7 248 aa19.18■□□□□ 0.66
IRF3-220ENST00000598108 UFSP2Q9NUQ7 469 aa19.18■□□□□ 0.66
IRF3-220ENST00000598108 CLN6Q9NWW5 311 aa19.18■□□□□ 0.66
IRF3-220ENST00000598108 UBAP1Q9NZ09 502 aa19.18■□□□□ 0.66
IRF3-220ENST00000598108 CDC42EP3Q9UKI2 254 aa19.18■□□□□ 0.66
IRF3-220ENST00000598108 TMEM269A0A1B0GVZ9 245 aa19.17■□□□□ 0.66
IRF3-220ENST00000598108 BTG1P62324 171 aa19.17■□□□□ 0.66
IRF3-220ENST00000598108 FAM201AQ5SY85 155 aa19.17■□□□□ 0.66
IRF3-220ENST00000598108 ZNF322Q6U7Q0 402 aaPredicted RBP19.17■□□□□ 0.66
IRF3-220ENST00000598108 ZBTB49Q6ZSB9 765 aa19.17■□□□□ 0.66
IRF3-220ENST00000598108 SSX6Q7RTT6 188 aa19.17■□□□□ 0.66
IRF3-220ENST00000598108 PPP1R14AQ96A00 147 aa19.17■□□□□ 0.66
IRF3-220ENST00000598108 BEX2Q9BXY8 128 aa19.17■□□□□ 0.66
IRF3-220ENST00000598108 SHARPINQ9H0F6 387 aa19.17■□□□□ 0.66
IRF3-220ENST00000598108 RGCCQ9H4X1 137 aa19.17■□□□□ 0.66
IRF3-220ENST00000598108 IKZF2Q9UKS7 526 aa19.17■□□□□ 0.66
IRF3-220ENST00000598108 ANKRD30BLA7E2S9 258 aa19.16■□□□□ 0.66
IRF3-220ENST00000598108 ANKRD65E5RJM6 399 aa19.16■□□□□ 0.66
IRF3-220ENST00000598108 IFNL4K9M1U5 179 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms