RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 CPOQ8IVL8 374 aa12.82□□□□□ -0.36
TRIM28-203ENST00000593582 ZNF454Q8N9F8 522 aa12.82□□□□□ -0.36
TRIM28-203ENST00000593582 OR52H1Q8NGJ2 320 aa12.82□□□□□ -0.36
TRIM28-203ENST00000593582 NANPQ8TBE9 248 aa12.82□□□□□ -0.36
TRIM28-203ENST00000593582 Q8TCH9 128 aa12.82□□□□□ -0.36
TRIM28-203ENST00000593582 UTP4Q969X6 686 aaKnown RBP12.82□□□□□ -0.36
TRIM28-203ENST00000593582 C19orf24Q9BVV8 132 aa12.82□□□□□ -0.36
TRIM28-203ENST00000593582 FN3KRPQ9HA64 309 aa12.82□□□□□ -0.36
TRIM28-203ENST00000593582 NTN4Q9HB63 628 aa12.82□□□□□ -0.36
TRIM28-203ENST00000593582 TMEM165Q9HC07 324 aa12.82□□□□□ -0.36
TRIM28-203ENST00000593582 A0A0A6YYJ9 748 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 F5H0A9 414 aaPredicted RBP12.81□□□□□ -0.36
TRIM28-203ENST00000593582 LYNP07948 512 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 H2BFMP0C1H6 154 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 RPS2P15880 293 aaKnown RBP12.81□□□□□ -0.36
TRIM28-203ENST00000593582 ADRA2CP18825 462 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 EPHA1P21709 976 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 ANOS1P23352 680 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 DDOSTP39656 456 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 PMELP40967 661 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 OPRL1P41146 370 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 ZNF121P58317 390 aaPredicted RBP12.81□□□□□ -0.36
TRIM28-203ENST00000593582 SEC61A1P61619 476 aaKnown RBP12.81□□□□□ -0.36
TRIM28-203ENST00000593582 RPS7P62081 194 aaKnown RBP12.81□□□□□ -0.36
TRIM28-203ENST00000593582 MZT1Q08AG7 82 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 SNAPC1Q16533 368 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 SLC35D3Q5M8T2 416 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 TMEM236Q5W0B7 351 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 FAHD1Q6P587 224 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 KLBQ86Z14 1044 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.81□□□□□ -0.36
TRIM28-203ENST00000593582 SPERTQ8NA61 448 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 PLPP7Q8NBV4 271 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 OR56B2PQ8NGI1 322 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 OTOSQ8NHW6 89 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 THEM6Q8WUY1 208 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 SPSB4Q96A44 273 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 REEP6Q96HR9 211 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 AMELYQ99218 206 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 SLC25A19Q9HC21 320 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 UFSP2Q9NUQ7 469 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 DNAJC27Q9NZQ0 273 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 MIOXQ9UGB7 285 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 OR5V1Q9UGF6 321 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 LRCH1Q9Y2L9 728 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 POLR3KQ9Y2Y1 108 aaPredicted RBP12.81□□□□□ -0.36
TRIM28-203ENST00000593582 PPIAL4AQ9Y536 164 aa12.81□□□□□ -0.36
TRIM28-203ENST00000593582 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.8□□□□□ -0.36
TRIM28-203ENST00000593582 ANKRD30BLA7E2S9 258 aa12.8□□□□□ -0.36
TRIM28-203ENST00000593582 A8MXK9 166 aa12.8□□□□□ -0.36
TRIM28-203ENST00000593582 SELENOFO60613 162 aa12.8□□□□□ -0.36
TRIM28-203ENST00000593582 FAM20BO75063 409 aa12.8□□□□□ -0.36
TRIM28-203ENST00000593582 CFL1P23528 166 aaKnown RBP12.8□□□□□ -0.36
TRIM28-203ENST00000593582 DAPP51397 102 aa12.8□□□□□ -0.36
TRIM28-203ENST00000593582 CRISP1P54107 249 aa12.8□□□□□ -0.36
TRIM28-203ENST00000593582 MPPED2Q15777 294 aa12.8□□□□□ -0.36
TRIM28-203ENST00000593582 ATP6AP1Q15904 470 aa12.8□□□□□ -0.36
TRIM28-203ENST00000593582 ZNF404Q494X3 552 aa12.8□□□□□ -0.36
TRIM28-203ENST00000593582 C1orf146Q5VVC0 180 aa12.8□□□□□ -0.36
TRIM28-203ENST00000593582 PRAMEF6Q5VXH4 476 aa12.8□□□□□ -0.36
TRIM28-203ENST00000593582 FAM57BQ71RH2 274 aa12.8□□□□□ -0.36
TRIM28-203ENST00000593582 NLRC3Q7RTR2 1065 aa12.8□□□□□ -0.36
TRIM28-203ENST00000593582 SLC16A9Q7RTY1 509 aa12.8□□□□□ -0.36
TRIM28-203ENST00000593582 PARP8Q8N3A8 854 aa12.8□□□□□ -0.36
TRIM28-203ENST00000593582 BBS1Q8NFJ9 593 aa12.8□□□□□ -0.36
TRIM28-203ENST00000593582 OR5K1Q8NHB7 308 aa12.8□□□□□ -0.36
TRIM28-203ENST00000593582 ZNF418Q8TF45 676 aaPredicted RBP12.8□□□□□ -0.36
TRIM28-203ENST00000593582 TMEM246Q9BRR3 403 aa12.8□□□□□ -0.36
TRIM28-203ENST00000593582 OR10A2Q9H208 303 aa12.8□□□□□ -0.36
TRIM28-203ENST00000593582 MMP26Q9NRE1 261 aa12.8□□□□□ -0.36
TRIM28-203ENST00000593582 TVP23BQ9NYZ1 205 aa12.8□□□□□ -0.36
TRIM28-203ENST00000593582 OPN4Q9UHM6 478 aa12.8□□□□□ -0.36
TRIM28-203ENST00000593582 G3V2T6 193 aa12.79□□□□□ -0.36
TRIM28-203ENST00000593582 TRAPPC2LH3BP13 241 aa12.79□□□□□ -0.36
TRIM28-203ENST00000593582 PTBP3O95758 552 aaKnown RBP12.79□□□□□ -0.36
TRIM28-203ENST00000593582 WNT2P09544 360 aa12.79□□□□□ -0.36
TRIM28-203ENST00000593582 FASP25445 335 aa12.79□□□□□ -0.36
TRIM28-203ENST00000593582 NAA10P41227 235 aaPredicted RBP12.79□□□□□ -0.36
TRIM28-203ENST00000593582 GNB2P62879 340 aa12.79□□□□□ -0.36
TRIM28-203ENST00000593582 FAM3AP98173 230 aa12.79□□□□□ -0.36
TRIM28-203ENST00000593582 ZNF154Q13106 437 aa12.79□□□□□ -0.36
TRIM28-203ENST00000593582 APOFQ13790 326 aa12.79□□□□□ -0.36
TRIM28-203ENST00000593582 KCNJ8Q15842 424 aa12.79□□□□□ -0.36
TRIM28-203ENST00000593582 GFOD2Q3B7J2 385 aa12.79□□□□□ -0.36
TRIM28-203ENST00000593582 FAM201AQ5SY85 155 aa12.79□□□□□ -0.36
TRIM28-203ENST00000593582 PRSS45Q7RTY3 260 aa12.79□□□□□ -0.36
TRIM28-203ENST00000593582 DEFB108BQ8NET1 73 aa12.79□□□□□ -0.36
TRIM28-203ENST00000593582 DVL3Q92997 716 aaPredicted RBP12.79□□□□□ -0.36
TRIM28-203ENST00000593582 SGK3Q96BR1 496 aa12.79□□□□□ -0.36
TRIM28-203ENST00000593582 PGAM5Q96HS1 289 aa12.79□□□□□ -0.36
TRIM28-203ENST00000593582 SSBP3Q9BWW4 388 aaPredicted RBP12.79□□□□□ -0.36
TRIM28-203ENST00000593582 PRRG3Q9BZD7 231 aa12.79□□□□□ -0.36
TRIM28-203ENST00000593582 RGCCQ9H4X1 137 aa12.79□□□□□ -0.36
TRIM28-203ENST00000593582 BRD7Q9NPI1 651 aa12.79□□□□□ -0.36
TRIM28-203ENST00000593582 KRT84Q9NSB2 600 aa12.79□□□□□ -0.36
TRIM28-203ENST00000593582 C14orf119Q9NWQ9 140 aa12.79□□□□□ -0.36
TRIM28-203ENST00000593582 RNF7Q9UBF6 113 aa12.79□□□□□ -0.36
TRIM28-203ENST00000593582 LAMP5Q9UJQ1 280 aa12.79□□□□□ -0.36
TRIM28-203ENST00000593582 AP4S1Q9Y587 144 aa12.79□□□□□ -0.36
TRIM28-203ENST00000593582 GRPP07492 148 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms