RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 PRDX6P30041 224 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 OTX1P32242 354 aaPredicted RBP8.72□□□□□ -1.01
LSM4-205ENST00000597776 IFNGR2P38484 337 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 NPY4RP50391 375 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 PRKXP51817 358 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 ELF3P78545 371 aaPredicted RBP8.72□□□□□ -1.01
LSM4-205ENST00000597776 KCNJ8Q15842 424 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 MIDNQ504T8 468 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 PDLIM3Q53GG5 364 aaPredicted RBP8.72□□□□□ -1.01
LSM4-205ENST00000597776 HSP90B2PQ58FF3 399 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 CD276Q5ZPR3 534 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 DRAM2Q6UX65 266 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 DCXRQ7Z4W1 244 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 FAM90A1Q86YD7 464 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 ZDHHC21Q8IVQ6 265 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 FGFRL1Q8N441 504 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 OR8D4Q8NGM9 314 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 OR4F5Q8NH21 305 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 NSMCE2Q96MF7 247 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 WDFY2Q96P53 400 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 DDOQ99489 341 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 BTBD10Q9BSF8 475 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 COPS4Q9BT78 406 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 SLC22A4Q9H015 551 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 FAM107BQ9H098 131 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 IL1RAPQ9NPH3 570 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 NOX4Q9NPH5 578 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 CENPMQ9NSP4 180 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 PDP1Q9P0J1 537 aaPredicted RBP8.72□□□□□ -1.01
LSM4-205ENST00000597776 NOP16Q9Y3C1 178 aaKnown RBP8.72□□□□□ -1.01
LSM4-205ENST00000597776 CDH10Q9Y6N8 788 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 COMMD3-BMI1R4GMX3 469 aa8.72□□□□□ -1.01
LSM4-205ENST00000597776 TRAV38-1A0A0B4J264 116 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 IGHV1-69DA0A0B4J2H0 117 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 A0A1B0GW55 424 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 hCG_1807616A0A1W2PRN6 198 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 IGHV1-69P01742 117 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 DUX4L2P0CJ85 424 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 DUX4L3P0CJ86 424 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 DUX4L4P0CJ87 422 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 DUX4L5P0CJ88 424 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 DUX4L6P0CJ89 424 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 DUX4L7P0CJ90 424 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 CLUP10909 449 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 HSD17B1P14061 328 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 BPIFB3P59826 476 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 KRTAP10-3P60369 221 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 ZNF362Q5T0B9 420 aaPredicted RBP8.71□□□□□ -1.02
LSM4-205ENST00000597776 METTL11BQ5VVY1 283 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 BRICD5Q6PL45 260 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 DUX4L9Q6RFH8 374 aaPredicted RBP8.71□□□□□ -1.02
LSM4-205ENST00000597776 C17orf107Q6ZR85 190 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 BTN2A1Q7KYR7 527 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 WDR86Q86TI4 376 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 PDZD9Q8IXQ8 264 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 GCSAMQ8N6F7 178 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 PNLDC1Q8NA58 520 aaKnown RBP8.71□□□□□ -1.02
LSM4-205ENST00000597776 ZNF511Q8NB15 262 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 SLC37A3Q8NCC5 494 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 OR52L1Q8NGH7 329 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 OR2T4Q8NH00 348 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 GATAD2BQ8WXI9 593 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 LHX4Q969G2 390 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 SLAMF6Q96DU3 332 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 SIRPDQ9H106 197 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 BEX1Q9HBH7 125 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 ACOXLQ9NUZ1 547 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 MRPL15Q9P015 296 aaKnown RBP8.71□□□□□ -1.02
LSM4-205ENST00000597776 KIF17Q9P2E2 1029 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 DUX4Q9UBX2 424 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 CD300AQ9UGN4 299 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 LYVE1Q9Y5Y7 322 aa8.71□□□□□ -1.02
LSM4-205ENST00000597776 A0A0U1RQK1 487 aa8.7□□□□□ -1.02
LSM4-205ENST00000597776 DVL1O14640 695 aa8.7□□□□□ -1.02
LSM4-205ENST00000597776 NDUFA7O95182 113 aa8.7□□□□□ -1.02
LSM4-205ENST00000597776 SOX14O95416 240 aa8.7□□□□□ -1.02
LSM4-205ENST00000597776 IGHV4-59P01825 116 aa8.7□□□□□ -1.02
LSM4-205ENST00000597776 LIPFP07098 398 aa8.7□□□□□ -1.02
LSM4-205ENST00000597776 ENTPD1P49961 510 aa8.7□□□□□ -1.02
LSM4-205ENST00000597776 ARF6P62330 175 aa8.7□□□□□ -1.02
LSM4-205ENST00000597776 CSNK2BP67870 215 aa8.7□□□□□ -1.02
LSM4-205ENST00000597776 PRB3Q04118 309 aaPredicted RBP8.7□□□□□ -1.02
LSM4-205ENST00000597776 PPP1R8Q12972 351 aaKnown RBP8.7□□□□□ -1.02
LSM4-205ENST00000597776 CRMP1Q14194 572 aa8.7□□□□□ -1.02
LSM4-205ENST00000597776 TAF13Q15543 124 aa8.7□□□□□ -1.02
LSM4-205ENST00000597776 PCK2Q16822 640 aa8.7□□□□□ -1.02
LSM4-205ENST00000597776 SAMD4BQ5PRF9 694 aaKnown RBP8.7□□□□□ -1.02
LSM4-205ENST00000597776 OLFML2AQ68BL7 652 aa8.7□□□□□ -1.02
LSM4-205ENST00000597776 PGAM4Q8N0Y7 254 aa8.7□□□□□ -1.02
LSM4-205ENST00000597776 TMEM86BQ8N661 226 aa8.7□□□□□ -1.02
LSM4-205ENST00000597776 PLPP7Q8NBV4 271 aa8.7□□□□□ -1.02
LSM4-205ENST00000597776 OR4Q3Q8NH05 313 aa8.7□□□□□ -1.02
LSM4-205ENST00000597776 SSMEM1Q8WWF3 244 aa8.7□□□□□ -1.02
LSM4-205ENST00000597776 ST8SIA4Q92187 359 aa8.7□□□□□ -1.02
LSM4-205ENST00000597776 FAM71F1Q96KD3 344 aaPredicted RBP8.7□□□□□ -1.02
LSM4-205ENST00000597776 CDRT15Q96T59 188 aa8.7□□□□□ -1.02
LSM4-205ENST00000597776 KCNJ15Q99712 375 aa8.7□□□□□ -1.02
LSM4-205ENST00000597776 TRIM15Q9C019 465 aa8.7□□□□□ -1.02
LSM4-205ENST00000597776 PPP1R3EQ9H7J1 279 aa8.7□□□□□ -1.02
LSM4-205ENST00000597776 TRIM36Q9NQ86 728 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms