RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 ZNF69Q9UC07 566 aa12.71□□□□□ -0.37
TGFB1-202ENST00000597453 AUP1Q9Y679 476 aa12.71□□□□□ -0.37
TGFB1-202ENST00000597453 TVP23AA6NH52 213 aa12.7□□□□□ -0.38
TGFB1-202ENST00000597453 SAC3D1A6NKF1 404 aa12.7□□□□□ -0.38
TGFB1-202ENST00000597453 F5H5P2 479 aa12.7□□□□□ -0.38
TGFB1-202ENST00000597453 PRODHO43272 600 aa12.7□□□□□ -0.38
TGFB1-202ENST00000597453 GLCEO94923 617 aa12.7□□□□□ -0.38
TGFB1-202ENST00000597453 CYB5R3P00387 301 aaPredicted RBP12.7□□□□□ -0.38
TGFB1-202ENST00000597453 SELEP16581 610 aa12.7□□□□□ -0.38
TGFB1-202ENST00000597453 ENTPD1P49961 510 aa12.7□□□□□ -0.38
TGFB1-202ENST00000597453 ARMCX4Q5H9R4 360 aa12.7□□□□□ -0.38
TGFB1-202ENST00000597453 TEX30Q5JUR7 227 aa12.7□□□□□ -0.38
TGFB1-202ENST00000597453 PLBD1Q6P4A8 553 aa12.7□□□□□ -0.38
TGFB1-202ENST00000597453 COLCA1Q6ZS62 124 aa12.7□□□□□ -0.38
TGFB1-202ENST00000597453 MUC20Q8N307 709 aaPredicted RBP12.7□□□□□ -0.38
TGFB1-202ENST00000597453 OR5L1Q8NGL2 311 aa12.7□□□□□ -0.38
TGFB1-202ENST00000597453 OR13G1Q8NGZ3 307 aa12.7□□□□□ -0.38
TGFB1-202ENST00000597453 OTULINQ96BN8 352 aa12.7□□□□□ -0.38
TGFB1-202ENST00000597453 MAP6Q96JE9 813 aa12.7□□□□□ -0.38
TGFB1-202ENST00000597453 ZNF582Q96NG8 517 aaPredicted RBP12.7□□□□□ -0.38
TGFB1-202ENST00000597453 ATF6BQ99941 703 aa12.7□□□□□ -0.38
TGFB1-202ENST00000597453 RBM4BQ9BQ04 359 aaKnown RBP12.7□□□□□ -0.38
TGFB1-202ENST00000597453 SLC30A2Q9BRI3 323 aa12.7□□□□□ -0.38
TGFB1-202ENST00000597453 C1QTNF5Q9BXJ0 243 aa12.7□□□□□ -0.38
TGFB1-202ENST00000597453 TMEM165Q9HC07 324 aa12.7□□□□□ -0.38
TGFB1-202ENST00000597453 S100A14Q9HCY8 104 aa12.7□□□□□ -0.38
TGFB1-202ENST00000597453 PNRC2Q9NPJ4 139 aaKnown RBP12.7□□□□□ -0.38
TGFB1-202ENST00000597453 NUP50Q9UKX7 468 aa12.7□□□□□ -0.38
TGFB1-202ENST00000597453 ZAR1LA6NP61 321 aa12.69□□□□□ -0.38
TGFB1-202ENST00000597453 IQCF6A8MYZ5 107 aa12.69□□□□□ -0.38
TGFB1-202ENST00000597453 HLA-DPB1P04440 258 aa12.69□□□□□ -0.38
TGFB1-202ENST00000597453 WNT2P09544 360 aa12.69□□□□□ -0.38
TGFB1-202ENST00000597453 ACSM4P0C7M7 580 aa12.69□□□□□ -0.38
TGFB1-202ENST00000597453 PSKH1P11801 424 aa12.69□□□□□ -0.38
TGFB1-202ENST00000597453 PMELP40967 661 aa12.69□□□□□ -0.38
TGFB1-202ENST00000597453 PAX2Q02962 417 aa12.69□□□□□ -0.38
TGFB1-202ENST00000597453 ECH1Q13011 328 aa12.69□□□□□ -0.38
TGFB1-202ENST00000597453 SNAPC1Q16533 368 aa12.69□□□□□ -0.38
TGFB1-202ENST00000597453 ESCO2Q56NI9 601 aa12.69□□□□□ -0.38
TGFB1-202ENST00000597453 AWAT1Q58HT5 328 aa12.69□□□□□ -0.38
TGFB1-202ENST00000597453 SLX4IPQ5VYV7 408 aa12.69□□□□□ -0.38
TGFB1-202ENST00000597453 DOK3Q7L591 496 aa12.69□□□□□ -0.38
TGFB1-202ENST00000597453 MOGAT3Q86VF5 341 aa12.69□□□□□ -0.38
TGFB1-202ENST00000597453 CPOQ8IVL8 374 aa12.69□□□□□ -0.38
TGFB1-202ENST00000597453 ZNF511Q8NB15 262 aa12.69□□□□□ -0.38
TGFB1-202ENST00000597453 C1orf147Q96MC9 270 aaPredicted RBP12.69□□□□□ -0.38
TGFB1-202ENST00000597453 ZNF48Q96MX3 618 aaPredicted RBP12.69□□□□□ -0.38
TGFB1-202ENST00000597453 DUX5Q96PT3 197 aa12.69□□□□□ -0.38
TGFB1-202ENST00000597453 PITX2Q99697 317 aa12.69□□□□□ -0.38
TGFB1-202ENST00000597453 GABARAPL3Q9BY60 117 aa12.69□□□□□ -0.38
TGFB1-202ENST00000597453 MARCH7Q9H992 704 aa12.69□□□□□ -0.38
TGFB1-202ENST00000597453 DDX28Q9NUL7 540 aaKnown RBP12.69□□□□□ -0.38
TGFB1-202ENST00000597453 TVP23BQ9NYZ1 205 aa12.69□□□□□ -0.38
TGFB1-202ENST00000597453 OR5V1Q9UGF6 321 aa12.69□□□□□ -0.38
TGFB1-202ENST00000597453 A0A1B0GWJ7 208 aa12.68□□□□□ -0.38
TGFB1-202ENST00000597453 IFNL4K9M1U5 179 aa12.68□□□□□ -0.38
TGFB1-202ENST00000597453 SPARCP09486 303 aa12.68□□□□□ -0.38
TGFB1-202ENST00000597453 RPS2P15880 293 aaKnown RBP12.68□□□□□ -0.38
TGFB1-202ENST00000597453 EGR1P18146 543 aa12.68□□□□□ -0.38
TGFB1-202ENST00000597453 SLC2A5P22732 501 aa12.68□□□□□ -0.38
TGFB1-202ENST00000597453 GSTT1P30711 240 aa12.68□□□□□ -0.38
TGFB1-202ENST00000597453 CD80P33681 288 aa12.68□□□□□ -0.38
TGFB1-202ENST00000597453 RPS27P42677 84 aaKnown RBP12.68□□□□□ -0.38
TGFB1-202ENST00000597453 SRP9P49458 86 aaKnown RBP12.68□□□□□ -0.38
TGFB1-202ENST00000597453 PAX8Q06710 450 aa12.68□□□□□ -0.38
TGFB1-202ENST00000597453 GK2Q14410 553 aaPredicted RBP12.68□□□□□ -0.38
TGFB1-202ENST00000597453 SLC35D3Q5M8T2 416 aa12.68□□□□□ -0.38
TGFB1-202ENST00000597453 FAM201AQ5SY85 155 aa12.68□□□□□ -0.38
TGFB1-202ENST00000597453 C12orf73Q69YU5 71 aa12.68□□□□□ -0.38
TGFB1-202ENST00000597453 NAA40Q86UY6 237 aa12.68□□□□□ -0.38
TGFB1-202ENST00000597453 KLBQ86Z14 1044 aa12.68□□□□□ -0.38
TGFB1-202ENST00000597453 OR10S1Q8NGN2 331 aa12.68□□□□□ -0.38
TGFB1-202ENST00000597453 INTS14Q96SY0 518 aa12.68□□□□□ -0.38
TGFB1-202ENST00000597453 MRI1Q9BV20 369 aa12.68□□□□□ -0.38
TGFB1-202ENST00000597453 SSBP3Q9BWW4 388 aaPredicted RBP12.68□□□□□ -0.38
TGFB1-202ENST00000597453 OR51V1Q9H2C8 321 aa12.68□□□□□ -0.38
TGFB1-202ENST00000597453 LRCH1Q9Y2L9 728 aa12.68□□□□□ -0.38
TGFB1-202ENST00000597453 IGHV3OR16-10A0A075B7F0 116 aa12.67□□□□□ -0.38
TGFB1-202ENST00000597453 DNAJC9-AS1A6NH13 148 aa12.67□□□□□ -0.38
TGFB1-202ENST00000597453 F5H5K5 113 aa12.67□□□□□ -0.38
TGFB1-202ENST00000597453 ZNF593O00488 134 aaPredicted RBP12.67□□□□□ -0.38
TGFB1-202ENST00000597453 ALPLP05186 524 aa12.67□□□□□ -0.38
TGFB1-202ENST00000597453 IGHV4-38-2P0DP08 117 aa12.67□□□□□ -0.38
TGFB1-202ENST00000597453 ANOS1P23352 680 aa12.67□□□□□ -0.38
TGFB1-202ENST00000597453 EPHA2P29317 976 aa12.67□□□□□ -0.38
TGFB1-202ENST00000597453 MAB21L1Q13394 359 aa12.67□□□□□ -0.38
TGFB1-202ENST00000597453 ZNF181Q2M3W8 571 aa12.67□□□□□ -0.38
TGFB1-202ENST00000597453 RBMS3Q6XE24 437 aaKnown RBP12.67□□□□□ -0.38
TGFB1-202ENST00000597453 DCXRQ7Z4W1 244 aa12.67□□□□□ -0.38
TGFB1-202ENST00000597453 ERI1Q8IV48 349 aaKnown RBP12.67□□□□□ -0.38
TGFB1-202ENST00000597453 TIGD4Q8IY51 512 aa12.67□□□□□ -0.38
TGFB1-202ENST00000597453 PQLC1Q8N2U9 271 aa12.67□□□□□ -0.38
TGFB1-202ENST00000597453 BBS1Q8NFJ9 593 aa12.67□□□□□ -0.38
TGFB1-202ENST00000597453 OR6N2Q8NGY6 317 aa12.67□□□□□ -0.38
TGFB1-202ENST00000597453 STMN2Q93045 179 aa12.67□□□□□ -0.38
TGFB1-202ENST00000597453 DACT3Q96B18 629 aaPredicted RBP12.67□□□□□ -0.38
TGFB1-202ENST00000597453 ZMYND19Q96E35 227 aaPredicted RBP12.67□□□□□ -0.38
TGFB1-202ENST00000597453 TMEM246Q9BRR3 403 aa12.67□□□□□ -0.38
TGFB1-202ENST00000597453 TMEM100Q9NV29 134 aa12.67□□□□□ -0.38
TGFB1-202ENST00000597453 USE1Q9NZ43 259 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms