RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 FTMTQ8N4E7 242 aa14.94□□□□□ -0.02
SHKBP1-204ENST00000594862 OTOSQ8NHW6 89 aa14.94□□□□□ -0.02
SHKBP1-204ENST00000594862 Q8TCH9 128 aa14.94□□□□□ -0.02
SHKBP1-204ENST00000594862 ZMYND19Q96E35 227 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-204ENST00000594862 FAHD2AQ96GK7 314 aa14.94□□□□□ -0.02
SHKBP1-204ENST00000594862 KRT84Q9NSB2 600 aa14.94□□□□□ -0.02
SHKBP1-204ENST00000594862 METRNQ9UJH8 293 aa14.94□□□□□ -0.02
SHKBP1-204ENST00000594862 LRCH1Q9Y2L9 728 aa14.94□□□□□ -0.02
SHKBP1-204ENST00000594862 AP4S1Q9Y587 144 aa14.94□□□□□ -0.02
SHKBP1-204ENST00000594862 OPRL1P41146 370 aa14.93□□□□□ -0.02
SHKBP1-204ENST00000594862 ESCO2Q56NI9 601 aa14.93□□□□□ -0.02
SHKBP1-204ENST00000594862 MOGAT3Q86VF5 341 aa14.93□□□□□ -0.02
SHKBP1-204ENST00000594862 OR2AE1Q8NHA4 323 aa14.93□□□□□ -0.02
SHKBP1-204ENST00000594862 ITFG2Q969R8 447 aa14.93□□□□□ -0.02
SHKBP1-204ENST00000594862 OSBPL10Q9BXB5 764 aa14.93□□□□□ -0.02
SHKBP1-204ENST00000594862 GABARAPL1Q9H0R8 117 aa14.93□□□□□ -0.02
SHKBP1-204ENST00000594862 OR10A2Q9H208 303 aa14.93□□□□□ -0.02
SHKBP1-204ENST00000594862 FN3KRPQ9HA64 309 aa14.93□□□□□ -0.02
SHKBP1-204ENST00000594862 C14orf119Q9NWQ9 140 aa14.93□□□□□ -0.02
SHKBP1-204ENST00000594862 ZNF391Q9UJN7 358 aa14.93□□□□□ -0.02
SHKBP1-204ENST00000594862 ANKRD30BLA7E2S9 258 aa14.92□□□□□ -0.02
SHKBP1-204ENST00000594862 A8MXK9 166 aa14.92□□□□□ -0.02
SHKBP1-204ENST00000594862 H0YL77 283 aa14.92□□□□□ -0.02
SHKBP1-204ENST00000594862 TBX1O43435 398 aa14.92□□□□□ -0.02
SHKBP1-204ENST00000594862 TCF21O43680 179 aa14.92□□□□□ -0.02
SHKBP1-204ENST00000594862 HLA-DPB1P04440 258 aa14.92□□□□□ -0.02
SHKBP1-204ENST00000594862 CA6P23280 308 aa14.92□□□□□ -0.02
SHKBP1-204ENST00000594862 KCNJ8Q15842 424 aa14.92□□□□□ -0.02
SHKBP1-204ENST00000594862 SPATC1Q76KD6 591 aa14.92□□□□□ -0.02
SHKBP1-204ENST00000594862 NLRC3Q7RTR2 1065 aa14.92□□□□□ -0.02
SHKBP1-204ENST00000594862 YIPF3Q9GZM5 350 aa14.92□□□□□ -0.02
SHKBP1-204ENST00000594862 TRIM36Q9NQ86 728 aa14.92□□□□□ -0.02
SHKBP1-204ENST00000594862 DCAF16Q9NXF7 216 aa14.92□□□□□ -0.02
SHKBP1-204ENST00000594862 TVP23BQ9NYZ1 205 aa14.92□□□□□ -0.02
SHKBP1-204ENST00000594862 MIOXQ9UGB7 285 aa14.92□□□□□ -0.02
SHKBP1-204ENST00000594862 POLR3KQ9Y2Y1 108 aaPredicted RBP14.92□□□□□ -0.02
SHKBP1-204ENST00000594862 TMEM14AQ9Y6G1 99 aa14.92□□□□□ -0.02
SHKBP1-204ENST00000594862 A0A0A6YYJ9 748 aa14.91□□□□□ -0.02
SHKBP1-204ENST00000594862 F5H0A9 414 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-204ENST00000594862 PTBP3O95758 552 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-204ENST00000594862 SLC2A1P11166 492 aa14.91□□□□□ -0.02
SHKBP1-204ENST00000594862 SLC2A5P22732 501 aa14.91□□□□□ -0.02
SHKBP1-204ENST00000594862 DAPP51397 102 aa14.91□□□□□ -0.02
SHKBP1-204ENST00000594862 PSMA6P60900 246 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-204ENST00000594862 PTGES3Q15185 160 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-204ENST00000594862 KCTD18Q6PI47 426 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-204ENST00000594862 SLC16A9Q7RTY1 509 aa14.91□□□□□ -0.02
SHKBP1-204ENST00000594862 CSNK2A3Q8NEV1 391 aa14.91□□□□□ -0.02
SHKBP1-204ENST00000594862 OR56B2PQ8NGI1 322 aa14.91□□□□□ -0.02
SHKBP1-204ENST00000594862 ZNF420Q8TAQ5 688 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-204ENST00000594862 THEM6Q8WUY1 208 aa14.91□□□□□ -0.02
SHKBP1-204ENST00000594862 REEP6Q96HR9 211 aa14.91□□□□□ -0.02
SHKBP1-204ENST00000594862 METTL17Q9H7H0 456 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-204ENST00000594862 ABCB9Q9NP78 766 aa14.91□□□□□ -0.02
SHKBP1-204ENST00000594862 OR5V1Q9UGF6 321 aa14.91□□□□□ -0.02
SHKBP1-204ENST00000594862 LAMP5Q9UJQ1 280 aa14.91□□□□□ -0.02
SHKBP1-204ENST00000594862 PPIAL4AQ9Y536 164 aa14.91□□□□□ -0.02
SHKBP1-204ENST00000594862 N6AMT1Q9Y5N5 214 aa14.91□□□□□ -0.02
SHKBP1-204ENST00000594862 CEACAM18A8MTB9 384 aa14.9□□□□□ -0.02
SHKBP1-204ENST00000594862 SELENOFO60613 162 aa14.9□□□□□ -0.02
SHKBP1-204ENST00000594862 RPS2P15880 293 aaKnown RBP14.9□□□□□ -0.02
SHKBP1-204ENST00000594862 PRSS12P56730 875 aa14.9□□□□□ -0.02
SHKBP1-204ENST00000594862 ZNF121P58317 390 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-204ENST00000594862 LCN2P80188 198 aa14.9□□□□□ -0.02
SHKBP1-204ENST00000594862 MAB21L1Q13394 359 aa14.9□□□□□ -0.02
SHKBP1-204ENST00000594862 APOFQ13790 326 aa14.9□□□□□ -0.02
SHKBP1-204ENST00000594862 ZNF404Q494X3 552 aa14.9□□□□□ -0.02
SHKBP1-204ENST00000594862 TMEM236Q5W0B7 351 aa14.9□□□□□ -0.02
SHKBP1-204ENST00000594862 DEGS2Q6QHC5 323 aa14.9□□□□□ -0.02
SHKBP1-204ENST00000594862 FAM57BQ71RH2 274 aa14.9□□□□□ -0.02
SHKBP1-204ENST00000594862 C1QL2Q7Z5L3 287 aa14.9□□□□□ -0.02
SHKBP1-204ENST00000594862 NANPQ8TBE9 248 aa14.9□□□□□ -0.02
SHKBP1-204ENST00000594862 ASB17Q8WXJ9 295 aa14.9□□□□□ -0.02
SHKBP1-204ENST00000594862 PGAM5Q96HS1 289 aa14.9□□□□□ -0.02
SHKBP1-204ENST00000594862 ACOD1A6NK06 481 aa14.89□□□□□ -0.03
SHKBP1-204ENST00000594862 SLC22A31A6NKX4 558 aa14.89□□□□□ -0.03
SHKBP1-204ENST00000594862 CYB5R3P00387 301 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-204ENST00000594862 GNALP38405 381 aa14.89□□□□□ -0.03
SHKBP1-204ENST00000594862 NAA10P41227 235 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-204ENST00000594862 SLX4IPQ5VYV7 408 aa14.89□□□□□ -0.03
SHKBP1-204ENST00000594862 KDM4DQ6B0I6 523 aa14.89□□□□□ -0.03
SHKBP1-204ENST00000594862 DCDC5Q6ZRR9 648 aa14.89□□□□□ -0.03
SHKBP1-204ENST00000594862 CCDC121Q6ZUS5 278 aa14.89□□□□□ -0.03
SHKBP1-204ENST00000594862 ZNF771Q7L3S4 317 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-204ENST00000594862 PRSS45Q7RTY3 260 aa14.89□□□□□ -0.03
SHKBP1-204ENST00000594862 KRT77Q7Z794 578 aa14.89□□□□□ -0.03
SHKBP1-204ENST00000594862 C10orf67Q8IYJ2 551 aa14.89□□□□□ -0.03
SHKBP1-204ENST00000594862 OR8S1Q8NH09 359 aa14.89□□□□□ -0.03
SHKBP1-204ENST00000594862 NEIL1Q96FI4 390 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-204ENST00000594862 CENPNQ96H22 339 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-204ENST00000594862 AMELYQ99218 206 aa14.89□□□□□ -0.03
SHKBP1-204ENST00000594862 MNTQ99583 582 aa14.89□□□□□ -0.03
SHKBP1-204ENST00000594862 TMPRSS13Q9BYE2 586 aa14.89□□□□□ -0.03
SHKBP1-204ENST00000594862 C7orf69Q9H7B7 122 aa14.89□□□□□ -0.03
SHKBP1-204ENST00000594862 DNAJC27Q9NZQ0 273 aa14.89□□□□□ -0.03
SHKBP1-204ENST00000594862 H2AFY2Q9P0M6 372 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-204ENST00000594862 RNF7Q9UBF6 113 aa14.89□□□□□ -0.03
SHKBP1-204ENST00000594862 hCG_38984A0A1B0GV85 526 aa14.88□□□□□ -0.03
SHKBP1-204ENST00000594862 PHYHO14832 338 aa14.88□□□□□ -0.03
SHKBP1-204ENST00000594862 FAM20BO75063 409 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms