RNA–Protein interactions for RNA: ENST00000592905.5

ERCC1-217, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, human

TSL 2

Gene ERCC1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC1-217	ENST00000592905	LRRC36	Q1X8D7	754 aa		12.8	□□□□□ -0.36
ERCC1-217	ENST00000592905	C6orf52	Q5T4I8	152 aa		12.8	□□□□□ -0.36
ERCC1-217	ENST00000592905	KCTD18	Q6PI47	426 aa	Predicted RBP	12.8	□□□□□ -0.36
ERCC1-217	ENST00000592905	RHOU	Q7L0Q8	258 aa		12.8	□□□□□ -0.36
ERCC1-217	ENST00000592905	GALNT4	Q8N4A0	578 aa		12.8	□□□□□ -0.36
ERCC1-217	ENST00000592905	OR56B2P	Q8NGI1	322 aa		12.8	□□□□□ -0.36
ERCC1-217	ENST00000592905	MEGF10	Q96KG7	1140 aa		12.8	□□□□□ -0.36
ERCC1-217	ENST00000592905	APOL4	Q9BPW4	351 aa		12.8	□□□□□ -0.36
ERCC1-217	ENST00000592905	OR10A2	Q9H208	303 aa		12.8	□□□□□ -0.36
ERCC1-217	ENST00000592905	IKZF2	Q9UKS7	526 aa		12.8	□□□□□ -0.36
ERCC1-217	ENST00000592905	PPP1R3C	Q9UQK1	317 aa		12.8	□□□□□ -0.36
ERCC1-217	ENST00000592905	WIPI2	Q9Y4P8	454 aa		12.8	□□□□□ -0.36
ERCC1-217	ENST00000592905	GMPPB	Q9Y5P6	360 aa		12.8	□□□□□ -0.36
ERCC1-217	ENST00000592905	LOC100289279	A0A1B0GTE1	492 aa		12.79	□□□□□ -0.36
ERCC1-217	ENST00000592905	ERICH4	A6NGS2	130 aa		12.79	□□□□□ -0.36
ERCC1-217	ENST00000592905	ENTPD6	O75354	484 aa		12.79	□□□□□ -0.36
ERCC1-217	ENST00000592905	ANPEP	P15144	967 aa		12.79	□□□□□ -0.36
ERCC1-217	ENST00000592905	HOXB4	P17483	251 aa	Predicted RBP	12.79	□□□□□ -0.36
ERCC1-217	ENST00000592905	HTR1F	P30939	366 aa		12.79	□□□□□ -0.36
ERCC1-217	ENST00000592905	RCN1	Q15293	331 aa		12.79	□□□□□ -0.36
ERCC1-217	ENST00000592905	OR8G1	Q15617	311 aa		12.79	□□□□□ -0.36
ERCC1-217	ENST00000592905	LPCAT4	Q643R3	524 aa		12.79	□□□□□ -0.36
ERCC1-217	ENST00000592905	ZNF322	Q6U7Q0	402 aa	Predicted RBP	12.79	□□□□□ -0.36
ERCC1-217	ENST00000592905	PLEKHG7	Q6ZR37	379 aa		12.79	□□□□□ -0.36
ERCC1-217	ENST00000592905	SSX6	Q7RTT6	188 aa		12.79	□□□□□ -0.36
ERCC1-217	ENST00000592905	MOGAT3	Q86VF5	341 aa		12.79	□□□□□ -0.36
ERCC1-217	ENST00000592905	OR52H1	Q8NGJ2	320 aa		12.79	□□□□□ -0.36
ERCC1-217	ENST00000592905	PPP1R14A	Q96A00	147 aa		12.79	□□□□□ -0.36
ERCC1-217	ENST00000592905	SPSB4	Q96A44	273 aa		12.79	□□□□□ -0.36
ERCC1-217	ENST00000592905	OR8B4	Q96RC9	309 aa		12.79	□□□□□ -0.36
ERCC1-217	ENST00000592905	MRO	Q9BYG7	248 aa		12.79	□□□□□ -0.36
ERCC1-217	ENST00000592905	PPP1R3E	Q9H7J1	279 aa		12.79	□□□□□ -0.36
ERCC1-217	ENST00000592905	SP140L	Q9H930	580 aa		12.79	□□□□□ -0.36
ERCC1-217	ENST00000592905	GCM1	Q9NP62	436 aa		12.79	□□□□□ -0.36
ERCC1-217	ENST00000592905	TMEM106B	Q9NUM4	274 aa		12.79	□□□□□ -0.36
ERCC1-217	ENST00000592905	CLN6	Q9NWW5	311 aa		12.79	□□□□□ -0.36
ERCC1-217	ENST00000592905	HAO2	Q9NYQ3	351 aa		12.79	□□□□□ -0.36
ERCC1-217	ENST00000592905	WARS2	Q9UGM6	360 aa	Known RBP	12.79	□□□□□ -0.36
ERCC1-217	ENST00000592905	TMEM14A	Q9Y6G1	99 aa		12.79	□□□□□ -0.36
ERCC1-217	ENST00000592905	WNK2	Q9Y3S1	2297 aa		12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	MXRA5	Q9NR99	2828 aa		12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	TMEM269	A0A1B0GVZ9	245 aa		12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	ISPD	A4D126	451 aa		12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905		A8MV72	311 aa	Predicted RBP	12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	FAM157A	C9JC47	383 aa		12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	ZNF670-ZNF695	F2Z2N8	137 aa		12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	ZNF205	O95201	554 aa		12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	TGFA	P01135	160 aa		12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	ATP6V1E1	P36543	226 aa		12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	SRP9	P49458	86 aa	Known RBP	12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	GSK3A	P49840	483 aa		12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	PSMA6	P60900	246 aa	Known RBP	12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	LMO4	P61968	165 aa		12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	MAB21L1	Q13394	359 aa		12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	PRAMEF6	Q5VXH4	476 aa		12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	ZNF679	Q8IYX0	411 aa		12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	OR10H4	Q8NGA5	316 aa		12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	OR8B12	Q8NGG6	310 aa		12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	TRUB1	Q8WWH5	349 aa	Known RBP	12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	ASB17	Q8WXJ9	295 aa		12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	RAB1C	Q92928	201 aa		12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	TIMD4	Q96H15	378 aa		12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	LYZL4	Q96KX0	146 aa		12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	ADAT1	Q9BUB4	502 aa	Known RBP	12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	LPAR2	Q9HBW0	351 aa		12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	UFSP2	Q9NUQ7	469 aa		12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	FAM118A	Q9NWS6	357 aa		12.78	□□□□□ -0.36
ERCC1-217	ENST00000592905	LOC100130705	A0A1B0GUX0	176 aa		12.77	□□□□□ -0.37
ERCC1-217	ENST00000592905	hCG_38984	A0A1B0GV85	526 aa		12.77	□□□□□ -0.37
ERCC1-217	ENST00000592905		A0A1B0GWJ7	208 aa		12.77	□□□□□ -0.37
ERCC1-217	ENST00000592905	CYB5R3	P00387	301 aa	Predicted RBP	12.77	□□□□□ -0.37
ERCC1-217	ENST00000592905	PMEL	P40967	661 aa		12.77	□□□□□ -0.37
ERCC1-217	ENST00000592905	RIDA	P52758	137 aa	Known RBP	12.77	□□□□□ -0.37
ERCC1-217	ENST00000592905	RIPPLY3	P57055	190 aa		12.77	□□□□□ -0.37
ERCC1-217	ENST00000592905	SNRPG	P62308	76 aa	Known RBP	12.77	□□□□□ -0.37
ERCC1-217	ENST00000592905	ROM1	Q03395	351 aa		12.77	□□□□□ -0.37
ERCC1-217	ENST00000592905	MFGE8	Q08431	387 aa	Predicted RBP	12.77	□□□□□ -0.37
ERCC1-217	ENST00000592905	MPPED2	Q15777	294 aa		12.77	□□□□□ -0.37
ERCC1-217	ENST00000592905	DEGS2	Q6QHC5	323 aa		12.77	□□□□□ -0.37
ERCC1-217	ENST00000592905	HPS1	Q92902	700 aa		12.77	□□□□□ -0.37
ERCC1-217	ENST00000592905	RFK	Q969G6	155 aa		12.77	□□□□□ -0.37
ERCC1-217	ENST00000592905	OPA3	Q9H6K4	179 aa		12.77	□□□□□ -0.37
ERCC1-217	ENST00000592905	NIPAL2	Q9H841	368 aa		12.77	□□□□□ -0.37
ERCC1-217	ENST00000592905	FAM206A	Q9NX38	181 aa		12.77	□□□□□ -0.37
ERCC1-217	ENST00000592905	MRM2	Q9UI43	246 aa	Known RBP	12.77	□□□□□ -0.37
ERCC1-217	ENST00000592905	GTF2A1L	Q9UNN4	478 aa		12.77	□□□□□ -0.37
ERCC1-217	ENST00000592905	NPTN	Q9Y639	398 aa		12.77	□□□□□ -0.37
ERCC1-217	ENST00000592905		A0A1W2PQL4	384 aa	Predicted RBP	12.76	□□□□□ -0.37
ERCC1-217	ENST00000592905	ANKRD30BL	A7E2S9	258 aa		12.76	□□□□□ -0.37
ERCC1-217	ENST00000592905	DLGAP1	O14490	977 aa		12.76	□□□□□ -0.37
ERCC1-217	ENST00000592905	ZNF254	O75437	659 aa		12.76	□□□□□ -0.37
ERCC1-217	ENST00000592905	RPP14	O95059	124 aa	Known RBP	12.76	□□□□□ -0.37
ERCC1-217	ENST00000592905	PNP	P00491	289 aa		12.76	□□□□□ -0.37
ERCC1-217	ENST00000592905	PEX2	P28328	305 aa		12.76	□□□□□ -0.37
ERCC1-217	ENST00000592905	MMP16	P51512	607 aa		12.76	□□□□□ -0.37
ERCC1-217	ENST00000592905	HOXA4	Q00056	320 aa	Predicted RBP	12.76	□□□□□ -0.37
ERCC1-217	ENST00000592905	SLC3A1	Q07837	685 aa		12.76	□□□□□ -0.37
ERCC1-217	ENST00000592905	FAM201A	Q5SY85	155 aa		12.76	□□□□□ -0.37
ERCC1-217	ENST00000592905	PEG10	Q86TG7	708 aa	Known RBP	12.76	□□□□□ -0.37
ERCC1-217	ENST00000592905	ENTHD1	Q8IYW4	607 aa		12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms